CuGenDBv2

Gene ID	HG10015488
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	Chr02:27079263..27081734
RNA-Seq Expression	HG10015488
Synteny	HG10015488
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001268 - NADH:ubiquinone oxidoreductase, 30kDa subunit IPR020396 - NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site IPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88883.1 NADH-plastoquinone oxidoreductase subunit J [Lagenaria siceraria]

8.6e-77

98.55

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFA RINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

ALO21898.1 NdhJ [Cucurbita cordata]

2.9e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

2.9e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

YP_009325992.1 NADH dehydrogenase subunit J [Citrullus lanatus]

8.6e-77

98.55

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERES+DMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

YP_009751741.1 NADH dehydrogenase subunit J [Herpetospermum pedunculosum]

6.6e-77

98.55

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKP+EWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IF70 NADH-quinone oxidoreductase subunit C

1.4e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

A0A109WWM6 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.4e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

A0A2Z2CGF1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.4e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

A0A6H0EQB7 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.4e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

X2F417 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.4e-77

99.28

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

SwissProt top hits

e value

%identity

Alignment

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-77

95.65

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGHLS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESWI
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

P31174 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.7e-75

92.03

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LSSWLVKHGL+HRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTR+EYGIDQPEEVCIK+F AR NPRIPS+
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADF E+ESYDMLGISYDNHPRL+RILMPESWI
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

Q0ZJ17 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.0e-76

94.93

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESWI
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.2e-78

97.83

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADFPERESYDMLGI YDNHPRLKRILMPESW+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

Q9M3M1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

9.8e-76

94.2

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKSADF ERESYDM GISYDNHPRLKRILMPESWI
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

5.2e-72

89.13

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Query:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG++Q EEVCIKVF  R NPRIPSV
Subjt:  MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI
        FWVWKS DF ERESYDMLGI+YD+HPRLKRILMPESWI
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGGGTCATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCA
TTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAA
TCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCA
GAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGATACAAGGAAATGATTCAGTTCCAAAGCC
AAAGATCGTAATTCTCGAACGAGCAATCGAAAAGATTCTGGAGTATCCTCAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTG
ATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCCTTTTGCTCCTCAGCGTACGGGGTATTAGCAGCCGTT
TCCCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGA

mRNA sequence

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Protein sequence

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MQGHLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFP
ERESYDMLGISYDNHPRLKRILMPESWIQGNDSVPKPKIVILERAIEKILEYPQESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQTRAPPRADSSFCSSAYGVLAAV
SRGIDGDSQISQNRI

HG10015488 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome