; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015626 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015626
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRAB6-interacting golgin
Genome locationChr02:28253932..28255340
RNA-Seq ExpressionHG10015626
SyntenyHG10015626
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034665.1 uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa]2.2e-4493.64Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKK
        KSLGQICQKK
Subjt:  KSLGQICQKK

XP_004150485.1 uncharacterized protein LOC101217540 [Cucumis sativus]9.1e-4391.82Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN +RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKK
        KSLGQICQKK
Subjt:  KSLGQICQKK

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]2.2e-4493.64Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKK
        KSLGQICQKK
Subjt:  KSLGQICQKK

XP_022968567.1 uncharacterized protein LOC111467754 isoform X2 [Cucurbita maxima]3.0e-3883.78Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GNGER++SEGS G++E+ EM  +LTVSTLQAREEEIER+KMEVKEKVE QL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKK
        LKSLGQICQKK
Subjt:  LKSLGQICQKK

XP_022968568.1 uncharacterized protein LOC111467754 isoform X3 [Cucurbita maxima]4.7e-3978.99Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GNGER++SEGS G++E+ EM  +LTVSTLQAREEEIER+KMEVKEKVE QL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKVFPQRQEF
        LKSLGQICQKK+  Q + +
Subjt:  LKSLGQICQKKVFPQRQEF

TrEMBL top hitse value%identityAlignment
A0A0A0KTG1 RAB6-interacting golgin4.4e-4391.82Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN +RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKK
        KSLGQICQKK
Subjt:  KSLGQICQKK

A0A1S3BFW5 RAB6-interacting golgin1.1e-4493.64Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKK
        KSLGQICQKK
Subjt:  KSLGQICQKK

A0A5D3CFS0 RAB6-interacting golgin1.1e-4493.64Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKK
        KSLGQICQKK
Subjt:  KSLGQICQKK

A0A6J1HV92 RAB6-interacting golgin1.5e-3883.78Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GNGER++SEGS G++E+ EM  +LTVSTLQAREEEIER+KMEVKEKVE QL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKK
        LKSLGQICQKK
Subjt:  LKSLGQICQKK

A0A6J1HYE2 RAB6-interacting golgin2.3e-3978.99Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GNGER++SEGS G++E+ EM  +LTVSTLQAREEEIER+KMEVKEKVE QL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKVFPQRQEF
        LKSLGQICQKK+  Q + +
Subjt:  LKSLGQICQKKVFPQRQEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)7.5e-1948.11Show/hide
Query:  ERVLSEGSIGQN-------EEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLG
        +R+ S G+I  N       +EE +S+   +  +A+E+EIER+KMEVK++V+ +L  AEE  +RLA+I EELE + DPM KE+  +RKR+D + RELK LG
Subjt:  ERVLSEGSIGQN-------EEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLG

Query:  QICQKK
        Q CQ+K
Subjt:  QICQKK

AT3G09980.1 Family of unknown function (DUF662)5.7e-1955.21Show/hide
Query:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
        +S  S    E+E +S+  +S  +A+EEEIE+KKME++E+V+ QL R EEE KRLA I EELE + DPM KEV  VRK+ID+V +ELK LG   QKK
Subjt:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK

AT3G52900.1 Family of unknown function (DUF662)3.6e-2154.87Show/hide
Query:  MTSKNGGGG---NGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVK
        M+SKN  G    +G     +  +  NEEE + K+ V+  QAREEEIERKKM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG VRK+ID   
Subjt:  MTSKNGGGG---NGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVK

Query:  RELKSLGQICQKK
        R++KSL Q CQKK
Subjt:  RELKSLGQICQKK

AT3G52920.1 Family of unknown function (DUF662)2.2e-1854.17Show/hide
Query:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
        LS  S    E+E +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKK
Subjt:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK

AT3G52920.2 Family of unknown function (DUF662)2.2e-1854.17Show/hide
Query:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
        LS  S    E+E +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKK
Subjt:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTAAGAATGGAGGTGGAGGAAATGGCGAGAGAGTCCTATCGGAAGGAAGTATTGGTCAAAACGAAGAAGAGATGGTGTCTAAACTGACCGTATCTACATTGCA
AGCTAGGGAAGAGGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTCGAATTTCAGTTAACCCGTGCGGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAG
AGCTGGAAGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATTTGCCAAAAGAAG
GTGTTTCCTCAACGACAAGAATTCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTAAGAATGGAGGTGGAGGAAATGGCGAGAGAGTCCTATCGGAAGGAAGTATTGGTCAAAACGAAGAAGAGATGGTGTCTAAACTGACCGTATCTACATTGCA
AGCTAGGGAAGAGGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTCGAATTTCAGTTAACCCGTGCGGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAG
AGCTGGAAGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATTTGCCAAAAGAAG
GTGTTTCCTCAACGACAAGAATTCCTTTGA
Protein sequenceShow/hide protein sequence
MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
VFPQRQEFL