; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10015946 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015946
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA-binding protein
Genome locationChr03:1657558..1660210
RNA-Seq ExpressionHG10015946
SyntenyHG10015946
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052566.1 DNA-binding protein [Cucumis melo var. makuwa]5.9e-4799.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]5.9e-4799.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

XP_022925641.1 DNA-binding protein DDB_G0278111-like isoform X1 [Cucurbita moschata]3.8e-4697.39Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVL+DDD
Subjt:  KVTIQRRRSVLEDDD

XP_031744105.1 DNA-binding protein DDB_G0278111 isoform X1 [Cucumis sativus]5.9e-4799.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]2.6e-47100Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0KKK2 Uncharacterized protein2.9e-4799.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

A0A1S3AZB0 DNA-binding protein DDB_G02781112.9e-4799.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

A0A5D3CSS6 DNA-binding protein2.9e-4799.13Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVLEDDD
Subjt:  KVTIQRRRSVLEDDD

A0A6J1IUM6 DNA-binding protein DDB_G0278111-like isoform X11.9e-4697.39Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVL+DDD
Subjt:  KVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X21.9e-4697.39Show/hide
Query:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
        MQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT
Subjt:  MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQT

Query:  KVTIQRRRSVLEDDD
        KVTIQRRRSVL+DDD
Subjt:  KVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O14737 Programmed cell death protein 52.9e-1244.21Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 52.9e-1244.21Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Q2HJH9 Programmed cell death protein 53.8e-1244.21Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781112.1e-1852.63Show/hide
Query:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK
        Q+L   +G G   +PE Q+ QE  R EA ERRQ +L QIL+  ARERL+RI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T 
Subjt:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK

Query:  VTIQRRRSVLEDDD
        +T++RR   +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 52.9e-1244.21Show/hide
Query:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        AQ+EA+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V   RR+ +  D+D
Subjt:  AQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein5.7e-4082.2Show/hide
Query:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
        MQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTT
Subjt:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT

Query:  KQTKVTIQRRRSVLEDDD
        KQTKVT QRRR V  DDD
Subjt:  KQTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein7.4e-4081.51Show/hide
Query:  MQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQT
        MQELMA++GM    G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QT
Subjt:  MQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQT

Query:  TKQTKVTIQRRRSVLEDDD
        TKQTKVT QRRR V  DDD
Subjt:  TKQTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein1.6e-3779.65Show/hide
Query:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
        MQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTT
Subjt:  MQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT

Query:  KQTKVTIQRRRSV
        KQTKVT+    +V
Subjt:  KQTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAACTCATGGCCCAGCGTGGCATGGGAAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCT
CAGTCAGATTCTGTCAATGCAAGCGAGAGAAAGACTTGCTCGAATTGCACTGGTTAAACCTGAGAAGGCAAGAGGTGTTGAAGATGTTATACTGAGAGCTGCACAGATGG
GCCAAATTGTAGAAAAGGTCTCTGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAACCAGACTACAAAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTT
CTTGAGGATGACGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAACTCATGGCCCAGCGTGGCATGGGAAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCT
CAGTCAGATTCTGTCAATGCAAGCGAGAGAAAGACTTGCTCGAATTGCACTGGTTAAACCTGAGAAGGCAAGAGGTGTTGAAGATGTTATACTGAGAGCTGCACAGATGG
GCCAAATTGTAGAAAAGGTCTCTGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAACCAGACTACAAAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTT
CTTGAGGATGACGATTAG
Protein sequenceShow/hide protein sequence
MQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSV
LEDDD