; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015883 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015883
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLOB domain-containing protein
Genome locationChr03:1100575..1101142
RNA-Seq ExpressionHG10015883
SyntenyHG10015883
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052511.1 LOB domain-containing protein 12-like [Cucumis melo var. makuwa]3.8e-2867.33Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E
        E
Subjt:  E

XP_008439580.1 PREDICTED: LOB domain-containing protein 12-like [Cucumis melo]3.8e-2867.33Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E
        E
Subjt:  E

XP_017218016.1 PREDICTED: transcription factor SPT20 homolog [Daucus carota subsp. sativus]2.5e-2747.48Show/hide
Query:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV
        LLRRKC  DC+FA +F ADQ QKF +VH+++GASNV KLLN+L  ++R  AA SL+YEA A   DP+HGC+G I IL+++L  LQ +L  A++EL+TY+ 
Subjt:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV

Query:  SEPKDVNILPLRWPDTNDIPRILQQPATPEQLLPATKQP
               +LP+     N +P+  Q+ A   Q++P   QP
Subjt:  SEPKDVNILPLRWPDTNDIPRILQQPATPEQLLPATKQP

XP_022146502.1 LOB domain-containing protein 36-like [Momordica charantia]8.5e-2861.17Show/hide
Query:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        N LRRKC  DC+FA HFPAD  +KFE   R YGASN+ K+ ++L  DERD+AA SL+YEAEA +IDPV+GCVGFI IL  RL  +Q++L  A+RELS Y+
Subjt:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV

Query:  VSE
         SE
Subjt:  VSE

XP_038881578.1 protein ASYMMETRIC LEAVES 2-like [Benincasa hispida]1.2e-4283.18Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKCLPDCIFA HFPADQ +KFEA+H IYGASNV KLLNQL+ DERD+AAKSLIYEAEAWQ DPVHGCVGFI ILQKRLN+LQ EL+IARRELSTY+VS
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E-PKDVN
        E P+D N
Subjt:  E-PKDVN

TrEMBL top hitse value%identityAlignment
A0A0A0KIS2 LOB domain-containing protein1.6e-2743.92Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA +FPADQ QKFE VHRIYGASNV K+L     DER++  KSL++EAEA   DPVHGCV FI  LQ+RL  LQTEL+I +++L +Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E------------PKDVN-----ILPLRWP-------------------------------DTNDIPR--ILQQPATPEQLLPATKQPP
        +            P + +     +LP +WP                               +T+D  R  + Q P T EQ+LPAT+QPP
Subjt:  E------------PKDVN-----ILPLRWP-------------------------------DTNDIPR--ILQQPATPEQLLPATKQPP

A0A161ZQA4 LOB domain-containing protein1.2e-2747.48Show/hide
Query:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV
        LLRRKC  DC+FA +F ADQ QKF +VH+++GASNV KLLN+L  ++R  AA SL+YEA A   DP+HGC+G I IL+++L  LQ +L  A++EL+TY+ 
Subjt:  LLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVV

Query:  SEPKDVNILPLRWPDTNDIPRILQQPATPEQLLPATKQP
               +LP+     N +P+  Q+ A   Q++P   QP
Subjt:  SEPKDVNILPLRWPDTNDIPRILQQPATPEQLLPATKQP

A0A1S3AYN9 LOB domain-containing protein 12-like1.8e-2867.33Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E
        E
Subjt:  E

A0A5D3CQL4 LOB domain-containing protein 12-like1.8e-2867.33Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  DCIFA HFPADQ +KFE VHRIYGASNV K+L  L  DER++   SL++EAEA   DPV GCV  I  LQ RL  LQTELSIARRELS+Y+ S
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  E
        E
Subjt:  E

A0A6J1CZR4 LOB domain-containing protein 36-like4.1e-2861.17Show/hide
Query:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV
        N LRRKC  DC+FA HFPAD  +KFE   R YGASN+ K+ ++L  DERD+AA SL+YEAEA +IDPV+GCVGFI IL  RL  +Q++L  A+RELS Y+
Subjt:  NLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYV

Query:  VSE
         SE
Subjt:  VSE

SwissProt top hitse value%identityAlignment
A2WXT0 LOB domain-containing protein 67.0e-2556.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCV  I ILQ+ L  LQ +L+ A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

O04479 Protein ASYMMETRIC LEAVES 24.8e-2656.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

Q32SG3 LOB domain-containing protein 61.8e-2552.29Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I ILQ  L  LQ +L+ A+ ELS Y  +
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  EPKDVNILP
             +  P
Subjt:  EPKDVNILP

Q8LQH4 LOB domain-containing protein 67.0e-2556.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC PDC+FA +FP D  QKF  VHR++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCV  I ILQ+ L  LQ +L+ A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

Q9FKZ3 LOB domain-containing protein 366.7e-2849.61Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  +C+FA +FP DQ QKF  VH+++GASNV KLLN+L S++R+ A  SL YEAEA   DPV+GCVG I ILQ RL  +  +L  A++EL+TYV  
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  EPKDVNILPLRWPDTNDIPRILQQPAT
        +     +LP+  P    +P   Q+P++
Subjt:  EPKDVNILPLRWPDTNDIPRILQQPAT

Arabidopsis top hitse value%identityAlignment
AT1G65620.1 Lateral organ boundaries (LOB) domain family protein3.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT1G65620.2 Lateral organ boundaries (LOB) domain family protein3.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT1G65620.3 Lateral organ boundaries (LOB) domain family protein3.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT1G65620.4 Lateral organ boundaries (LOB) domain family protein3.4e-2756.7Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY
        LRRKC P+C+FA +FP DQ QKF  VH+++GASNV KLLN+L+  +R+ A  SL YEA+    DPV+GCVG I +LQ +L  LQ +LS A+ ELS Y
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTY

AT5G66870.1 ASYMMETRIC LEAVES 2-like 14.8e-2949.61Show/hide
Query:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
        LRRKC  +C+FA +FP DQ QKF  VH+++GASNV KLLN+L S++R+ A  SL YEAEA   DPV+GCVG I ILQ RL  +  +L  A++EL+TYV  
Subjt:  LRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS

Query:  EPKDVNILPLRWPDTNDIPRILQQPAT
        +     +LP+  P    +P   Q+P++
Subjt:  EPKDVNILPLRWPDTNDIPRILQQPAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACA
TAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTG
ATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCA
GAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGACACTAATGATATACCGCGTATACTTCAACAACCAGCAACACCGGAGCAGTTGCTGCCGGCGACAAAGCA
GCCGCCGCCGCCACAAAATAACAGTGGGAGAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCACCATGTGCAGCATGTAAATCTTCTTAGAAGAAAATGTCTTCCAGATTGCATTTTTGCCACACATTTTCCAGCAGACCAGTTTCAAAAATTTGAAGCCGTACA
TAGAATTTACGGCGCAAGTAACGTTTGTAAGCTTCTTAATCAGTTGAACTCTGATGAGCGAGACCAAGCCGCTAAGTCTCTGATCTACGAGGCAGAGGCTTGGCAGATTG
ATCCTGTACATGGTTGCGTTGGCTTTATACCAATTCTTCAGAAGAGGCTTAATGATCTTCAAACTGAACTCTCGATCGCTCGACGAGAGCTTTCAACTTACGTAGTATCA
GAGCCAAAAGATGTAAATATTCTTCCGCTGAGGTGGCCGGACACTAATGATATACCGCGTATACTTCAACAACCAGCAACACCGGAGCAGTTGCTGCCGGCGACAAAGCA
GCCGCCGCCGCCACAAAATAACAGTGGGAGAGAATACTGA
Protein sequenceShow/hide protein sequence
MAHHVQHVNLLRRKCLPDCIFATHFPADQFQKFEAVHRIYGASNVCKLLNQLNSDERDQAAKSLIYEAEAWQIDPVHGCVGFIPILQKRLNDLQTELSIARRELSTYVVS
EPKDVNILPLRWPDTNDIPRILQQPATPEQLLPATKQPPPPQNNSGREY