CuGenDBv2

Gene ID	HG10015810
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	Chr03:464205..466413
RNA-Seq Expression	HG10015810
Synteny	HG10015810
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0071577 - zinc ion transmembrane transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component) GO:0005385 - zinc ion transmembrane transporter activity (molecular function)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052446.1 hypothetical protein E6C27_scaffold120G00430 [Cucumis melo var. makuwa]

2.6e-47

91.23

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Query:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG
        IVDKL++PMA+VI KFFIASLFMWITPITLL+GFNHN IPGSTRLNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG
Subjt:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG

Query:  EADDPSQAHNKKEE
        +AD PS+AHNKKEE
Subjt:  EADDPSQAHNKKEE

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

3.0e-43

92.45

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA+VIMKFFIASLFMWITPITLL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP FLAEAKASINQSTG+AD PSQA
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
         NKKEE
Subjt:  HNKKEE

XP_008439487.1 PREDICTED: uncharacterized protein LOC103484273 [Cucumis melo]

1.3e-43

92.45

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA+VI KFFIASLFMWITPITLL+GFNHN IPGSTRLNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG+AD PS+A
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
        HNKKEE
Subjt:  HNKKEE

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

6.7e-43

91.51

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA VI KFFIASLFMWITPI LLYGFNHNLIPGST+LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+AEAKASINQS G+A+DPSQA
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
        +NKKEE
Subjt:  HNKKEE

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

2.0e-47

92.11

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Query:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG
        IVDKLKIPMASVI KFFIASLFMWITPI LLYGFNHNLIPGST+LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFL EAKASINQS G
Subjt:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG

Query:  EADDPSQAHNKKEE
        + ++PSQAHNKKEE
Subjt:  EADDPSQAHNKKEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

2.8e-47

91.23

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Query:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG
        IVDKL++PMA+VIMKFFIASLFMWITPITLL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDP FLAEAKASINQSTG
Subjt:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG

Query:  EADDPSQAHNKKEE
        +AD PSQA NKKEE
Subjt:  EADDPSQAHNKKEE

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

6.5e-44

92.45

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA+VI KFFIASLFMWITPITLL+GFNHN IPGSTRLNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG+AD PS+A
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
        HNKKEE
Subjt:  HNKKEE

A0A5A7UE48 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.3e-47

91.23

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Query:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG
        IVDKL++PMA+VI KFFIASLFMWITPITLL+GFNHN IPGSTRLNPHSLTLLSGFLAVISVNVVI IYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG
Subjt:  IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTG

Query:  EADDPSQAHNKKEE
        +AD PS+AHNKKEE
Subjt:  EADDPSQAHNKKEE

A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

4.2e-43

93.4

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MASVIMKFF ASLFMWITPI LLYGFNHNLIPGST+LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAFLAEAKASINQS GEADDPSQA
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
         NKKE+
Subjt:  HNKKEE

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

3.2e-43

91.51

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA VI KFFIASLFMWITPI LLYGFNHNLIPGST+LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAF+AEAKASINQS G+A+DPSQA
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
        +NKKEE
Subjt:  HNKKEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

6.3e-31

65.09

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA V+ KF IAS+FMWI P+ +LYGFNHNL+PGST L+PHSL LLSGFLAV+SVN VI  YI MAMKEP+ KH+PD AFLAEAK S+N+ T  A      
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKEE
          KK+E
Subjt:  HNKKEE

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

4.5e-29

60.95

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Query:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA
        MA V+ KF IAS+FMWI PI +LYGFN++L+PGST L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEP+ KH+PD +F+AEAK S+ + T    +   A
Subjt:  MASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQA

Query:  HNKKE
          K+E
Subjt:  HNKKE

Sequences

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CDS sequence

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ATCGTTGACAAATTGAAGATACCAATGGCAAGCGTCATTATGAAGTTCTTCATTGCATCACTGTTTATGTGGATAACTCCCATCACGTTGCTATATGGTTTTAACCATAA
TTTGATTCCGGGTTCTACACGATTGAATCCTCATTCTCTTACACTCTTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATTGCTATTTATATTATAATGGCAA
TGAAAGAACCCTCTAGTAAACATGAACCGGATCCTGCATTTCTTGCCGAGGCAAAAGCTAGTATAAACCAGTCTACTGGGGAAGCCGATGACCCCTCACAAGCTCACAAT
AAGAAGGAAGAATAG

mRNA sequence

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Protein sequence

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IVDKLKIPMASVIMKFFIASLFMWITPITLLYGFNHNLIPGSTRLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPSSKHEPDPAFLAEAKASINQSTGEADDPSQAHN
KKEE

HG10015810 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome