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HG10015623 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015623
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S acidic ribosomal protein P2-like
Genome locationChr02:28230870..28231996
RNA-Seq ExpressionHG10015623
SyntenyHG10015623
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034662.1 60S acidic ribosomal protein P2-4-like [Cucumis melo var. makuwa]5.7e-4292.24Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAEIDE+RIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAA  GGGGGGAAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDDVSFL   E
Subjt:  EEKEESDDVSFLSLYE

XP_004150488.1 60S acidic ribosomal protein P2-4 [Cucumis sativus]2.0e-3987.07Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGNS+PSAKDLKDILGSVGAE+DE+RI LLLSNVKGKD+TELIASGREKLASVPSGGGAAVAVAA  GGGGGGAAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

XP_008446770.1 PREDICTED: 60S acidic ribosomal protein P2-4-like [Cucumis melo]3.1e-4089.66Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAEIDE+RIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAA  GGGGGGAAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

XP_022957078.1 60S acidic ribosomal protein P2-1-like [Cucurbita moschata]9.1e-4087.07Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+VKGKD+TELIASGREKLASVPSGGGAAVAVAAA  GGGGGAAAPAAAE+KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

XP_038891319.1 60S acidic ribosomal protein P2-2-like [Benincasa hispida]2.0e-3989.66Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDE+RIELLLSNVKGKDVTELIASGREKLASVPSGGGA VA AAA GGGGGGA APAAAE+KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

TrEMBL top hitse value%identityAlignment
A0A0A0KRE0 Uncharacterized protein9.8e-4087.07Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGNS+PSAKDLKDILGSVGAE+DE+RI LLLSNVKGKD+TELIASGREKLASVPSGGGAAVAVAA  GGGGGGAAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

A0A1S3BFW0 60S acidic ribosomal protein P2-4-like1.5e-4089.66Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAEIDE+RIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAA  GGGGGGAAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

A0A5D3CBJ1 60S acidic ribosomal protein P2-4-like2.8e-4292.24Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAEIDE+RIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAA  GGGGGGAAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDDVSFL   E
Subjt:  EEKEESDDVSFLSLYE

A0A6J1GZ75 60S acidic ribosomal protein P2-1-like4.4e-4087.07Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+VKGKD+TELIASGREKLASVPSGGGAAVAVAAA  GGGGGAAAPAAAE+KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like9.8e-4086.21Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DED+IELL+S+VKGKD+TELIASGREKLASVPSGGGAAVAVAA+  GGGGGAAAPAAAE+KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

SwissProt top hitse value%identityAlignment
P41099 60S acidic ribosomal protein P24.0e-3069.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK++AA+LLA+LGGN+SP+ +DLK IL SVGA+ D+D+IELLLS VKGKD+TELIASGRE+LASVPSGGG  VAVAAA GGGGG A A AA E KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        E  EESD+    SL++
Subjt:  EEKEESDDVSFLSLYE

P46252 60S acidic ribosomal protein P2A2.4e-2768.97Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK VAAYLLAVL GN+SPSA DL  IL SVG E+D +++ELLLS + GKD+TELIA+GREK ASVP GGG  VAVAAA    GG  AAP AAE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL++
Subjt:  EEKEESDDVSFLSLYE

P51407 60S acidic ribosomal protein P2-19.5e-3270.69Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+VAA+LLAVL G +SP+  D+KDILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  AP AAE+KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

Q9LXM8 60S acidic ribosomal protein P2-42.6e-2968.1Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+ AA+LLAVLGGN++PSA ++KDI+G+VGA++D + IELLL  V GKD+ ELIASGREKLASVPSGGG  VAV+AA   GGGGAAAPA    KKE K 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

Q9SLF7 60S acidic ribosomal protein P2-28.0e-3169.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  A +AAE+KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family5.7e-3269.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  A +AAE+KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

AT2G27710.2 60S acidic ribosomal protein family5.7e-3269.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  A +AAE+KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

AT2G27710.3 60S acidic ribosomal protein family5.7e-3269.83Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+VAAYLLAVL G +SP++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  A +AAE+KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

AT2G27720.1 60S acidic ribosomal protein family6.7e-3370.69Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+VAA+LLAVL G +SP+  D+KDILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  AP AAE+KKEEK 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE

AT3G44590.2 60S acidic ribosomal protein family1.8e-3068.1Show/hide
Query:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV
        MK+ AA+LLAVLGGN++PSA ++KDI+G+VGA++D + IELLL  V GKD+ ELIASGREKLASVPSGGG  VAV+AA   GGGGAAAPA    KKE K 
Subjt:  MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKV

Query:  EEKEESDDVSFLSLYE
        EEKEESDD    SL+E
Subjt:  EEKEESDDVSFLSLYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCGTTGCTGCTTATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGGATATTCTCGGATCTGTTGGAGCTGAAATTGATGAGGA
CAGAATCGAGCTTCTGCTGTCTAATGTTAAGGGTAAGGACGTTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCTGTGG
CAGTTGCTGCTGCAGGAGGTGGTGGCGGTGGTGGTGCCGCTGCCCCTGCTGCAGCTGAGACGAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGACGATGTAAGC
TTCCTAAGTCTTTATGAAAGTGTTGCTTGGAATTGCATTTTAATAGTCGAAATTTTCACACTCTTCACAACTGGAAGCAGAATTCTGTCGAAAATTGAAAGGCTGAAACA
TCTCACATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATCGTTGCTGCTTATTTGCTCGCCGTTTTGGGAGGCAACTCCAGCCCTTCTGCTAAAGATTTGAAGGATATTCTCGGATCTGTTGGAGCTGAAATTGATGAGGA
CAGAATCGAGCTTCTGCTGTCTAATGTTAAGGGTAAGGACGTTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCTGCTGTGG
CAGTTGCTGCTGCAGGAGGTGGTGGCGGTGGTGGTGCCGCTGCCCCTGCTGCAGCTGAGACGAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAATCAGACGATGTAAGC
TTCCTAAGTCTTTATGAAAGTGTTGCTTGGAATTGCATTTTAATAGTCGAAATTTTCACACTCTTCACAACTGGAAGCAGAATTCTGTCGAAAATTGAAAGGCTGAAACA
TCTCACATCATGA
Protein sequenceShow/hide protein sequence
MKIVAAYLLAVLGGNSSPSAKDLKDILGSVGAEIDEDRIELLLSNVKGKDVTELIASGREKLASVPSGGGAAVAVAAAGGGGGGGAAAPAAAETKKEEKVEEKEESDDVS
FLSLYESVAWNCILIVEIFTLFTTGSRILSKIERLKHLTS