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HG10015896 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015896
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationChr03:1255941..1256195
RNA-Seq ExpressionHG10015896
SyntenyHG10015896
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052524.1 hypothetical protein E6C27_scaffold120G001250 [Cucumis melo var. makuwa]1.8e-2988.1Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+REC+KNEYPAA  RSL+SS+T ASMAVGANSM+FVRNISR FSKF+D
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD

KAG6594447.1 hypothetical protein SDJN03_11000, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2378.57Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEER+CSK EYP ASP S + STTPA   V ANS +FVRNI+RSFS  ++
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD

KAG7034740.1 hypothetical protein SDJN02_04470, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-2088.41Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSM
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEER+ SKNEYP ASPRSL SSTTPA M V ANS+
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSM

KGN49420.1 hypothetical protein Csa_003492 [Cucumis sativus]5.3e-2986.9Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+REC+KNEYPAA PRSL+SSTT ASM V ANSM+FVRNISR FSK +D
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD

XP_025013214.1 uncharacterized protein LOC8284058 [Ricinus communis]3.1e-1356.18Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMA-----VGANSMHFVRNISRSFSKFSD
        MANSRIARF+TEVAPPQ ISV+RRR SK+LDTI+EEER+ S +   A++P S  S++T A+ A     V  NS +F R + RSFS F +
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMA-----VGANSMHFVRNISRSFSKFSD

TrEMBL top hitse value%identityAlignment
A0A0A0KI68 Uncharacterized protein2.6e-2986.9Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+REC+KNEYPAA PRSL+SSTT ASM V ANSM+FVRNISR FSK +D
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD

A0A3N7EZP9 Uncharacterized protein4.4e-1353.57Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD
        MANSRIA+F+TE APPQ I+V+R+R SK+LDTISEE+R+ + ++    SP S T  TT A+    ANS +F + I RSFS F +
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD

A0A5D3CN92 Uncharacterized protein8.8e-3088.1Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD
        MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEE+REC+KNEYPAA  RSL+SS+T ASMAVGANSM+FVRNISR FSKF+D
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD

A0A7N2LPW5 Uncharacterized protein4.4e-1356.32Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGA-----NSMHFVRNISRSFSKF
        MANSRIARFV+EVAPPQ ISV+R+RTSK+LDTI EEER+ S N+  A  PRS +S++T ++ A  A     +S +F+R +  SFS F
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGA-----NSMHFVRNISRSFSKF

B9S0W8 Uncharacterized protein1.5e-1356.18Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMA-----VGANSMHFVRNISRSFSKFSD
        MANSRIARF+TEVAPPQ ISV+RRR SK+LDTI+EEER+ S +   A++P S  S++T A+ A     V  NS +F R + RSFS F +
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMA-----VGANSMHFVRNISRSFSKFSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)5.3e-1154.93Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNE-YPAASPRSLTSS--TTPASMAVGANS
        MA SR+ARF+TEVAPPQ ++VMRRRT+KVLDTI EEERE   +  +P++      SS  T+P S +V + S
Subjt:  MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNE-YPAASPRSLTSS--TTPASMAVGANS

AT4G21060.1 Galactosyltransferase family protein6.7e-0660.98Show/hide
Query:  MANSRIARFVTEVAPPQIISVMRRR--TSKVLDTISEEERE
        MA SR+ARFV+EVAPPQ ++VMRR     + LDTI EEE +
Subjt:  MANSRIARFVTEVAPPQIISVMRRR--TSKVLDTISEEERE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATTCTCGTATAGCAAGGTTCGTTACCGAGGTCGCACCACCGCAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGA
GAGAGAGTGCAGCAAGAATGAGTATCCTGCTGCATCCCCAAGGAGCCTAACATCATCAACTACCCCTGCGTCTATGGCTGTTGGTGCCAATTCAATGCATTTCGTCAGAA
ACATAAGTAGATCTTTCTCCAAATTCAGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATTCTCGTATAGCAAGGTTCGTTACCGAGGTCGCACCACCGCAGATTATCAGTGTCATGAGACGCCGAACATCGAAAGTGTTGGACACCATCAGTGAAGAGGA
GAGAGAGTGCAGCAAGAATGAGTATCCTGCTGCATCCCCAAGGAGCCTAACATCATCAACTACCCCTGCGTCTATGGCTGTTGGTGCCAATTCAATGCATTTCGTCAGAA
ACATAAGTAGATCTTTCTCCAAATTCAGTGATTGA
Protein sequenceShow/hide protein sequence
MANSRIARFVTEVAPPQIISVMRRRTSKVLDTISEEERECSKNEYPAASPRSLTSSTTPASMAVGANSMHFVRNISRSFSKFSD