; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015688 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015688
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationChr02:28937529..28938161
RNA-Seq ExpressionHG10015688
SyntenyHG10015688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601160.1 hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2864.85Show/hide
Query:  IPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGG
        +PAFCPPLSPFES PPFSFNAL V GAGGGDE TSG GAGGE++V               GG GGLSVV +   GGGGG  VVLDGGGGGG  V LDG G
Subjt:  IPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGG

Query:  GGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGG
        GGG  V L G GGGG  V L G GGGG  V LDG GGGGL V L DGGG G  SV  +GGGGGGG
Subjt:  GGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGG

XP_022957272.1 loricrin-like [Cucurbita moschata]7.2e-3570.25Show/hide
Query:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPL
        MQ+NP NPNKPAP+ITPNA+PAFCPPLSPFES PPFSFNAL V GAGGGDE TSG GAGGE++V   GGGG   VV DGGG GGL VVL+  GGGGGG  
Subjt:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPL

Query:  VVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG
        VVLDG GGGG  V LDG GGGG  V L GGG         GGGGG PSV  +GGGGGG
Subjt:  VVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG

XP_022990509.1 glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]7.8e-2964.33Show/hide
Query:  INPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV
        +NP NPNKPAP+ITP  +PAFCPPLSPFES PPFSFNA  V GAGGGDE TSG GA                     GG GG+SVV +GGGGGGG P  V
Subjt:  INPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV

Query:  LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG
        LDGGGGGG  V LDGGGGGG  V L G GGGG  V L GGGGGG PSV  +GGGGGG
Subjt:  LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]2.3e-3366.67Show/hide
Query:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPL
        MQ+NP NPNKPAPMITPNA+PAFCPPLSPFES PPFSFNAL V GAG GDE TSG GAGGE++V               GG GGLSVV +   GGGGGP 
Subjt:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPL

Query:  VVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG
        VV +GGGGGG  V LD  GGGG  V L G GGGG  V L GGGGGG PSV  +GGGGGG
Subjt:  VVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]1.5e-6176.09Show/hide
Query:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGG----------GEGGLSVVLE
        MQINPTNPNKP PMITPNAIPAFCPPL+PFE PPPFSFNA L  G GGGDEP  GGGAGG++ V LGGGGG ELVVLDGG          G GG SVVL 
Subjt:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGG----------GEGGLSVVLE

Query:  GG----------GGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGG
        GG          GGGGGG  V LDGGGGGG SVALDGGGGGG SVAL GGGGGG SVAL GGGGGG SVALDGGGGGG SVAL DGGG GG SVALDGGG
Subjt:  GG----------GGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGG

Query:  GGGGLSVALDGDGGGGLSVALDGGGGGDAS
        GGG  SVALDG GGGG SVALDGGGGG AS
Subjt:  GGGGLSVALDGDGGGGLSVALDGGGGGDAS

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like9.3e-2869.93Show/hide
Query:  GGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDG
        GGGGGDELVVLDGG  GG+SVVL+GGGGG     VV DGGGGGG SV  DGGGGGG SV   GGGGGG SV   GGGGGG  V LDGGGGGG+SV  D G
Subjt:  GGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDG

Query:  ---------GGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS
                 GG GG+SV LD GGGGGG+SV LDG GGGG+SV LDGGGGGDAS
Subjt:  ---------GGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS

A0A2B7ZNF9 Uncharacterized protein (Fragment)7.9e-1152.91Show/hide
Query:  LVGGAGGGDEPTSG--GGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVAL
        +V GAGGG     G  GG GG +++  GGGGG   VVL  GG GG      GGGGGGGG  V+  GGGGGG    + G GGGG  V   GGGGGG SV L
Subjt:  LVGGAGGGDEPTSG--GGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVAL

Query:  VGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALD----GGGGGGGLSVALDGDGGGGLSVALDGGGGG
          GGGG   +   GGGGGG +  L  GGG GG+SV L     GGGGGGG  V   G GGGG  V   GGGGG
Subjt:  VGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALD----GGGGGGGLSVALDGDGGGGLSVALDGGGGG

A0A6I8T397 Cysteine-rich venom protein, putative2.4e-1252.73Show/hide
Query:  GGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV-LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGG
        GG GG    + GGG GG +    GGGGG  +V   GGG GG+ V  +GGGGGGGG +VV   GGGGGG  V   GGGGGG  V   GGGG G  +   GG
Subjt:  GGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV-LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGG

Query:  GGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGG
        GGGG  V   GGGGGG  V +   GG GG  V+   GGGGGG+ V   G GGGG+ V   GGGGG
Subjt:  GGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGG

A0A6J1GYP3 loricrin-like3.5e-3570.25Show/hide
Query:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPL
        MQ+NP NPNKPAP+ITPNA+PAFCPPLSPFES PPFSFNAL V GAGGGDE TSG GAGGE++V   GGGG   VV DGGG GGL VVL+  GGGGGG  
Subjt:  MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPL

Query:  VVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG
        VVLDG GGGG  V LDG GGGG  V L GGG         GGGGG PSV  +GGGGGG
Subjt:  VVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like3.8e-2964.33Show/hide
Query:  INPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV
        +NP NPNKPAP+ITP  +PAFCPPLSPFES PPFSFNA  V GAGGGDE TSG GA                     GG GG+SVV +GGGGGGG P  V
Subjt:  INPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV

Query:  LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG
        LDGGGGGG  V LDGGGGGG  V L G GGGG  V L GGGGGG PSV  +GGGGGG
Subjt:  LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATCAATCCTACAAATCCCAACAAACCTGCTCCTATGATCACTCCAAACGCAATCCCTGCCTTTTGTCCACCGCTCAGTCCTTTTGAATCTCCACCACCC
TTTTCATTCAATGCTTTATTAGTTGGCGGTGCCGGTGGCGGAGATGAACCCACATCAGGCGGTGGCGCCGGTGGTGAGATAATGGTGCCACTGGGTGGCGGTGGT
GGAGATGAGTTGGTTGTATTGGATGGTGGTGGTGAAGGTGGACTGTCAGTTGTGTTGGAGGGCGGCGGTGGTGGCGGCGGCGGACCATTAGTTGTGTTGGATGGC
GGTGGAGGTGGCGGACCGTCAGTTGCGTTGGATGGCGGCGGAGGTGGTGGACCGTCAGTTGCGTTGGTTGGCGGCGGAGGTGGTGGACCGTCAGTTGCGTTGGTT
GGCGGCGGCGGGGGTGGACCGTCAGTTGCGTTGGATGGTGGCGGCGGTGGTGGACTGTCAGTTGCGTTGGATGATGGCGGCGGCAGTGGTGGACTGTCAGTTGCG
TTGGATGGTGGCGGCGGCGGTGGTGGACTGTCAGTTGCGTTGGATGGCGATGGAGGTGGTGGACTGTCAGTTGCGTTGGATGGCGGTGGAGGAGGAGATGCATCT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATCAATCCTACAAATCCCAACAAACCTGCTCCTATGATCACTCCAAACGCAATCCCTGCCTTTTGTCCACCGCTCAGTCCTTTTGAATCTCCACCACCC
TTTTCATTCAATGCTTTATTAGTTGGCGGTGCCGGTGGCGGAGATGAACCCACATCAGGCGGTGGCGCCGGTGGTGAGATAATGGTGCCACTGGGTGGCGGTGGT
GGAGATGAGTTGGTTGTATTGGATGGTGGTGGTGAAGGTGGACTGTCAGTTGTGTTGGAGGGCGGCGGTGGTGGCGGCGGCGGACCATTAGTTGTGTTGGATGGC
GGTGGAGGTGGCGGACCGTCAGTTGCGTTGGATGGCGGCGGAGGTGGTGGACCGTCAGTTGCGTTGGTTGGCGGCGGAGGTGGTGGACCGTCAGTTGCGTTGGTT
GGCGGCGGCGGGGGTGGACCGTCAGTTGCGTTGGATGGTGGCGGCGGTGGTGGACTGTCAGTTGCGTTGGATGATGGCGGCGGCAGTGGTGGACTGTCAGTTGCG
TTGGATGGTGGCGGCGGCGGTGGTGGACTGTCAGTTGCGTTGGATGGCGATGGAGGTGGTGGACTGTCAGTTGCGTTGGATGGCGGTGGAGGAGGAGATGCATCT
TGA
Protein sequenceShow/hide protein sequence
MQINPTNPNKPAPMITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDG
GGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS