CuGenDBv2

Gene ID	HG10015733
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type E3 ubiquitin transferase
Genome location	Chr02:29451571..29451963
RNA-Seq Expression	HG10015733
Synteny	HG10015733
Gene Ontology terms	GO:0048589 - developmental growth (biological process) GO:0006468 - protein phosphorylation (biological process) GO:0006952 - defense response (biological process) GO:0009788 - negative regulation of abscisic acid-activated signaling pathway (biological process) GO:0016197 - endosomal transport (biological process) GO:0032940 - secretion by cell (biological process) GO:0033184 - positive regulation of histone ubiquitination (biological process) GO:0045324 - late endosome to vacuole transport (biological process) GO:0005769 - early endosome (cellular component) GO:0005802 - trans-Golgi network (cellular component) GO:0043621 - protein self-association (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0004672 - protein kinase activity (molecular function)
InterPro domains	IPR044584 - E3 ubiquitin-protein ligase KEG IPR040847 - Mind bomb, SH3 repeat domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034767.1 E3 ubiquitin-protein ligase KEG [Cucumis melo var. makuwa]

2.0e-36

96.2

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRTIAAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

XP_008446971.1 PREDICTED: E3 ubiquitin-protein ligase KEG [Cucumis melo]

2.0e-36

96.2

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRTIAAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

XP_011655924.1 E3 ubiquitin-protein ligase KEG [Cucumis sativus]

2.0e-36

96.2

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRTIAAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

XP_022956716.1 E3 ubiquitin-protein ligase KEG [Cucurbita moschata]

4.2e-34

91.14

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F IGDWVKFKRTI AP+YGWQGAK+KSVGFVQ+ILD+DNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

XP_038892922.1 E3 ubiquitin-protein ligase KEG [Benincasa hispida]

2.2e-35

93.67

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRT+AAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLK DVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRU3 RING-type E3 ubiquitin transferase

9.7e-37

96.2

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRTIAAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

A0A1S3BFT0 RING-type E3 ubiquitin transferase

9.7e-37

96.2

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRTIAAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

A0A5A7SZL7 RING-type E3 ubiquitin transferase

9.7e-37

96.2

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F+IGDWVKFKRTIAAP+YGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

A0A6J1GXB1 RING-type E3 ubiquitin transferase

2.0e-34

91.14

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F IGDWVKFKRTI AP+YGWQGAK+KSVGFVQ+ILD+DNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

A0A6J1IAA8 RING-type E3 ubiquitin transferase

2.0e-34

91.14

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T F IGDWVKFKRTI AP+YGWQGAK+KSVGFVQ+ILD+DNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

SwissProt top hits

e value

%identity

Alignment

Q9FY48 E3 ubiquitin-protein ligase KEG

4.7e-28

68.35

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T +++GDWVKFKR I  P +GWQGAK KSVGFVQ IL+K++++++FCSGE  VLANEV+K+IPLDRGQHV+L+ DVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

Arabidopsis top hits

e value

%identity

Alignment

AT5G13530.1 protein kinases;ubiquitin-protein ligases

3.3e-29

68.35

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T +++GDWVKFKR I  P +GWQGAK KSVGFVQ IL+K++++++FCSGE  VLANEV+K+IPLDRGQHV+L+ DVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

AT5G13530.2 protein kinases;ubiquitin-protein ligases

3.3e-29

68.35

Show/hide

Query:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP
        T +++GDWVKFKR I  P +GWQGAK KSVGFVQ IL+K++++++FCSGE  VLANEV+K+IPLDRGQHV+L+ DVKEP
Subjt:  TRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTAGATTCAAAATTGGTGACTGGGTAAAATTCAAAAGAACGATTGCAGCTCCTTCTTATGGTTGGCAAGGTGCAAAGCATAAGAGCGTTGGCTTTGTGCAAAACAT
CTTGGACAAGGACAACCTCATGGTCTCATTTTGCTCTGGAGAAGTTCATGTGTTAGCAAACGAAGTTATAAAAGTCATCCCGCTGGATAGAGGACAGCATGTCCAACTTA
AAAATGATGTAAAAGAGCCCAGCCTAGAAGAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MTRFKIGDWVKFKRTIAAPSYGWQGAKHKSVGFVQNILDKDNLMVSFCSGEVHVLANEVIKVIPLDRGQHVQLKNDVKEPSLEE

HG10015733 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome