CuGenDBv2

Gene ID	HG10015754
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ATP synthase subunit a, chloroplastic
Genome location	Chr02:29740841..29741221
RNA-Seq Expression	HG10015754
Synteny	HG10015754
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR000568 - ATP synthase, F0 complex, subunit A IPR045082 - ATP synthase, F0 complex, subunit A, bacterial/chloroplast

Homology

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GenBank top hits

e value

%identity

Alignment

AHM88818.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

7.1e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

AHM91116.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

7.1e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

AHM91176.1 ATP synthase CF0 subunit IV [Lagenaria siceraria]

7.1e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

YP_009751726.1 CF0 subunit IV [Herpetospermum pedunculosum]

7.1e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

YP_009752654.1 CF0 subunit IV [Ampelosycios humblotii]

7.1e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

TrEMBL top hits

e value

%identity

Alignment

A0A1S4ETZ3 ATP synthase subunit a, chloroplastic

3.5e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

A0A1X9Q128 ATP synthase subunit a, chloroplastic

3.5e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

A0A218KG29 ATP synthase subunit a, chloroplastic

3.5e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

A0A249RZA4 ATP synthase subunit a, chloroplastic

3.5e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

G3ETX3 ATP synthase subunit a, chloroplastic

3.5e-54

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

SwissProt top hits

e value

%identity

Alignment

Q09G58 ATP synthase subunit a, chloroplastic

1.7e-53

93.46

Show/hide

Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MN+L CSINT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA +AVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

Q09X29 ATP synthase subunit a, chloroplastic

1.1e-54

95.33

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MN+LLCSINT KGLYDISGVEVGQHLYW+IGGFQVHAQVLITSWVVIAILLGS+IIAVRNPQTIPTDGQNFFEYVLEFIRDVS+TQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

Q0G9N1 ATP synthase subunit a, chloroplastic

1.3e-53

94.39

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MN+L CSINT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

Q4FGF5 ATP synthase subunit a, chloroplastic

1.7e-53

93.46

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MN+L CS+NT KGLYDISGVEVGQH YWQIGGFQVHAQVLITSW VIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

Q4VZP5 ATP synthase subunit a, chloroplastic

9.3e-57

100

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Query:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
        MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
Subjt:  MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT

Query:  MFLFIFV
        MFLFIFV
Subjt:  MFLFIFV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00150.1 ATPase, F0 complex, subunit A protein

1.9e-52

88.07

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Query:  MNILLCSINT--QKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFI
        MN+L CSINT  ++GLY+ISGVEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA++A+RNPQTIPTDGQNFFE+VLEFIRDVSKTQIGEEYGPWVPFI
Subjt:  MNILLCSINT--QKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFI

Query:  GTMFLFIFV
        GT+FLFIFV
Subjt:  GTMFLFIFV

Sequences

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CDS sequence

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ATGAATATTCTATTATGTTCTATCAACACACAAAAGGGGTTATACGATATATCTGGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGC
CCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAAT
ATGTCCTTGAATTCATTCGAGACGTGAGCAAAACTCAGATTGGCGAAGAATATGGTCCATGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTCGAATTGGT
CAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAG

mRNA sequence

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Protein sequence

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MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVRIG
QGLFYLGKSYSYLTES

HG10015754 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome