; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015857 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015857
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:793538..793948
RNA-Seq ExpressionHG10015857
SyntenyHG10015857
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594423.1 hypothetical protein SDJN03_10976, partial [Cucurbita argyrosperma subsp. sororia]6.5e-5385.38Show/hide
Query:  VAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAACGVTGV
        +AA+  +L  IVAIAAALEIRPSEHGLEFQS P AGDKSSPEMRSFFGG SSPTPEVALPLPK MNSSE+PGWWTHRDGGDKRL+ ALLVATAACG+TGV
Subjt:  VAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAACGVTGV

Query:  TLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        TLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  TLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

XP_022925668.1 uncharacterized protein LOC111433017 [Cucurbita moschata]2.2e-5683.09Show/hide
Query:  MMIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATA
        M+IPIK VAA+V FLPLIVA+A+ALEIRPSEHGLEFQSPPPAG+KSSPEMRSFF G SSP P+  LPLPK MNSSE+PGWWTHRDGG+KR++ ALLVATA
Subjt:  MMIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATA

Query:  ACGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        ACG+TGVTLLVGSTLFYIYKVKNQ  LPLS+NNNHK
Subjt:  ACGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

XP_022926736.1 uncharacterized protein LOC111433768 [Cucurbita moschata]4.1e-5585.29Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA
        MI IKS+AA+  +L  IVAIAAALEIRPSEHGLEFQS P AGDKSSPEMRSFFGG SSPTPEVALPLPK MNSSE+PGWWTHRDGGDKRL+ ALLVATAA
Subjt:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

XP_023003567.1 uncharacterized protein LOC111497130 [Cucurbita maxima]1.8e-5585.07Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA
        MI IKS+AA+  +L  IVAI AALEIRPSEHGLEFQSPP AGDKSSPEMRSFFGG SSPTPEVALPLPK MNSSE+PGWWTHRDGGDKRL+ ALLVATAA
Subjt:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NNN+
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH

XP_023518243.1 uncharacterized protein LOC111781779 [Cucurbita pepo subsp. pepo]2.8e-5686.03Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA
        MI IKS+AA+  +L  IVAIAAALEIRPSEHGLEFQSPP AGDKSSPEMRSFFGG SSPTPEVALPLPK MNSSE+PGWWTHRDGGDKRL+ ALLVATAA
Subjt:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

TrEMBL top hitse value%identityAlignment
A0A0A0KM65 Uncharacterized protein1.0e-5683.7Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA
        MIPIKS AAIVAF  LI +IAA  EIRPSEHGLEFQSPPP GDKSSPEMRSFFGGI+SPTPEVALP+PKT+NSSESPGWW H DGG+KRL+ ALLVATAA
Subjt:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        CG+TGVTLLVGSTLFYI+K KN+RS+PLS NNNHK
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

A0A6J1CZN3 uncharacterized protein LOC1110157295.4e-5380.58Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAA----ALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLV
        MIPIK  AA+   LPLIVA+ A    ALEIRPSEHGLEFQSPPPAGDKSSPEM SFFGG SSPTP+ ALPLPK MNSSE+PGWWT RDGGD RL+ ALLV
Subjt:  MIPIKSVAAIVAFLPLIVAIAA----ALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLV

Query:  ATAACGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        ATAA G+TGVTLLVGS LFY+YKVKNQRSLPLS+NNNHK
Subjt:  ATAACGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

A0A6J1EFQ9 uncharacterized protein LOC1114337682.0e-5585.29Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA
        MI IKS+AA+  +L  IVAIAAALEIRPSEHGLEFQS P AGDKSSPEMRSFFGG SSPTPEVALPLPK MNSSE+PGWWTHRDGGDKRL+ ALLVATAA
Subjt:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NN NHK
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNN-NHK

A0A6J1EFW4 uncharacterized protein LOC1114330171.0e-5683.09Show/hide
Query:  MMIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATA
        M+IPIK VAA+V FLPLIVA+A+ALEIRPSEHGLEFQSPPPAG+KSSPEMRSFF G SSP P+  LPLPK MNSSE+PGWWTHRDGG+KR++ ALLVATA
Subjt:  MMIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATA

Query:  ACGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        ACG+TGVTLLVGSTLFYIYKVKNQ  LPLS+NNNHK
Subjt:  ACGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK

A0A6J1KMY3 uncharacterized protein LOC1114971308.9e-5685.07Show/hide
Query:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA
        MI IKS+AA+  +L  IVAI AALEIRPSEHGLEFQSPP AGDKSSPEMRSFFGG SSPTPEVALPLPK MNSSE+PGWWTHRDGGDKRL+ ALLVATAA
Subjt:  MIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH
        CG+TGVTLLVGSTL+YI+KVKNQRSLPLS+NNN+
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30515.1 unknown protein2.2e-0632.09Show/hide
Query:  IVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFG--------GISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKR-LKKALLVATAA
        I+  + L   I  A E+RPS+HGLE+   P      S EM SFFG         ISSP+  +   LP  +   +SP     +D  D R +   L+V +  
Subjt:  IVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFG--------GISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKR-LKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH
        CG++GV L+V S L Y       ++  ++ ++ H
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNH

AT4G21740.1 unknown protein2.7e-1237.04Show/hide
Query:  VAFLPLIVAIAAALEIRPSEHGLEFQ-SPPPAGDKSSP-EMRSFFGG--ISSPTPEVALPLPK--TMNSSESPGWWTHRDGG----DKRLKKALLVATAA
        + FL +    + A E+RPS+HGL++Q S PP    S P +M+SFFG    SSP P     LPK    +  +   WW  RDG     D  ++   L A+  
Subjt:  VAFLPLIVAIAAALEIRPSEHGLEFQ-SPPPAGDKSSP-EMRSFFGG--ISSPTPEVALPLPK--TMNSSESPGWWTHRDGG----DKRLKKALLVATAA

Query:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK
        CGV+GV LLV  TL Y ++ +        T N+ K
Subjt:  CGVTGVTLLVGSTLFYIYKVKNQRSLPLSTNNNHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTCCGATCAAATCAGTAGCGGCGATCGTCGCGTTCTTGCCATTGATCGTGGCGATCGCGGCAGCGCTGGAGATACGGCCGTCGGAGCATGGTTTGGAGTTTCA
GAGCCCTCCACCGGCGGGAGACAAATCGTCGCCGGAGATGCGATCTTTTTTCGGAGGAATATCGTCGCCGACACCGGAAGTGGCATTGCCGTTGCCGAAGACGATGAATT
CGAGCGAGTCGCCAGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTAAAAAAGGCATTATTGGTGGCGACGGCGGCTTGTGGAGTTACAGGTGTCACTTTACTA
GTGGGTTCTACGTTATTCTACATTTATAAGGTCAAAAATCAAAGATCATTGCCGTTATCTACAAATAATAATCACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTCCGATCAAATCAGTAGCGGCGATCGTCGCGTTCTTGCCATTGATCGTGGCGATCGCGGCAGCGCTGGAGATACGGCCGTCGGAGCATGGTTTGGAGTTTCA
GAGCCCTCCACCGGCGGGAGACAAATCGTCGCCGGAGATGCGATCTTTTTTCGGAGGAATATCGTCGCCGACACCGGAAGTGGCATTGCCGTTGCCGAAGACGATGAATT
CGAGCGAGTCGCCAGGATGGTGGACCCACCGTGACGGTGGAGATAAACGACTAAAAAAGGCATTATTGGTGGCGACGGCGGCTTGTGGAGTTACAGGTGTCACTTTACTA
GTGGGTTCTACGTTATTCTACATTTATAAGGTCAAAAATCAAAGATCATTGCCGTTATCTACAAATAATAATCACAAATAA
Protein sequenceShow/hide protein sequence
MMIPIKSVAAIVAFLPLIVAIAAALEIRPSEHGLEFQSPPPAGDKSSPEMRSFFGGISSPTPEVALPLPKTMNSSESPGWWTHRDGGDKRLKKALLVATAACGVTGVTLL
VGSTLFYIYKVKNQRSLPLSTNNNHK