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HG10015745 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015745
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTranscription initiation factor TFIID subunit 1 isoform X1
Genome locationChr02:29624090..29624293
RNA-Seq ExpressionHG10015745
SyntenyHG10015745
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
GO:0017025 - TBP-class protein binding (molecular function)
InterPro domainsIPR036741 - TAFII-230 TBP-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593022.1 Transcription initiation factor TFIID subunit 1, partial [Cucurbita argyrosperma subsp. sororia]7.0e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G R LG MF N+DNSGD+DA+Y DE+ +EHLA +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
TYK11576.1 transcription initiation factor TFIID subunit 1 isoform X1 [Cucumis melo var. makuwa]7.0e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G RFLG MF N+DNSGD+DA+Y DE+ +EHL  +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
XP_011659205.1 transcription initiation factor TFIID subunit 1 [Cucumis sativus]7.0e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G RFLG MF N+DNSGD+DA+Y DE+ +EHL  +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
XP_023004897.1 transcription initiation factor TFIID subunit 1 isoform X1 [Cucurbita maxima]7.0e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G R LG MF N+DNSGD+DA+Y DE+ +EHLA +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
XP_031394779.1 transcription initiation factor TFIID subunit 1 isoform X2 [Punica granatum]7.0e-0863.04Show/hide
Query:  DEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        DE +YE+ GSG RFLG MF N+DNSGD+DA+Y DE  +EHLA +A+
Subjt:  DEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
TrEMBL top hitse value%identityAlignment
A0A1S3C886 transcription initiation factor TFIID subunit 1 isoform X13.4e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G RFLG MF N+DNSGD+DA+Y DE+ +EHL  +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
A0A5A7SLH8 Transcription initiation factor TFIID subunit 1 isoform X13.4e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G RFLG MF N+DNSGD+DA+Y DE+ +EHL  +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
A0A6J1H5J5 transcription initiation factor TFIID subunit 1 isoform X13.4e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G R LG MF N+DNSGD+DA+Y DE+ +EHLA +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
A0A6J1L0S9 transcription initiation factor TFIID subunit 1 isoform X13.4e-0861.7Show/hide
Query:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        +D+ DYEDAG G R LG MF N+DNSGD+DA+Y DE+ +EHLA +A+
Subjt:  KDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
A0A6P8DC38 transcription initiation factor TFIID subunit 1 isoform X13.4e-0863.04Show/hide
Query:  DEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        DE +YE+ GSG RFLG MF N+DNSGD+DA+Y DE  +EHLA +A+
Subjt:  DEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
SwissProt top hitse value%identityAlignment
Q67W65 Transcription initiation factor TFIID subunit 13.3e-0852.17Show/hide
Query:  DEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        D+ DY++ G G  FLG MF N+D+SGD+DA+Y DE+ +EHL  +A+
Subjt:  DEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
Q8LRK9 Transcription initiation factor TFIID subunit 11.1e-0648.98Show/hide
Query:  SAKDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        S+ D+ +YED   G   LG +F N+DNSGD+DA+Y DE+ +EHL+ +A+
Subjt:  SAKDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
Arabidopsis top hitse value%identityAlignment
AT1G32750.1 HAC13 protein (HAC13)7.5e-0848.98Show/hide
Query:  SAKDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN
        S+ D+ +YED   G   LG +F N+DNSGD+DA+Y DE+ +EHL+ +A+
Subjt:  SAKDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGGCTGAGGAAAGTCTACTTTTTGTCTGGTACGATTATTCTTCATGTTTCAGCCAAAGATGAAGTTGACTATGAGGATGCTGGCAGTGGCATTCGATTCTTGGG
GGTTATGTTCAGGAATATGGATAATTCTGGTGATATTGATGCCAATTATTTTGATGAAAATGTGGAGGAACACCTGGCTACAATGGCTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGGCTGAGGAAAGTCTACTTTTTGTCTGGTACGATTATTCTTCATGTTTCAGCCAAAGATGAAGTTGACTATGAGGATGCTGGCAGTGGCATTCGATTCTTGGG
GGTTATGTTCAGGAATATGGATAATTCTGGTGATATTGATGCCAATTATTTTGATGAAAATGTGGAGGAACACCTGGCTACAATGGCTAATTAG
Protein sequenceShow/hide protein sequence
MERLRKVYFLSGTIILHVSAKDEVDYEDAGSGIRFLGVMFRNMDNSGDIDANYFDENVEEHLATMAN