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HG10015737 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015737
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationChr02:29490409..29490810
RNA-Seq ExpressionHG10015737
SyntenyHG10015737
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441949.1 PREDICTED: uncharacterized protein LOC103485948 [Cucumis melo]3.6e-2459.38Show/hide
Query:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN
        G  Y+QMTTNI +CIN VL DAR+LS+ + LDHIR   + WF +R+ IA  R   LSDH E L+KL D+RS+ Y+VR IDH+ELEIVD H+NP IN
Subjt:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN

XP_022131652.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]5.1e-1844.17Show/hide
Query:  LEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSR
        LE +GK +W               C     RY+QMTTNI E +NA+   AR LS+T+LLDHIRG+ Q WF + RT+AS R   LSD+ EE++  A   +R
Subjt:  LEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSR

Query:  TYIVRSIDHHELEIVDGHLN
         +IV +ID    E++DG+LN
Subjt:  TYIVRSIDHHELEIVDGHLN

XP_022153246.1 uncharacterized protein LOC111020781 [Momordica charantia]2.5e-1745.83Show/hide
Query:  LEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSR
        LE +GK +W               C     RY+QMTTNI E INA+   AR LSVT+LLDHIRG+ Q W  +RRT+AS R   LSD  EE++  A   +R
Subjt:  LEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSR

Query:  TYIVRSIDHHELEIVDGHLN
         +IV +ID    E+ DG+LN
Subjt:  TYIVRSIDHHELEIVDGHLN

XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]1.1e-2050.46Show/hide
Query:  RYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIV
        R  F K       G RY+QMT+NI E +NAVLV ARSL VT+LL+H R + Q WF +RRT  S R   L+D+GE  M+ A+  SRT+ +  IDHHELE++
Subjt:  RYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIV

Query:  DGHLNPRIN
        DG    R+N
Subjt:  DGHLNPRIN

XP_022155392.1 uncharacterized protein LOC111022536 [Momordica charantia]3.5e-1954.17Show/hide
Query:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN
        G RY+QMT+NIVE +NAVLV ARSL VT+LL+H   + Q WF +RRT AS R   L+D+GE  M+ A+  SRT+ +  IDHHELE+ +G    R+N
Subjt:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN

TrEMBL top hitse value%identityAlignment
A0A1S3B576 uncharacterized protein LOC1034859481.8e-2459.38Show/hide
Query:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN
        G  Y+QMTTNI +CIN VL DAR+LS+ + LDHIR   + WF +R+ IA  R   LSDH E L+KL D+RS+ Y+VR IDH+ELEIVD H+NP IN
Subjt:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN

A0A5A7U8L2 MuDR family transposase1.8e-2459.38Show/hide
Query:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN
        G  Y+QMTTNI +CIN VL DAR+LS+ + LDHIR   + WF +R+ IA  R   LSDH E L+KL D+RS+ Y+VR IDH+ELEIVD H+NP IN
Subjt:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN

A0A6J1BRM2 protein FAR1-RELATED SEQUENCE 4-like2.5e-1844.17Show/hide
Query:  LEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSR
        LE +GK +W               C     RY+QMTTNI E +NA+   AR LS+T+LLDHIRG+ Q WF + RT+AS R   LSD+ EE++  A   +R
Subjt:  LEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSR

Query:  TYIVRSIDHHELEIVDGHLN
         +IV +ID    E++DG+LN
Subjt:  TYIVRSIDHHELEIVDGHLN

A0A6J1DK28 uncharacterized protein LOC1110207875.3e-2150.46Show/hide
Query:  RYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIV
        R  F K       G RY+QMT+NI E +NAVLV ARSL VT+LL+H R + Q WF +RRT  S R   L+D+GE  M+ A+  SRT+ +  IDHHELE++
Subjt:  RYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIV

Query:  DGHLNPRIN
        DG    R+N
Subjt:  DGHLNPRIN

A0A6J1DP73 uncharacterized protein LOC1110225361.7e-1954.17Show/hide
Query:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN
        G RY+QMT+NIVE +NAVLV ARSL VT+LL+H   + Q WF +RRT AS R   L+D+GE  M+ A+  SRT+ +  IDHHELE+ +G    R+N
Subjt:  GRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRTYIVRSIDHHELEIVDGHLNPRIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGAGTCTGTCTTCCTATACTATTGGAACAGGTTGGCAAACTACAGTGGTGTCCAACAATACCTTACCGATATCGGTTTGTCAAGGTGGGCCCGTGTATACCAGG
GGGAAGGAGATACAACCAGATGACAACTAATATTGTTGAGTGCATAAATGCAGTATTAGTGGATGCTCGATCCCTTTCAGTCACTTCACTGTTGGATCACATTAGAGGTA
TGCAACAGGAATGGTTTTCTGACCGTAGGACGATAGCATCAAAGCGCACAATATTTTTGTCTGACCATGGGGAAGAACTTATGAAACTTGCAGATGTAAGGTCAAGGACT
TATATCGTTCGATCGATTGATCACCATGAGCTTGAGATTGTTGATGGTCATCTTAACCCGCGTATTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGAGTCTGTCTTCCTATACTATTGGAACAGGTTGGCAAACTACAGTGGTGTCCAACAATACCTTACCGATATCGGTTTGTCAAGGTGGGCCCGTGTATACCAGG
GGGAAGGAGATACAACCAGATGACAACTAATATTGTTGAGTGCATAAATGCAGTATTAGTGGATGCTCGATCCCTTTCAGTCACTTCACTGTTGGATCACATTAGAGGTA
TGCAACAGGAATGGTTTTCTGACCGTAGGACGATAGCATCAAAGCGCACAATATTTTTGTCTGACCATGGGGAAGAACTTATGAAACTTGCAGATGTAAGGTCAAGGACT
TATATCGTTCGATCGATTGATCACCATGAGCTTGAGATTGTTGATGGTCATCTTAACCCGCGTATTAATTGA
Protein sequenceShow/hide protein sequence
MSRVCLPILLEQVGKLQWCPTIPYRYRFVKVGPCIPGGRRYNQMTTNIVECINAVLVDARSLSVTSLLDHIRGMQQEWFSDRRTIASKRTIFLSDHGEELMKLADVRSRT
YIVRSIDHHELEIVDGHLNPRIN