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HG10015917 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015917
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionVQ motif-containing protein 1-like
Genome locationChr03:1413393..1413737
RNA-Seq ExpressionHG10015917
SyntenyHG10015917
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052539.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]8.5e-3068.42Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL
        MGN KK A   EVRVV+IEYHHIQTD SNFKSVVQ LTGKHSS  E GGE CRKRQRVV  +N   I NIN         +S KMI T SFKDLDRLLSL
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL

Query:  HLPSLEDLNWIWTD
         LPS+EDL+WI TD
Subjt:  HLPSLEDLNWIWTD

KAG6581431.1 hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2457.02Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL
        M +SK   A G V+VV+IEYHH+ TDVSNFKSVVQ LTGKHSS VEGGG +C KR RV  E               S    +   + +TSFKDLDR L+L
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL

Query:  HLPSLEDLNWIWTD
        HLP+LEDLNWIW D
Subjt:  HLPSLEDLNWIWTD

KAG7034723.1 hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2457.02Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL
        M +SK   A G V+VV+IEYHH+ TDVS+FKSVVQ LTGKHSS VEGGG +CRKR RV  E               S    +   + +TSFKDLDR L+L
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL

Query:  HLPSLEDLNWIWTD
        HLP+LEDLNWIW D
Subjt:  HLPSLEDLNWIWTD

KGN49401.1 hypothetical protein Csa_003856 [Cucumis sativus]3.0e-2766.38Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVE-GGGESCRKRQRVVTE-DNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLL
        MGNSKK A   EVRVV+IEYHHIQTD SNFKSVVQ LTGKHS   E  GGE CRKRQRVV++ +N   I NIN         +  KMI T SFKDLDRLL
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVE-GGGESCRKRQRVVTE-DNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLL

Query:  SLHLPSLEDLNWIWTD
        +L LPS+EDLNWI TD
Subjt:  SLHLPSLEDLNWIWTD

XP_038881537.1 VQ motif-containing protein 10-like [Benincasa hispida]7.1e-4586.84Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL
        MGNSKK  A  EVRVVVIEYHHIQTDVSNFKSVVQ LTGKHSS VEGGGESC+KRQRVV E+NESII NI+FNDG  R+EESRKMIPTTSFKDLDRLLSL
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL

Query:  HLPSLEDLNWIWTD
        HLPS+EDLNWIWTD
Subjt:  HLPSLEDLNWIWTD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein1.5e-2766.38Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVE-GGGESCRKRQRVVTE-DNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLL
        MGNSKK A   EVRVV+IEYHHIQTD SNFKSVVQ LTGKHS   E  GGE CRKRQRVV++ +N   I NIN         +  KMI T SFKDLDRLL
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVE-GGGESCRKRQRVVTE-DNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLL

Query:  SLHLPSLEDLNWIWTD
        +L LPS+EDLNWI TD
Subjt:  SLHLPSLEDLNWIWTD

A0A5D3CN21 VQ motif-containing protein 1-like4.1e-3068.42Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL
        MGN KK A   EVRVV+IEYHHIQTD SNFKSVVQ LTGKHSS  E GGE CRKRQRVV  +N   I NIN         +S KMI T SFKDLDRLLSL
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSL

Query:  HLPSLEDLNWIWTD
         LPS+EDL+WI TD
Subjt:  HLPSLEDLNWIWTD

A0A6J1CYB0 uncharacterized protein LOC1110157001.7e-1245.95Show/hide
Query:  VRVVVIEYHHIQTDVSNFKSVVQRLTG---KHSSVVEG----GGESCRKRQRVV--TEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSLHLP
        V+VV+IEYHH+QTDVSNFKSVVQ LTG   + SS +       G++ ++R+R +     N++II         + F+     + T SFKDLDRLL  +LP
Subjt:  VRVVVIEYHHIQTDVSNFKSVVQRLTG---KHSSVVEG----GGESCRKRQRVV--TEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSLHLP

Query:  SLEDLNWIWTD
        S++DL+WIW D
Subjt:  SLEDLNWIWTD

A0A6J1EF02 VQ motif-containing protein 10-like1.5e-1652.03Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPT--------TSFK
        M NSK   A G V+VV IEYHHIQTDV+NFKSVVQ LTG +S+     G + RK++RV    +E+II+  +     +RFEES +   T        TSF+
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPT--------TSFK

Query:  DLD-RLLSLHLPSLEDLNWIWTD
        DLD  LL L LPS+EDLNWIW D
Subjt:  DLD-RLLSLHLPSLEDLNWIWTD

A0A6J1KT83 VQ motif-containing protein 102.0e-1650.86Show/hide
Query:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFE-ESRKMIPTTSFKDLD-RLL
        M NSK   A G V+VV IEYHHIQTDVSNFKSVVQ LTG +S+     G + RK+ RV  ++N   + +  F +     E ++   + +TSF+DLD  LL
Subjt:  MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFE-ESRKMIPTTSFKDLD-RLL

Query:  SLHLPSLEDLNWIWTD
         L LPS+EDLNWIW D
Subjt:  SLHLPSLEDLNWIWTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTCGAAGAAGGCGGCGGCGGTGGGGGAAGTGAGGGTGGTGGTAATTGAGTACCACCATATTCAGACCGACGTTTCCAACTTCAAGTCGGTCGTTCAACGTCT
CACCGGAAAGCATTCCTCCGTCGTGGAGGGCGGTGGAGAGAGCTGTAGGAAGAGGCAGCGAGTAGTGACTGAGGATAATGAGAGTATTATTAATAATATTAATTTTAATG
ACGGACACAGCCGGTTTGAAGAAAGTCGTAAGATGATCCCTACGACGTCGTTTAAGGACTTGGATCGGTTGCTCAGCCTCCACCTCCCTTCCCTGGAGGATCTTAACTGG
ATTTGGACTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTCGAAGAAGGCGGCGGCGGTGGGGGAAGTGAGGGTGGTGGTAATTGAGTACCACCATATTCAGACCGACGTTTCCAACTTCAAGTCGGTCGTTCAACGTCT
CACCGGAAAGCATTCCTCCGTCGTGGAGGGCGGTGGAGAGAGCTGTAGGAAGAGGCAGCGAGTAGTGACTGAGGATAATGAGAGTATTATTAATAATATTAATTTTAATG
ACGGACACAGCCGGTTTGAAGAAAGTCGTAAGATGATCCCTACGACGTCGTTTAAGGACTTGGATCGGTTGCTCAGCCTCCACCTCCCTTCCCTGGAGGATCTTAACTGG
ATTTGGACTGACTAA
Protein sequenceShow/hide protein sequence
MGNSKKAAAVGEVRVVVIEYHHIQTDVSNFKSVVQRLTGKHSSVVEGGGESCRKRQRVVTEDNESIINNINFNDGHSRFEESRKMIPTTSFKDLDRLLSLHLPSLEDLNW
IWTD