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HG10015621 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015621
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectinesterase
Genome locationChr02:28208473..28209899
RNA-Seq ExpressionHG10015621
SyntenyHG10015621
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572150.1 putative pectinesterase/pectinesterase inhibitor 40, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0950Show/hide
Query:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFF
        + AI+  P+NS  RFYI++ P IY EH +I   K   AL+GD+A TTII+DNR N  GF TSD  T +   N F
Subjt:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFF

XP_022137308.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]1.4e-0951.95Show/hide
Query:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFD-EHSNFFSSLI
        AI+  P+NS  RFYI++    YNEH EI   KT  AL+GDDA+TTII+DNR NR GF T    TF+ +  NF +  I
Subjt:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFD-EHSNFFSSLI

XP_022143502.1 pectinesterase-like [Momordica charantia]5.6e-1154.17Show/hide
Query:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFF
        AIS  P+NS  RFYI IK   YNEH E+  +KT   L+GD+A TT+I+DNR N  GFGTS   TF    N F
Subjt:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFF

XP_022148123.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]3.6e-1045.57Show/hide
Query:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFFSSLIL
        + AI+  PNN   RFYI++KP IY EH E+   KT  +L+GDDA+TT+I+D+R N  GF T+   TF   +  F +  L
Subjt:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFFSSLIL

XP_022150325.1 probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia]4.7e-1056.25Show/hide
Query:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPIT
        AI+  PN S  RFYI++KP  YNEH E+  +KT  AL+GDDA+TTII+DNR N  GF T+   T
Subjt:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPIT

TrEMBL top hitse value%identityAlignment
A0A6J1C9Z6 Pectinesterase6.6e-1051.95Show/hide
Query:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFD-EHSNFFSSLI
        AI+  P+NS  RFYI++    YNEH EI   KT  AL+GDDA+TTII+DNR NR GF T    TF+ +  NF +  I
Subjt:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFD-EHSNFFSSLI

A0A6J1CR03 Pectinesterase2.7e-1154.17Show/hide
Query:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFF
        AIS  P+NS  RFYI IK   YNEH E+  +KT   L+GD+A TT+I+DNR N  GFGTS   TF    N F
Subjt:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFF

A0A6J1D381 Pectinesterase1.7e-1045.57Show/hide
Query:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFFSSLIL
        + AI+  PNN   RFYI++KP IY EH E+   KT  +L+GDDA+TT+I+D+R N  GF T+   TF   +  F +  L
Subjt:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFFSSLIL

A0A6J1D863 Pectinesterase2.3e-1056.25Show/hide
Query:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPIT
        AI+  PN S  RFYI++KP  YNEH E+  +KT  AL+GDDA+TTII+DNR N  GF T+   T
Subjt:  AISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPIT

A0A6J1KPG6 Pectinesterase1.9e-0946.84Show/hide
Query:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEH-SNFFSSLI
        + AI   PN +  RFYI+IKP IYNEH EI  +KT  +L+GD+A+TTII+DNR    GF T++  T   + +NF +  +
Subjt:  AQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEH-SNFFSSLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCTGGGCCGAGCTGGCCTGGTCGGCCTCGATACTGAAGCCGAGGCTGAGCCTATCTGTTTGGGTGCACGAGCCCAAGCAATATCTATGACACCAAATAATAGTTA
TTATAGGTTTTACATCAACATAAAGCCTAGAATATATAACGAACATGATGAAATTGCGGGTGAAAAAACTTGTAGAGCATTGGTAGGAGACGATGCAACAACTACCATTA
TTATTGATAATAGGAGAAATCGTCGTGGTTTTGGAACCTCGGATCCAATCACTTTCGATGAGCACTCTAATTTTTTTTCTTCTTTAATTTTAATTAGTTTTTTAATTAGA
AAAATATTCATCTTCTTTTGGTCCACTGTGTGTAGCAATTGCAATTTGATAGGTGACAAAAAAAAATTTGAAAATTATTTTAGAATGTATGAGGCTACAGAGGAACTTAG
TATTACTGTTTTAATGATTAAAATAATGATTATTATATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCTGGGCCGAGCTGGCCTGGTCGGCCTCGATACTGAAGCCGAGGCTGAGCCTATCTGTTTGGGTGCACGAGCCCAAGCAATATCTATGACACCAAATAATAGTTA
TTATAGGTTTTACATCAACATAAAGCCTAGAATATATAACGAACATGATGAAATTGCGGGTGAAAAAACTTGTAGAGCATTGGTAGGAGACGATGCAACAACTACCATTA
TTATTGATAATAGGAGAAATCGTCGTGGTTTTGGAACCTCGGATCCAATCACTTTCGATGAGCACTCTAATTTTTTTTCTTCTTTAATTTTAATTAGTTTTTTAATTAGA
AAAATATTCATCTTCTTTTGGTCCACTGTGTGTAGCAATTGCAATTTGATAGGTGACAAAAAAAAATTTGAAAATTATTTTAGAATGTATGAGGCTACAGAGGAACTTAG
TATTACTGTTTTAATGATTAAAATAATGATTATTATATGTTGA
Protein sequenceShow/hide protein sequence
MNLGRAGLVGLDTEAEAEPICLGARAQAISMTPNNSYYRFYINIKPRIYNEHDEIAGEKTCRALVGDDATTTIIIDNRRNRRGFGTSDPITFDEHSNFFSSLILISFLIR
KIFIFFWSTVCSNCNLIGDKKKFENYFRMYEATEELSITVLMIKIMIIIC