; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015880 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015880
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box protein SKIP19-like
Genome locationChr03:1068952..1070756
RNA-Seq ExpressionHG10015880
SyntenyHG10015880
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]2.3e-8965.3Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN    P +  EA NWLELP+++  M L+KL AI+ILSSAQ+VCS WRKICKDPLMWRV+DMHN+G+ +    +DY+LE MC  AVDRSCG+L+DINI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        + FG +ELL +I  SSNQLRRLRI+ C+ I+D G +EAVSKLPLLEHLEI LCSF  +TL+TVGRCC LLKSLKL+    RR  +D D +A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI
        L +LQI+G+ LTD GLQAILDGCP+LESLDLR CFNL L  G+L   CA RIK L LPHDP D  EFI
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI

XP_022146724.1 putative F-box/LRR-repeat protein 23 [Momordica charantia]1.3e-8764.26Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN    P +E  A NWLELP++   M L+KL A+DILS+AQ VCS WRKIC DPLMWRV+DM NL D    + +D +LE MC  AVDRSCGQLVDINI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLC--SFDVETLKTVGRCCPLLKSLKL-NKPFYRRLWMDRDDEAFAIAET
        E FG DELLH+IA SSNQLRRLR++ C+DIS +G  EAV KLPLLE LEIF    SFD+ETLKTVGRCCPLL SLKL N+       M  D+EA AIAE 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLC--SFDVETLKTVGRCCPLLKSLKL-NKPFYRRLWMDRDDEAFAIAET

Query:  MPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFIYHNYQI
        MP L HL I+ N LTD+GLQAILDGCP LESLDLR C NL L  G+LE++C+ RIK L LP+DPID C+ +Y N  I
Subjt:  MPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFIYHNYQI

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]4.1e-8664.04Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN       E EA NWLELP++V  M L+KL  +DIL++AQ VCSSWRKIC+DPLMWRV+DM   GD      +DY+LE MCR AVDRSCGQL+ INI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        E+FG D+LLH+I  SSNQLR+LR++ C  ISDEG  +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+ FYRR+  D+   A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF
        L HLQI+GN LT+ GL+AILDGCP+LESLDLR CFNL L  G+L  +C+ +IK L LPHDP D  EF
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]7.9e-9872.31Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN +IQ  +EAEA NWL+LP+EVM M L+KL AI+IL+SAQ VCSSWRKICKDPLMWRVIDM N G+L     +D++LE MCRHAVDRSCGQL+DINI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        E FG DELL +I  SSNQLRRLR+ DCYDISDEG TEA+S+LPLLEHLEIF+ SFDVETLKTVGRCCPLLK LKL +  Y R  M  + EA AIAETMPK
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHD
        L HLQI GN LT+MGLQAILDGCP+LESLDLR CF+L L  G+L + CA R K+L+LPHD
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHD

XP_038883784.1 F-box protein SKIP19-like [Benincasa hispida]1.8e-8664.04Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN       E E+ NWLELP++VM M L KL  +DIL++AQ VCSSWRKIC+DPLMWRVIDM   GD      +DY+LE +CR AV RSCGQLVDINI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        E+FG D+LLH+I  SSNQL RLR++ C  ISDEG  EAVS+LPLLE LE+  CSFDVETL T+G+ CP LKSLKLN+ FYRR+  D+   A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF
        L HLQI+GN LT+ GL+AILDGCP LESLDLR CFNL L  G+L  +C+G+IK L +PHDP D  EF
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like1.1e-8965.3Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN    P +  EA NWLELP+++  M L+KL AI+ILSSAQ+VCS WRKICKDPLMWRV+DMHN+G+ +    +DY+LE MC  AVDRSCG+L+DINI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        + FG +ELL +I  SSNQLRRLRI+ C+ I+D G +EAVSKLPLLEHLEI LCSF  +TL+TVGRCC LLKSLKL+    RR  +D D +A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI
        L +LQI+G+ LTD GLQAILDGCP+LESLDLR CFNL L  G+L   CA RIK L LPHDP D  EFI
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI

A0A6J1CYW9 putative F-box/LRR-repeat protein 236.2e-8864.26Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN    P +E  A NWLELP++   M L+KL A+DILS+AQ VCS WRKIC DPLMWRV+DM NL D    + +D +LE MC  AVDRSCGQLVDINI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLC--SFDVETLKTVGRCCPLLKSLKL-NKPFYRRLWMDRDDEAFAIAET
        E FG DELLH+IA SSNQLRRLR++ C+DIS +G  EAV KLPLLE LEIF    SFD+ETLKTVGRCCPLL SLKL N+       M  D+EA AIAE 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLC--SFDVETLKTVGRCCPLLKSLKL-NKPFYRRLWMDRDDEAFAIAET

Query:  MPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFIYHNYQI
        MP L HL I+ N LTD+GLQAILDGCP LESLDLR C NL L  G+LE++C+ RIK L LP+DPID C+ +Y N  I
Subjt:  MPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFIYHNYQI

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.4e-8463.3Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN       E EA NWLELP++V  M L+KL  +DIL++AQ VCSSWRKIC+DPLMWRV+DM   GD      +DY+LE MCR AVDRSCGQL+ I I
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        E+FG D+LL +I  SSNQLR LR++ C  ISDEG  +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+ FYRR+  D+   A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF
        L HLQI+GN LT+ GL+AILDGCP+LESLDLR CFNL L  G+L  +C+ +IK L LPHDP D  EF
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.4e-8463.3Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN       E EA NWLELP++V  M L+KL  +DIL++AQ VCSSWRKIC+DPLMWRV+DM   GD      +DY+LE MCR AVDRSCGQL+ I I
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        E+FG D+LL +I  SSNQLR LR++ C  ISDEG  +AVSKLPLLE LEI   SFDVETL+T+G+C PLLKSLKLN+ FYRR+  D+   A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF
        L HLQI+GN LT+ GL+AILDGCP+LESLDLR CFNL L  G+L  +C+ +IK L LPHDP D  EF
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF

A0A6J1ILH5 F-box protein SKIP19-like4.4e-8664.04Show/hide
Query:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI
        MESN       E EA NWLELP++V  M L+KL  +DIL++AQ VCSSWRKIC+DPLMWRV+DM   GD      +DY+LE MCR AVDRSCGQL+ INI
Subjt:  MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI

Query:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK
        E+FG D+LL +I  SSNQLR+LR++ C  ISDEGF +AVSKLPLLE LEI   SFDVETL+T+G C PLLKSLKLN+ FYRR+  D+   A AIAE MP 
Subjt:  ENFGPDELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPK

Query:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF
        L HLQI+GN LT+ GL+AILDGCP+LESLDLR CFNL L  G+L  +C+ +IK L LPHDP D  EF
Subjt:  LHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEF

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 226.4e-5846.74Show/hide
Query:  EAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIE--NFGPDE
        + E + +NW ELP +++   L++L  ++IL +A+ VC SWR++ KDPL+WR IDM NL  L    Y  Y +E  CRH VD S G L++ NI+   F    
Subjt:  EAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIE--NFGPDE

Query:  LLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIY
        LL+++A  S+ LRRLR+     I+  G  EA+ KLPLLE LE+  CS + E  KT+G+ CP LK+LKL   F+  L  + D++A AIA+TMP L HLQ+ 
Subjt:  LLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIY

Query:  GNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI
         N LT++GL AILDGCP LE LDLR CFN+ L  G+LE +C  RIK    P+D +D   ++
Subjt:  GNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI

Q9M0U7 Putative F-box protein At4g054759.5e-5444.94Show/hide
Query:  MIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGP
        M   + + E  NW++LP E+    L++L   DIL +A+ +C +WR+ICKDP MWR I++ +       +  +++ E MCRH VD S G L++INIE+F  
Subjt:  MIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGP

Query:  DELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN-----------KPFYRRLWMDRDDEAFAI
        D LL +I   S  L+ L I     ++++G    + KLPLLE L IF  S  ++ LK +G  CP LK+LKLN           +  Y  L ++ DD+A AI
Subjt:  DELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN-----------KPFYRRLWMDRDDEAFAI

Query:  AETMPKLHHLQIYGNVLTDMGLQAILDGCPELES-LDLRGCFNLYLEEGELEERCAGRIKILYLPHD
        AE+MPKL HLQ+ GN LT+ GL AILDGCP LE  LD+R CFN+ L  G LE+RC  RIK L  PHD
Subjt:  AETMPKLHHLQIYGNVLTDMGLQAILDGCPELES-LDLRGCFNLYLEEGELEERCAGRIKILYLPHD

Q9M0U8 Putative F-box/LRR-repeat protein 211.1e-4943.4Show/hide
Query:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI-ENFGPDELLHHI
        E  NW++LP E+    L++L   DIL +AQ VC  WR+ICKDP MWR I+  +       +  +++   MCRH VD S G L++IN+ E+F  D LL +I
Subjt:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI-ENFGPDELLHHI

Query:  AHSSNQLRRLRILDCYD-ISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLW----------------MDRDDEAFAIA
          +   LR L +  C+  ++  G   A++K+PLLE LE+      ++ LK +G  CP LK+LKLN     RLW                ++ DD+A AIA
Subjt:  AHSSNQLRRLRILDCYD-ISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLW----------------MDRDDEAFAIA

Query:  ETMPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHD
        E+MPKLHHLQ+  N LT+ GL AILDGCP LE LD+R CF + L  G LE+RC   IK L  P D
Subjt:  ETMPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHD

Q9M0U9 F-box protein SKIP192.9e-7457.83Show/hide
Query:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLHHIA
        E+TNW ELP E+    L +L AI+IL +AQ VC SWR++CKDP MWR IDMHNLGDL+    +DYNLE MCRHAVDRS G LVDI I  FG  +LL++IA
Subjt:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLHHIA

Query:  HSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTD
        H S+ LR LR++ C  I+D+GF EAV KLP LE LE+  CSF VE+L+ VG+CC  +K+LKLNK   +    + DD+A AIAETMPKL HLQ+ GN L+D
Subjt:  HSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTD

Query:  MGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPI
         GL AILD C  LE LDLR CFN+ L  G+L++RC   +K++  P+D I
Subjt:  MGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPI

Q9S9V9 Putative F-box/LRR-repeat protein 232.4e-6552.02Show/hide
Query:  NWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLHHIAHSS
        NW ELPS++    L++L AI+IL +AQ VC  W ++CKDP MWR ID+ N  D  A     Y+LE MCRHAVDRS G L++I I  +G ++L+ +IA  S
Subjt:  NWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLHHIAHSS

Query:  NQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNK-PFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTDMG
        + L+ L ++ C+ I+DEG  +AVSK+PLLE+LE+  C F  E+L+ +GR CP LK+LKLN+ P         DD A AIAE+MP+L HLQ+ GN LT+ G
Subjt:  NQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNK-PFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTDMG

Query:  LQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPID
        L AILDGCP LE LDLR CFN+ L  G+L++RC  RIK L  P+D  D
Subjt:  LQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPID

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein2.0e-7557.83Show/hide
Query:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLHHIA
        E+TNW ELP E+    L +L AI+IL +AQ VC SWR++CKDP MWR IDMHNLGDL+    +DYNLE MCRHAVDRS G LVDI I  FG  +LL++IA
Subjt:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLHHIA

Query:  HSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTD
        H S+ LR LR++ C  I+D+GF EAV KLP LE LE+  CSF VE+L+ VG+CC  +K+LKLNK   +    + DD+A AIAETMPKL HLQ+ GN L+D
Subjt:  HSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTD

Query:  MGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPI
         GL AILD C  LE LDLR CFN+ L  G+L++RC   +K++  P+D I
Subjt:  MGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPI

AT4G05470.1 RNI-like superfamily protein7.8e-5143.4Show/hide
Query:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI-ENFGPDELLHHI
        E  NW++LP E+    L++L   DIL +AQ VC  WR+ICKDP MWR I+  +       +  +++   MCRH VD S G L++IN+ E+F  D LL +I
Subjt:  EATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINI-ENFGPDELLHHI

Query:  AHSSNQLRRLRILDCYD-ISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLW----------------MDRDDEAFAIA
          +   LR L +  C+  ++  G   A++K+PLLE LE+      ++ LK +G  CP LK+LKLN     RLW                ++ DD+A AIA
Subjt:  AHSSNQLRRLRILDCYD-ISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLW----------------MDRDDEAFAIA

Query:  ETMPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHD
        E+MPKLHHLQ+  N LT+ GL AILDGCP LE LD+R CF + L  G LE+RC   IK L  P D
Subjt:  ETMPKLHHLQIYGNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHD

AT4G05475.1 RNI-like superfamily protein6.8e-5544.94Show/hide
Query:  MIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGP
        M   + + E  NW++LP E+    L++L   DIL +A+ +C +WR+ICKDP MWR I++ +       +  +++ E MCRH VD S G L++INIE+F  
Subjt:  MIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGP

Query:  DELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN-----------KPFYRRLWMDRDDEAFAI
        D LL +I   S  L+ L I     ++++G    + KLPLLE L IF  S  ++ LK +G  CP LK+LKLN           +  Y  L ++ DD+A AI
Subjt:  DELLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLN-----------KPFYRRLWMDRDDEAFAI

Query:  AETMPKLHHLQIYGNVLTDMGLQAILDGCPELES-LDLRGCFNLYLEEGELEERCAGRIKILYLPHD
        AE+MPKL HLQ+ GN LT+ GL AILDGCP LE  LD+R CFN+ L  G LE+RC  RIK L  PHD
Subjt:  AETMPKLHHLQIYGNVLTDMGLQAILDGCPELES-LDLRGCFNLYLEEGELEERCAGRIKILYLPHD

AT4G05490.1 RNI-like superfamily protein4.5e-5946.74Show/hide
Query:  EAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIE--NFGPDE
        + E + +NW ELP +++   L++L  ++IL +A+ VC SWR++ KDPL+WR IDM NL  L    Y  Y +E  CRH VD S G L++ NI+   F    
Subjt:  EAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIE--NFGPDE

Query:  LLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIY
        LL+++A  S+ LRRLR+     I+  G  EA+ KLPLLE LE+  CS + E  KT+G+ CP LK+LKL   F+  L  + D++A AIA+TMP L HLQ+ 
Subjt:  LLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIY

Query:  GNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI
         N LT++GL AILDGCP LE LDLR CFN+ L  G+LE +C  RIK    P+D +D   ++
Subjt:  GNVLTDMGLQAILDGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFI

AT4G05497.1 RNI-like superfamily protein1.2e-4845.02Show/hide
Query:  QPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDE
        Q     E  NW ELP E+    L++L AI+IL +AQ VC SWR++C+DP MWR ID+    +L   + L Y +E +C  AVD S G L++INI+      
Subjt:  QPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDE

Query:  LLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEI-FLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQI
         L++IA  S+ LRRL ++DC  +   G  EA  KLPLLE L+I +  S   + LK VG+ CP L++LKLN     +     D  A AIAETMP L HLQ+
Subjt:  LLHHIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEI-FLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQI

Query:  YGNVLTDMGLQAILDGCPELESLDLRGCFNL
        + N L++ GL AIL+GCP L++L L  C N+
Subjt:  YGNVLTDMGLQAILDGCPELESLDLRGCFNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAACTACATGATTCAGCCAGAAGCAGAAGCGGAAGCGACGAACTGGCTTGAACTGCCTTCAGAAGTAATGATTATGAGTCTGGTGAAGCTATACGCCATTGA
TATACTCTCCAGCGCCCAAACCGTTTGCTCTTCGTGGCGTAAGATTTGCAAAGACCCTCTCATGTGGCGTGTGATCGATATGCACAATTTGGGTGATTTGAATGCTGATA
TGTATTTGGATTACAATTTGGAGGGTATGTGCAGACACGCTGTTGATCGTAGTTGTGGCCAATTGGTCGACATTAATATTGAGAACTTTGGCCCCGATGAATTGCTCCAC
CACATTGCTCACAGTTCAAATCAACTTAGAAGACTTCGGATTTTAGATTGCTATGACATTTCAGATGAGGGATTTACTGAAGCAGTTTCAAAACTTCCATTGTTGGAGCA
TCTTGAAATATTTCTCTGTTCATTTGATGTGGAAACTTTGAAAACTGTGGGAAGGTGTTGCCCTCTTTTGAAATCGCTGAAACTGAACAAGCCGTTTTATAGAAGACTAT
GGATGGATCGGGACGATGAGGCCTTTGCTATTGCTGAAACTATGCCTAAATTACACCACCTTCAAATATATGGCAATGTTCTAACTGACATGGGTTTGCAAGCTATTCTT
GATGGCTGCCCTGAGTTAGAATCTCTCGACCTACGCGGATGTTTCAATTTATATTTGGAGGAGGGAGAGTTGGAAGAAAGATGTGCTGGAAGGATAAAAATTTTGTATTT
GCCTCACGATCCAATTGATGGCTGTGAATTTATCTATCATAACTATCAAATACCCTGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGAACTACATGATTCAGCCAGAAGCAGAAGCGGAAGCGACGAACTGGCTTGAACTGCCTTCAGAAGTAATGATTATGAGTCTGGTGAAGCTATACGCCATTGA
TATACTCTCCAGCGCCCAAACCGTTTGCTCTTCGTGGCGTAAGATTTGCAAAGACCCTCTCATGTGGCGTGTGATCGATATGCACAATTTGGGTGATTTGAATGCTGATA
TGTATTTGGATTACAATTTGGAGGGTATGTGCAGACACGCTGTTGATCGTAGTTGTGGCCAATTGGTCGACATTAATATTGAGAACTTTGGCCCCGATGAATTGCTCCAC
CACATTGCTCACAGTTCAAATCAACTTAGAAGACTTCGGATTTTAGATTGCTATGACATTTCAGATGAGGGATTTACTGAAGCAGTTTCAAAACTTCCATTGTTGGAGCA
TCTTGAAATATTTCTCTGTTCATTTGATGTGGAAACTTTGAAAACTGTGGGAAGGTGTTGCCCTCTTTTGAAATCGCTGAAACTGAACAAGCCGTTTTATAGAAGACTAT
GGATGGATCGGGACGATGAGGCCTTTGCTATTGCTGAAACTATGCCTAAATTACACCACCTTCAAATATATGGCAATGTTCTAACTGACATGGGTTTGCAAGCTATTCTT
GATGGCTGCCCTGAGTTAGAATCTCTCGACCTACGCGGATGTTTCAATTTATATTTGGAGGAGGGAGAGTTGGAAGAAAGATGTGCTGGAAGGATAAAAATTTTGTATTT
GCCTCACGATCCAATTGATGGCTGTGAATTTATCTATCATAACTATCAAATACCCTGTTTGTGA
Protein sequenceShow/hide protein sequence
MESNYMIQPEAEAEATNWLELPSEVMIMSLVKLYAIDILSSAQTVCSSWRKICKDPLMWRVIDMHNLGDLNADMYLDYNLEGMCRHAVDRSCGQLVDINIENFGPDELLH
HIAHSSNQLRRLRILDCYDISDEGFTEAVSKLPLLEHLEIFLCSFDVETLKTVGRCCPLLKSLKLNKPFYRRLWMDRDDEAFAIAETMPKLHHLQIYGNVLTDMGLQAIL
DGCPELESLDLRGCFNLYLEEGELEERCAGRIKILYLPHDPIDGCEFIYHNYQIPCL