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HG10015924 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015924
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein, putative
Genome locationChr03:1484586..1485026
RNA-Seq ExpressionHG10015924
SyntenyHG10015924
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052545.1 hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa]4.3e-4270.81Show/hide
Query:  MGFKIPSSFSS-SPPNYLYFFQISLSLILFFLLISTSSS-KPLPYKSNGVLLRRHRTT--LHGGAP-TTPRRAVD-HQYQYYTTNKLQMEIKINK-SKKK
        MGFKIPSSFS  S PNYL FFQISLSLILFFL+ ST+SS KPLP++SN V    HR T  +HG A  TT  R VD H ++ Y + KL+MEIKINK SKK 
Subjt:  MGFKIPSSFSS-SPPNYLYFFQISLSLILFFLLISTSSS-KPLPYKSNGVLLRRHRTT--LHGGAP-TTPRRAVD-HQYQYYTTNKLQMEIKINK-SKKK

Query:  KK---VPEGFKSNNN-----KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP
        KK   VP GFKS+NN     KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLD P
Subjt:  KK---VPEGFKSNNN-----KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP

KAG6581427.1 hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3462.91Show/hide
Query:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPYKSNGVLLRRHRTTLHGGAPTT-----PRRAVDHQYQYYTTNKLQMEIKINKSKKKKK
        MGFKI S           FFQIS+SLILFFLLIS+SSS  L    + V L RHRTTLHGGAPTT     P+R VD     Y  NKLQM IK    K KKK
Subjt:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPYKSNGVLLRRHRTTLHGGAPTT-----PRRAVDHQYQYYTTNKLQMEIKINKSKKKKK

Query:  VPEGFKS---NNNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL
            F+S   NNNKG+AFSVMLPKGFVPPSGSSPCHN++PQSSS AFYCHL
Subjt:  VPEGFKS---NNNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL

KAG6594469.1 hypothetical protein SDJN03_11022, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2759.03Show/hide
Query:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPYKS-NGVLLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEG
        MGFKI  S S   PNYLY+  ISLSLILFFLLIS SS++PLP +  N     RHRTTLH GAPTT           +T  KLQME     +KKKKK    
Subjt:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPYKS-NGVLLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEG

Query:  FKSNNNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL
             NK +AFS MLPKGFVPPSGSSPCHNENP+   +AFYCHL
Subjt:  FKSNNNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL

KAG7026467.1 hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2759.03Show/hide
Query:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPY-KSNGVLLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEG
        MGFKI  S S   PNYLY+  ISLSLILFFLLIS+SS++PLP  + N     RHRTTLH GAPTT           +T  KLQME     +KKKKK    
Subjt:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPY-KSNGVLLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEG

Query:  FKSNNNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL
             NK +AFS MLPKGFVPPSGSSPCHNENP+   +AFYCHL
Subjt:  FKSNNNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL

KGN49393.1 hypothetical protein Csa_004373 [Cucumis sativus]1.8e-4069.33Show/hide
Query:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSS-KPLP-YKSNGVLLRRHRTT-LHGGAPTTPRRAVDHQYQY---YTTNKLQMEIKINK-SKK-
        MGFKIPSSFSS  PNYL FFQISLSLILFFLL  T+SS KPLP ++ + V   RHRTT +HG A TT RR VDH + +   Y +NKL+MEIKINK SKK 
Subjt:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSS-KPLP-YKSNGVLLRRHRTT-LHGGAPTTPRRAVDHQYQY---YTTNKLQMEIKINK-SKK-

Query:  -KKKV---PEGFKSN-----NNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP
         K+KV   P GFKS+     N+KGSAFS MLPKGFVPPSGSSPCHNE+PQSSSLAFYCHLD P
Subjt:  -KKKV---PEGFKSN-----NNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP

TrEMBL top hitse value%identityAlignment
A0A0A0KIK1 Uncharacterized protein8.7e-4169.33Show/hide
Query:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSS-KPLP-YKSNGVLLRRHRTT-LHGGAPTTPRRAVDHQYQY---YTTNKLQMEIKINK-SKK-
        MGFKIPSSFSS  PNYL FFQISLSLILFFLL  T+SS KPLP ++ + V   RHRTT +HG A TT RR VDH + +   Y +NKL+MEIKINK SKK 
Subjt:  MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSS-KPLP-YKSNGVLLRRHRTT-LHGGAPTTPRRAVDHQYQY---YTTNKLQMEIKINK-SKK-

Query:  -KKKV---PEGFKSN-----NNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP
         K+KV   P GFKS+     N+KGSAFS MLPKGFVPPSGSSPCHNE+PQSSSLAFYCHLD P
Subjt:  -KKKV---PEGFKSN-----NNKGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP

A0A444WWS8 Uncharacterized protein3.5e-1038.46Show/hide
Query:  STSSSKPLPYKSNGV-------LLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEGFKSNNNKGSAFSVMLPKGFVPPSGSSP
        S+SSS P+   +  +        L+ ++    G      RR V   Y+        M+ K NK+  K K      S+++   AFSVMLPKGFVPPSGSSP
Subjt:  STSSSKPLPYKSNGV-------LLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEGFKSNNNKGSAFSVMLPKGFVPPSGSSP

Query:  CHNENPQSSSLAFYCHL
        CHN+ P S+  +F+CHL
Subjt:  CHNENPQSSSLAFYCHL

A0A445BCG1 Uncharacterized protein2.5e-0859.65Show/hide
Query:  NKSKKKKKVPEGFKSNNNKGS-AFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL
        NK+K K K      S+++  S AFSVMLPKGFVPPSGSSPCHN+ P S+  +F+CHL
Subjt:  NKSKKKKKVPEGFKSNNNKGS-AFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL

A0A5A7UFQ9 Uncharacterized protein2.1e-4270.81Show/hide
Query:  MGFKIPSSFSS-SPPNYLYFFQISLSLILFFLLISTSSS-KPLPYKSNGVLLRRHRTT--LHGGAP-TTPRRAVD-HQYQYYTTNKLQMEIKINK-SKKK
        MGFKIPSSFS  S PNYL FFQISLSLILFFL+ ST+SS KPLP++SN V    HR T  +HG A  TT  R VD H ++ Y + KL+MEIKINK SKK 
Subjt:  MGFKIPSSFSS-SPPNYLYFFQISLSLILFFLLISTSSS-KPLPYKSNGVLLRRHRTT--LHGGAP-TTPRRAVD-HQYQYYTTNKLQMEIKINK-SKKK

Query:  KK---VPEGFKSNNN-----KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP
        KK   VP GFKS+NN     KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLD P
Subjt:  KK---VPEGFKSNNN-----KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP

A0A7J6ER19 Uncharacterized protein3.0e-0937.34Show/hide
Query:  LILFFLLISTSSSKPLPYK---------SNGVLLRRHRTTLHGGAPTTPRR----AVDHQYQY---------YTTNKLQM-------------EIKINKS
        LILFF+++S+SS+   P K         S+  L     TT H      PR     A D  Y+          +  NK+ M             + K  K+
Subjt:  LILFFLLISTSSSKPLPYK---------SNGVLLRRHRTTLHGGAPTTPRR----AVDHQYQY---------YTTNKLQM-------------EIKINKS

Query:  KKKKKVPEGFKSNNNK-----GSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL
        KKK  +    K  NNK       +FSVMLPKGFVPPSGSSPCHNENP  +S+ F+C L
Subjt:  KKKKKVPEGFKSNNNK-----GSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18335.1 unknown protein1.0e-0945.57Show/hide
Query:  RRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEGFKSNNN-----KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAF
        RR  +HQY YY  + L+    ++      K+    K NN      +   FSVMLPKGFVPPSGSSPCHN+NP S++  F
Subjt:  RRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEGFKSNNN-----KGSAFSVMLPKGFVPPSGSSPCHNENPQSSSLAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCAAGATTCCTTCCTCATTCTCCTCATCACCACCAAATTACCTTTACTTCTTCCAAATCTCTCTCTCTCTCATTCTCTTCTTTCTCCTAATTTCCACCTCTTC
TTCTAAACCCCTTCCCTACAAATCAAACGGCGTACTACTCCGCCGTCACCGGACCACCCTACACGGCGGCGCACCCACCACCCCACGGCGAGCAGTAGATCATCAATATC
AGTACTACACAACCAACAAATTACAAATGGAGATCAAAATTAACAAGAGCAAGAAGAAAAAGAAGGTCCCGGAGGGGTTTAAAAGCAATAATAATAAGGGAAGTGCTTTC
TCTGTAATGCTTCCGAAGGGATTTGTTCCTCCTTCCGGTTCTTCGCCTTGCCATAACGAAAATCCTCAATCATCATCTCTTGCCTTTTACTGCCATCTTGATCTGCCTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCAAGATTCCTTCCTCATTCTCCTCATCACCACCAAATTACCTTTACTTCTTCCAAATCTCTCTCTCTCTCATTCTCTTCTTTCTCCTAATTTCCACCTCTTC
TTCTAAACCCCTTCCCTACAAATCAAACGGCGTACTACTCCGCCGTCACCGGACCACCCTACACGGCGGCGCACCCACCACCCCACGGCGAGCAGTAGATCATCAATATC
AGTACTACACAACCAACAAATTACAAATGGAGATCAAAATTAACAAGAGCAAGAAGAAAAAGAAGGTCCCGGAGGGGTTTAAAAGCAATAATAATAAGGGAAGTGCTTTC
TCTGTAATGCTTCCGAAGGGATTTGTTCCTCCTTCCGGTTCTTCGCCTTGCCATAACGAAAATCCTCAATCATCATCTCTTGCCTTTTACTGCCATCTTGATCTGCCTTG
A
Protein sequenceShow/hide protein sequence
MGFKIPSSFSSSPPNYLYFFQISLSLILFFLLISTSSSKPLPYKSNGVLLRRHRTTLHGGAPTTPRRAVDHQYQYYTTNKLQMEIKINKSKKKKKVPEGFKSNNNKGSAF
SVMLPKGFVPPSGSSPCHNENPQSSSLAFYCHLDLP