; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015782 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015782
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationChr03:224005..226326
RNA-Seq ExpressionHG10015782
SyntenyHG10015782
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134523.1 cytochrome c6, chloroplastic [Cucumis sativus]8.2e-7089.04Show/hide
Query:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG
        GKRRT VCQIRTQVK+LK L PPLIA+L+ LSPLNKT G L LA+T EIERGGALFNQ+CIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIYRITY G
Subjt:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG

Query:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]8.8e-7290.41Show/hide
Query:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG
        G RRT VCQIRT VK+L+TLAPPLIA+L+ LSPLNKTPG L LA+T EIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIYRITYYG
Subjt:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG

Query:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]8.2e-7089.66Show/hide
Query:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK
        +RRTAVCQ+R QVK+LKTLAPPLIAVLIAL PLNKTPG  ALAQ+AEIERGGALF+ ACIGCHD GGNIIQPGATLFSSDLERNGAD EEEIY+ITYYGK
Subjt:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK

Query:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        GRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]4.1e-6988.97Show/hide
Query:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK
        +RRTAVCQ+R QV +LKTLAPPLIAVLIAL PLNKTPG  ALAQ+AEIERGGALF+ ACIGCHD GGNIIQPGATLFSSDLERNGAD EEEIY+ITYYGK
Subjt:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK

Query:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        GRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]6.1e-7393.1Show/hide
Query:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK
        KRRT VCQIRTQVK+L +LAPPLIAV +ALSPLN+TPG LALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIYRITYYGK
Subjt:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK

Query:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein4.0e-7089.04Show/hide
Query:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG
        GKRRT VCQIRTQVK+LK L PPLIA+L+ LSPLNKT G L LA+T EIERGGALFNQ+CIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIYRITY G
Subjt:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG

Query:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic4.3e-7290.41Show/hide
Query:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG
        G RRT VCQIRT VK+L+TLAPPLIA+L+ LSPLNKTPG L LA+T EIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIYRITYYG
Subjt:  GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYG

Query:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  KGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic5.6e-6484.35Show/hide
Query:  GKRRTAVCQIR-TQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYY
        G+R TAVCQ R  Q+K+ K+ APPLIAVLIALSP+ KTPG   LAQT EIERGGALF+Q+CIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIY ITYY
Subjt:  GKRRTAVCQIR-TQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYY

Query:  GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        GKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVK+QADRGW NP
Subjt:  GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic4.0e-7089.66Show/hide
Query:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK
        +RRTAVCQ+R QVK+LKTLAPPLIAVLIAL PLNKTPG  ALAQ+AEIERGGALF+ ACIGCHD GGNIIQPGATLFSSDLERNGAD EEEIY+ITYYGK
Subjt:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK

Query:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        GRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic7.5e-6988.28Show/hide
Query:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK
        +RRT VC++R QVK LK LAPPLIAVLIAL PLNKTPG  ALAQ+AEIERGGALF+ ACIGCHDGGGNIIQPGATLFSSDLERNGAD EEEIY+ITYYGK
Subjt:  KRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGK

Query:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP
        GRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVK+QADRGWPNP
Subjt:  GRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c61.3e-0936.73Show/hide
Query:  AEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEI-YRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGW
        A+IE G  +F   C  CH GG N+I P  TL    LE NG +    I Y++T  GK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  AEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEI-YRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGW

P07497 Cytochrome c61.2e-1031.5Show/hide
Query:  LKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRGQ
        +K +    IA L+ L        ++A AQ A++  GG +F+  C  CH GG N++ P  TL  +DL++ G    E I      GKG MP FG        
Subjt:  LKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRGQ

Query:  CTFGPRLQEEEIRLLAKFVKLQADRGW
             +L  ++I  +A +V  Q+++GW
Subjt:  CTFGPRLQEEEIRLLAKFVKLQADRGW

P25935 Cytochrome c61.2e-1031.5Show/hide
Query:  LKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRGQ
        +K +    IA L+ L        ++A AQ A++  GG +F+  C  CH GG N++ P  TL  +DL++ G    E I      GKG MP FG        
Subjt:  LKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRGQ

Query:  CTFGPRLQEEEIRLLAKFVKLQADRGW
             +L  ++I  +A +V  Q+++GW
Subjt:  CTFGPRLQEEEIRLLAKFVKLQADRGW

P51200 Cytochrome c67.6e-1034.91Show/hide
Query:  GYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEI-YRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKL
        G+  +A  A+++ G  +F+  C  CH GG N I P  TL    LE N  +G + I Y++T  GK  MP             FG RL +E+I   A +V  
Subjt:  GYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEI-YRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKL

Query:  QADRGW
        Q+++GW
Subjt:  QADRGW

Q93VA3 Cytochrome c6, chloroplastic1.4e-5173.64Show/hide
Query:  VLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRG
        +LK LAPPL AVL+A+SP+   P   +L QT +I+RG  LFN+ACIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY+GKGRMPGFGE C PRG
Subjt:  VLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKLQADRGWP
        QCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRLLAKFVKLQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c9.7e-5373.64Show/hide
Query:  VLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRG
        +LK LAPPL AVL+A+SP+   P   +L QT +I+RG  LFN+ACIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY+GKGRMPGFGE C PRG
Subjt:  VLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKLQADRGWP
        QCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRLLAKFVKLQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTAAACGACGGACTGCAGTTTGTCAAATTCGTACACAAGTTAAGGTTCTCAAGACCCTGGCTCCCCCTCTCATTGCTGTGCTTATAGCATTATCTCCCCTCAACAAAAC
CCCAGGATATCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTGCATTGTTTAATCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCG
GTGCCACACTCTTTTCAAGTGATCTTGAAAGAAATGGAGCTGATGGCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGCGAGAAC
TGTAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGTTACAGGCAGATCGGGGGTGGCCAAACCCATA
G
mRNA sequenceShow/hide mRNA sequence
GGTAAACGACGGACTGCAGTTTGTCAAATTCGTACACAAGTTAAGGTTCTCAAGACCCTGGCTCCCCCTCTCATTGCTGTGCTTATAGCATTATCTCCCCTCAACAAAAC
CCCAGGATATCTTGCGCTTGCCCAAACGGCAGAAATAGAAAGAGGAGGTGCATTGTTTAATCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCG
GTGCCACACTCTTTTCAAGTGATCTTGAAAGAAATGGAGCTGATGGCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGCGAGAAC
TGTAAGCCAAGGGGTCAGTGCACATTTGGTCCCCGTTTGCAGGAGGAAGAAATTAGGCTTTTGGCGAAGTTTGTAAAGTTACAGGCAGATCGGGGGTGGCCAAACCCATA
G
Protein sequenceShow/hide protein sequence
GKRRTAVCQIRTQVKVLKTLAPPLIAVLIALSPLNKTPGYLALAQTAEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADGEEEIYRITYYGKGRMPGFGEN
CKPRGQCTFGPRLQEEEIRLLAKFVKLQADRGWPNP