; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015854 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015854
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box domain-containing protein
Genome locationChr03:766949..767254
RNA-Seq ExpressionHG10015854
SyntenyHG10015854
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039747.1 F-box protein [Cucumis melo var. makuwa]1.0e-1043.62Show/hide
Query:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD
        +R H G YL+GVIYWIG  E K+++Y IYA+NVE+E  +    LDL     +SS A ++  N ++YA+  +        +QVW+MQ+KD WIR+
Subjt:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD

KAE8648955.1 hypothetical protein Csa_007901 [Cucumis sativus]3.9e-1043.68Show/hide
Query:  GVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQA-MIQPLNGTIYASILMFG----EVQVWKMQDKDEWIRD
        GVYL+GVIYWIG +K++K  IY+LNVE+E  +S+  L ++  +++S     I   NG +YA+I + G    +VQ+W MQ KD W+++
Subjt:  GVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQA-MIQPLNGTIYASILMFG----EVQVWKMQDKDEWIRD

TYK02998.1 F-box protein [Cucumis melo var. makuwa]6.0e-1147.31Show/hide
Query:  MPFTIRTHGGVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGE---VQVWKMQDKDEWIR
        +PF I  HG  YL+G IYWIG R++ K+ IYAL+VE+E  +    LD+  L   S +  IQ LNG+IY ++ M+     +QVW+MQ KD WIR
Subjt:  MPFTIRTHGGVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGE---VQVWKMQDKDEWIR

XP_004141602.1 F-box protein At3g07870 [Cucumis sativus]3.9e-1043.68Show/hide
Query:  GVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQA-MIQPLNGTIYASILMFG----EVQVWKMQDKDEWIRD
        GVYL+GVIYWIG +K++K  IY+LNVE+E  +S+  L ++  +++S     I   NG +YA+I + G    +VQ+W MQ KD W+++
Subjt:  GVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQA-MIQPLNGTIYASILMFG----EVQVWKMQDKDEWIRD

XP_008460183.1 PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]1.0e-1043.62Show/hide
Query:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD
        +R H G YL+GVIYWIG  E K+++Y IYA+NVE+E  +    LDL     +SS A ++  N ++YA+  +        +QVW+MQ+KD WIR+
Subjt:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD

TrEMBL top hitse value%identityAlignment
A0A0A0KSJ2 F-box domain-containing protein1.9e-1043.68Show/hide
Query:  GVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQA-MIQPLNGTIYASILMFG----EVQVWKMQDKDEWIRD
        GVYL+GVIYWIG +K++K  IY+LNVE+E  +S+  L ++  +++S     I   NG +YA+I + G    +VQ+W MQ KD W+++
Subjt:  GVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQA-MIQPLNGTIYASILMFG----EVQVWKMQDKDEWIRD

A0A0A0LWG1 F-box domain-containing protein3.2e-1042.42Show/hide
Query:  MPFTIRTHGGVYLDGVIYWI----GERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGE-----VQVWKMQDKDEWIR
        +PF I    GVYL+G+IYW+    G+ K+ KY IYAL+VE+E+ +  V L +     S+    I   NGTIYA+  +  E     +QVW+MQ+KD W+R
Subjt:  MPFTIRTHGGVYLDGVIYWI----GERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGE-----VQVWKMQDKDEWIR

A0A1S3CCE7 uncharacterized protein LOC1034990684.9e-1143.62Show/hide
Query:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD
        +R H G YL+GVIYWIG  E K+++Y IYA+NVE+E  +    LDL     +SS A ++  N ++YA+  +        +QVW+MQ+KD WIR+
Subjt:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD

A0A5A7TE00 F-box protein4.9e-1143.62Show/hide
Query:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD
        +R H G YL+GVIYWIG  E K+++Y IYA+NVE+E  +    LDL     +SS A ++  N ++YA+  +        +QVW+MQ+KD WIR+
Subjt:  IRTHGGVYLDGVIYWIG--ERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILM-----FGEVQVWKMQDKDEWIRD

A0A5D3BVH7 F-box protein2.9e-1147.31Show/hide
Query:  MPFTIRTHGGVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGE---VQVWKMQDKDEWIR
        +PF I  HG  YL+G IYWIG R++ K+ IYAL+VE+E  +    LD+  L   S +  IQ LNG+IY ++ M+     +QVW+MQ KD WIR
Subjt:  MPFTIRTHGGVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGE---VQVWKMQDKDEWIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATACTTTTTTCCATATGCCTTTTACCATTCGTACTCACGGTGGTGTTTACTTGGATGGAGTCATCTATTGGATCGGAGAACGAAAAAAGCATAAATATTCCAT
ATATGCTTTGAATGTTGAATCTGAATACTTTCAATCTGTTGTGGACTTGGACTTGGAACTTCTCCATCACTCCTCCAGTCAGGCCATGATTCAGCCATTAAATGGCACCA
TTTATGCAAGTATTTTAATGTTTGGAGAGGTTCAAGTGTGGAAGATGCAAGACAAAGATGAATGGATTAGAGATTGTTATTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATACTTTTTTCCATATGCCTTTTACCATTCGTACTCACGGTGGTGTTTACTTGGATGGAGTCATCTATTGGATCGGAGAACGAAAAAAGCATAAATATTCCAT
ATATGCTTTGAATGTTGAATCTGAATACTTTCAATCTGTTGTGGACTTGGACTTGGAACTTCTCCATCACTCCTCCAGTCAGGCCATGATTCAGCCATTAAATGGCACCA
TTTATGCAAGTATTTTAATGTTTGGAGAGGTTCAAGTGTGGAAGATGCAAGACAAAGATGAATGGATTAGAGATTGTTATTCATGA
Protein sequenceShow/hide protein sequence
MEDTFFHMPFTIRTHGGVYLDGVIYWIGERKKHKYSIYALNVESEYFQSVVDLDLELLHHSSSQAMIQPLNGTIYASILMFGEVQVWKMQDKDEWIRDCYS