; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015879 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015879
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box domain-containing protein
Genome locationChr03:1065098..1067119
RNA-Seq ExpressionHG10015879
SyntenyHG10015879
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-8963.95Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E RNWLELPADV  MIL KLG ++IL +AQ+VCSSWRK+CEDPLMWRV+DMR  GD   M+Y+L   CR AV+ SCGQLI INIEHFGTD LL YI + 
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG
        SNQL++L +  C+ IS++GL +AVSKLP LE LEI    F VE +  +G+C PLLK+LKLN++F   R +  DK ALAIA+ MP LRHL IFG+ +T  G
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG

Query:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+AILDGCPDLESLDLR CFNL LAGQ+G  C+EKIK L LPHDP DDYEF T+I+++
Subjt:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

XP_004134904.1 putative F-box/LRR-repeat protein 9 [Cucumis sativus]4.6e-9568.9Show/hide
Query:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL
        NWLELP++VM MILQK+G IEI  + Q VCSSWRKLC DPLMWR IDMR  G+    NY LR ACRY V+LS G LIDI+IE F TD LL YIARRSN+L
Subjt:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL

Query:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI
        KRL IA C  IS+ GL +A SKLP LEQLEIF   F    +  VGRCCPLLK+LKLNQ+F  G+GM  D+EALAIA+TMPKLRHL IFG+ +T+ GLQAI
Subjt:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI

Query:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+GCPDLESLDLR CFNL   G++G MCAE IKILHLPHD  DDYEF TDIID+
Subjt:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

XP_008439579.1 PREDICTED: putative F-box/LRR-repeat protein 9 [Cucumis melo]2.8e-9267.46Show/hide
Query:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL
        NWLELP++VM MILQK+G IEI  + + VCSSWR L EDPL+WR IDMR  G+L   NY+LR ACRYAV+LS G LIDI+IE FGTD LL YIARRS++L
Subjt:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL

Query:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI
        KRL IA C  IS+ GL +AVSKLP LEQLEIF   F  + +  VG CCPLLK+LKLNQ+F  G+GMV D+EA+AIA+TMPKLRHL I G+ +++ GLQAI
Subjt:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI

Query:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDII
        LDGC DLESLDLR CFNL   GQ+GK+C EKIK LH+PHD  DDYEF TDII
Subjt:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDII

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]9.9e-9063.95Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E RNWLELPADV  MIL KLG ++IL +AQ+VCSSWRK+CEDPLMWRV+DMR  GD   M+Y+L   CR AV+ SCGQLI INIEHFGTD LL+YI + 
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG
        SNQL++L +  C+ IS++GL +AVSKLP LE LEI    F VE +  +G+C PLLK+LKLN++F   R +  DK ALAIA+ MP LRHL IFG+ +T  G
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG

Query:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+AILDGCPDLESLDLR CFNL LAGQ+G  C+EKIK L LPHDP DDYEF T+I+++
Subjt:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]1.6e-9268.31Show/hide
Query:  EGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRS
        E RNWL+LPA+VM MIL KLG IEIL SAQNVCSSWRK+C+DPLMWRVIDMR  G+L+ M+++L I CR+AV+ SCGQLIDINIE+FGTD+LL YI + S
Subjt:  EGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRS

Query:  NQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGL
        NQL+RL +A C++IS++GLT A+S+LP LE LEIF Y F VE ++ VGRCCPLLK LKL +       MV++KEALAIA+TMPKLRHL I G+ +T  GL
Subjt:  NQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGL

Query:  QAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHD
        QAILDGCPDLESLDLR CF+L L GQ+GK CAE+ K+LHLPHD
Subjt:  QAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHD

TrEMBL top hitse value%identityAlignment
A0A0A0KM43 F-box domain-containing protein2.2e-9568.9Show/hide
Query:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL
        NWLELP++VM MILQK+G IEI  + Q VCSSWRKLC DPLMWR IDMR  G+    NY LR ACRY V+LS G LIDI+IE F TD LL YIARRSN+L
Subjt:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL

Query:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI
        KRL IA C  IS+ GL +A SKLP LEQLEIF   F    +  VGRCCPLLK+LKLNQ+F  G+GM  D+EALAIA+TMPKLRHL IFG+ +T+ GLQAI
Subjt:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI

Query:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+GCPDLESLDLR CFNL   G++G MCAE IKILHLPHD  DDYEF TDIID+
Subjt:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

A0A1S3AZR6 putative F-box/LRR-repeat protein 91.3e-9267.46Show/hide
Query:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL
        NWLELP++VM MILQK+G IEI  + + VCSSWR L EDPL+WR IDMR  G+L   NY+LR ACRYAV+LS G LIDI+IE FGTD LL YIARRS++L
Subjt:  NWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQL

Query:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI
        KRL IA C  IS+ GL +AVSKLP LEQLEIF   F  + +  VG CCPLLK+LKLNQ+F  G+GMV D+EA+AIA+TMPKLRHL I G+ +++ GLQAI
Subjt:  KRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAI

Query:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDII
        LDGC DLESLDLR CFNL   GQ+GK+C EKIK LH+PHD  DDYEF TDII
Subjt:  LDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDII

A0A6J1ECV6 F-box protein SKIP19-like isoform X15.3e-8963.57Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E RNWLELPADV  MIL KLG ++IL +AQ+VCSSWRK+CEDPLMWRV+DMR  GD   M+Y+L   CR AV+ SCGQLI I IEHFGTD LL YI + 
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG
        SNQL+ L +  C+ IS++GL +AVSKLP LE LEI    F VE +  +G+C PLLK+LKLN++F   R +  DK ALAIA+ MP LRHL IFG+ +T  G
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG

Query:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+AILDGCPDLESLDLR CFNL LAGQ+G  C+EKIK L LPHDP DDYEF T+I+++
Subjt:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

A0A6J1EGI8 F-box protein SKIP19-like isoform X25.3e-8963.57Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E RNWLELPADV  MIL KLG ++IL +AQ+VCSSWRK+CEDPLMWRV+DMR  GD   M+Y+L   CR AV+ SCGQLI I IEHFGTD LL YI + 
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG
        SNQL+ L +  C+ IS++GL +AVSKLP LE LEI    F VE +  +G+C PLLK+LKLN++F   R +  DK ALAIA+ MP LRHL IFG+ +T  G
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG

Query:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+AILDGCPDLESLDLR CFNL LAGQ+G  C+EKIK L LPHDP DDYEF T+I+++
Subjt:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

A0A6J1ILH5 F-box protein SKIP19-like2.4e-8963.57Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E RNWLELPADV  MIL KLG ++IL +AQ+VCSSWRK+CEDPLMWRV+DMR  GD   M+Y+L   CR AV+ SCGQLI INIEHFGTD LL YI + 
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG
        SNQL++L +  C+ IS++G  +AVSKLP LE LEI    F VE +  +G C PLLK+LKLN++F   R +  DK ALAIA+ MP LRHL IFG+ +T  G
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENG

Query:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF
        L+AILDGCPDLESLDLR CFNL LAGQ+G  C+EKIK L LPHDP DDYEF T+I+++
Subjt:  LQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDF

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 224.3e-5644.75Show/hide
Query:  MNRSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIE--HFGTDKLL
        M   ++  NW ELP D++  IL +L  +EIL +A+ VC SWR++ +DPL+WR IDMR L  L+ + Y +   CR+ V+LS G L++ NI+   F T  LL
Subjt:  MNRSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIE--HFGTDKLL

Query:  NYIARRSNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGS
        NY+A RS+ L+RL +    +I+  G+  A+ KLP LE+LE+       E  + +G+ CP LKTLKL   + +     SD +ALAIA TMP L HL +  +
Subjt:  NYIARRSNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGS

Query:  VITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF
         +T  GL AILDGCP LE LDLR CFN+ L G + + C E+IK    P+D +DDY +
Subjt:  VITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF

Q9M0U7 Putative F-box protein At4g054752.3e-5743.23Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E  NW++LP ++   IL +L V +IL +A+ +C +WR++C+DP MWR I++R   D     ++    CR+ V+LS G L++INIEHF +D LL+YI  R
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVS----------DKEALAIAQTMPKLRHLH
        S  LK LGI+I   ++ KG+   + KLP LE L IF     ++ ++ +G  CP LKTLKLN         +S          D +ALAIA++MPKLRHL 
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVS----------DKEALAIAQTMPKLRHLH

Query:  IFGSVITENGLQAILDGCPDLES-LDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDI
        + G+ +T  GL AILDGCP LE  LD+R CFN+ L G + K C ++IK L  PHD   DY +   +
Subjt:  IFGSVITENGLQAILDGCPDLES-LDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDI

Q9M0U8 Putative F-box/LRR-repeat protein 215.0e-5240.82Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINI-EHFGTDKLLNYIAR
        +E RNW++LP ++   IL +L + +IL +AQ VC  WR++C+DP MWR I+ R   D    N++    CR+ V+LS G L++IN+ EHF +D LL+YI  
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINI-EHFGTDKLLNYIAR

Query:  RSNQLKRLGIAICH-EISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFR--------------NGRGMVSDKEALAIAQTMP
        R+  L+ LG+ +C   +++ G+  A++K+P LE LE+      ++ ++ +G  CP LKTLKLN   R              +   +  D +ALAIA++MP
Subjt:  RSNQLKRLGIAICH-EISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFR--------------NGRGMVSDKEALAIAQTMP

Query:  KLRHLHIFGSVITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF
        KL HL +  + +T  GL AILDGCP LE LD+R CF ++L G + K C E IK L  P D   DY +
Subjt:  KLRHLHIFGSVITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF

Q9M0U9 F-box protein SKIP193.4e-6951.15Show/hide
Query:  EGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRS
        E  NW ELP ++   IL +LG IEIL +AQ VC SWR++C+DP MWR IDM  LGDL  M+YNL I CR+AV+ S G L+DI I +FGT  LLNYIA RS
Subjt:  EGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRS

Query:  NQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGL
        + L+ L +  C +I++ G   AV KLP LE+LE+    FSVE++R VG+CC  +KTLKLN+  +      +D +ALAIA+TMPKLRHL + G+ +++ GL
Subjt:  NQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGL

Query:  QAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKT----DIIDFS
         AILD C +LE LDLR CFN+ L G + K C E +K++  P+D I D +  +    D  DFS
Subjt:  QAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKT----DIIDFS

Q9S9V9 Putative F-box/LRR-repeat protein 236.7e-6549.41Show/hide
Query:  RNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQ
        RNW ELP+ +   IL +LG IEIL +AQ VC  W ++C+DP MWR ID+    D  A  Y+L   CR+AV+ S G LI+I I ++GT+ L+ YIA RS+ 
Subjt:  RNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQ

Query:  LKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQ----RFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITEN
        LK LG+  C  I+++G+ +AVSK+P LE LE+    FS E++R +GR CP LKTLKLN+     F N      D  A AIA++MP+LRHL + G+ +T  
Subjt:  LKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQ----RFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITEN

Query:  GLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTD
        GL AILDGCP LE LDLR CFN+ L G + K C E+IK L  P+D  DD +  +D
Subjt:  GLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTD

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein2.4e-7051.15Show/hide
Query:  EGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRS
        E  NW ELP ++   IL +LG IEIL +AQ VC SWR++C+DP MWR IDM  LGDL  M+YNL I CR+AV+ S G L+DI I +FGT  LLNYIA RS
Subjt:  EGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRS

Query:  NQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGL
        + L+ L +  C +I++ G   AV KLP LE+LE+    FSVE++R VG+CC  +KTLKLN+  +      +D +ALAIA+TMPKLRHL + G+ +++ GL
Subjt:  NQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGL

Query:  QAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKT----DIIDFS
         AILD C +LE LDLR CFN+ L G + K C E +K++  P+D I D +  +    D  DFS
Subjt:  QAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKT----DIIDFS

AT4G05470.1 RNI-like superfamily protein3.5e-5340.82Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINI-EHFGTDKLLNYIAR
        +E RNW++LP ++   IL +L + +IL +AQ VC  WR++C+DP MWR I+ R   D    N++    CR+ V+LS G L++IN+ EHF +D LL+YI  
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINI-EHFGTDKLLNYIAR

Query:  RSNQLKRLGIAICH-EISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFR--------------NGRGMVSDKEALAIAQTMP
        R+  L+ LG+ +C   +++ G+  A++K+P LE LE+      ++ ++ +G  CP LKTLKLN   R              +   +  D +ALAIA++MP
Subjt:  RSNQLKRLGIAICH-EISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFR--------------NGRGMVSDKEALAIAQTMP

Query:  KLRHLHIFGSVITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF
        KL HL +  + +T  GL AILDGCP LE LD+R CF ++L G + K C E IK L  P D   DY +
Subjt:  KLRHLHIFGSVITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF

AT4G05475.1 RNI-like superfamily protein1.6e-5843.23Show/hide
Query:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR
        +E  NW++LP ++   IL +L V +IL +A+ +C +WR++C+DP MWR I++R   D     ++    CR+ V+LS G L++INIEHF +D LL+YI  R
Subjt:  QEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARR

Query:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVS----------DKEALAIAQTMPKLRHLH
        S  LK LGI+I   ++ KG+   + KLP LE L IF     ++ ++ +G  CP LKTLKLN         +S          D +ALAIA++MPKLRHL 
Subjt:  SNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVS----------DKEALAIAQTMPKLRHLH

Query:  IFGSVITENGLQAILDGCPDLES-LDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDI
        + G+ +T  GL AILDGCP LE  LD+R CFN+ L G + K C ++IK L  PHD   DY +   +
Subjt:  IFGSVITENGLQAILDGCPDLES-LDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDI

AT4G05490.1 RNI-like superfamily protein3.1e-5744.75Show/hide
Query:  MNRSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIE--HFGTDKLL
        M   ++  NW ELP D++  IL +L  +EIL +A+ VC SWR++ +DPL+WR IDMR L  L+ + Y +   CR+ V+LS G L++ NI+   F T  LL
Subjt:  MNRSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIE--HFGTDKLL

Query:  NYIARRSNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGS
        NY+A RS+ L+RL +    +I+  G+  A+ KLP LE+LE+       E  + +G+ CP LKTLKL   + +     SD +ALAIA TMP L HL +  +
Subjt:  NYIARRSNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGS

Query:  VITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF
         +T  GL AILDGCP LE LDLR CFN+ L G + + C E+IK    P+D +DDY +
Subjt:  VITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEF

AT4G05497.1 RNI-like superfamily protein1.0e-5245.57Show/hide
Query:  RSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMR---KLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLN
        ++ E RNW ELP ++   IL +LG IEIL +AQ VC SWR++C+DP MWR ID+R    L +   + Y +   C  AV+LS G L++INI++      LN
Subjt:  RSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMR---KLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLN

Query:  YIARRSNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSV--EAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFG
        YIA RS+ L+RLG+  C  +  +G+  A  KLP LE+L+I  Y  S+  + ++ VG+ CP L+TLKLN     G     DK ALAIA+TMP LRHL +F 
Subjt:  YIARRSNQLKRLGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSV--EAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFG

Query:  SVITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGK
        + ++E GL AIL+GCP L++L L  C N+ + G + K
Subjt:  SVITENGLQAILDGCPDLESLDLRLCFNLTLAGQVGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGATCTCAAGAAGGACGGAACTGGCTTGAACTGCCGGCAGACGTAATGCGTATGATTCTGCAGAAGCTAGGCGTCATTGAAATCCTCCACAGCGCTCAAAATGT
GTGCTCTTCGTGGCGTAAGCTCTGCGAGGATCCTCTCATGTGGCGTGTCATCGATATGCGCAAGTTGGGTGATTTGCATGCTATGAATTACAATTTGAGAATTGCCTGCA
GGTACGCTGTTGAACTTAGTTGTGGCCAATTGATCGACATCAACATTGAACACTTTGGCACCGATAAATTGCTCAATTACATCGCTCGGAGATCAAATCAACTGAAAAGA
CTCGGGATTGCTATTTGCCATGAGATCTCAGAGAAGGGATTGACTAGAGCAGTTTCGAAACTTCCATCATTGGAGCAACTTGAAATATTTCCTTATTATTTTTCTGTGGA
AGCTATAAGAAGAGTTGGAAGGTGTTGCCCTCTTTTGAAAACGCTGAAATTGAACCAACGGTTTCGCAATGGAAGAGGGATGGTCTCTGACAAGGAGGCCCTTGCTATTG
CTCAAACTATGCCTAAATTACGCCACCTTCATATATTTGGCAGTGTCATAACTGAGAATGGCTTGCAAGCCATTCTTGATGGTTGTCCTGATCTTGAATCTCTCGACTTG
CGTCTGTGTTTTAATTTAACTTTGGCAGGACAGGTGGGGAAAATGTGTGCTGAAAAGATCAAAATCTTGCATCTGCCTCATGATCCCATTGATGATTATGAATTTAAAAC
CGACATTATTGATTTTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCGATCTCAAGAAGGACGGAACTGGCTTGAACTGCCGGCAGACGTAATGCGTATGATTCTGCAGAAGCTAGGCGTCATTGAAATCCTCCACAGCGCTCAAAATGT
GTGCTCTTCGTGGCGTAAGCTCTGCGAGGATCCTCTCATGTGGCGTGTCATCGATATGCGCAAGTTGGGTGATTTGCATGCTATGAATTACAATTTGAGAATTGCCTGCA
GGTACGCTGTTGAACTTAGTTGTGGCCAATTGATCGACATCAACATTGAACACTTTGGCACCGATAAATTGCTCAATTACATCGCTCGGAGATCAAATCAACTGAAAAGA
CTCGGGATTGCTATTTGCCATGAGATCTCAGAGAAGGGATTGACTAGAGCAGTTTCGAAACTTCCATCATTGGAGCAACTTGAAATATTTCCTTATTATTTTTCTGTGGA
AGCTATAAGAAGAGTTGGAAGGTGTTGCCCTCTTTTGAAAACGCTGAAATTGAACCAACGGTTTCGCAATGGAAGAGGGATGGTCTCTGACAAGGAGGCCCTTGCTATTG
CTCAAACTATGCCTAAATTACGCCACCTTCATATATTTGGCAGTGTCATAACTGAGAATGGCTTGCAAGCCATTCTTGATGGTTGTCCTGATCTTGAATCTCTCGACTTG
CGTCTGTGTTTTAATTTAACTTTGGCAGGACAGGTGGGGAAAATGTGTGCTGAAAAGATCAAAATCTTGCATCTGCCTCATGATCCCATTGATGATTATGAATTTAAAAC
CGACATTATTGATTTTTCATAG
Protein sequenceShow/hide protein sequence
MNRSQEGRNWLELPADVMRMILQKLGVIEILHSAQNVCSSWRKLCEDPLMWRVIDMRKLGDLHAMNYNLRIACRYAVELSCGQLIDINIEHFGTDKLLNYIARRSNQLKR
LGIAICHEISEKGLTRAVSKLPSLEQLEIFPYYFSVEAIRRVGRCCPLLKTLKLNQRFRNGRGMVSDKEALAIAQTMPKLRHLHIFGSVITENGLQAILDGCPDLESLDL
RLCFNLTLAGQVGKMCAEKIKILHLPHDPIDDYEFKTDIIDFS