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HG10015966 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015966
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr03:1800363..1800776
RNA-Seq ExpressionHG10015966
SyntenyHG10015966
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]5.2e-1852.27Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        SK   P S WKV + N+L  P Q+LT+HCKSKD+DLGEH+L++G+ F W+FKENL STT +WC+  T         +VFW E+ +WLA
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]1.8e-1854.55Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        SK   PLS+WKV I ++L  P + L +HCKSKD+DLGEH+LQ+ Q+F W+FKENL STTL+WCT  T         +VFW E+  WLA
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

KAE8648119.1 hypothetical protein Csa_004728 [Cucumis sativus]2.1e-2256.99Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLASSAIF
        SKY    S W V I NEL   NQ L +HCKSKDD+LG+H ++ GQ++ W+FKEN + TTL+WCT  T P N H  FEVFWRE+GEWL S   F
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLASSAIF

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2059.09Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        SK   PLS+WKV I N+L  P QTL  HCKSK+DDLG+H LQ+G+ + WEFKEN+ISTT +WCTF T  LN     +VFW E   WLA
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]1.5e-1757.65Show/hide
Query:  EHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        E PLS WK+ I NE+     TL L CKSKDDDLG  NL + Q F W FKENL  TTLYWC    H    HA F VFW EK  WLA
Subjt:  EHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog2.0e-1550.56Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQ-IGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        SKY+ PL+ W V I N  +  N +L +HCKSKDDDLG H +Q  G+ + W FKEN + TT YWC F +     HA FEVFW E+G W +
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQ-IGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

A0A1S3C8Z6 S-protein homolog1.5e-1550.56Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQ-IGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        SKY+ PL+ W+V I N  +  N +L +HCKSKDDDLG H +Q  G+ + W FKEN + TT +WC F +     HA FEVFW E G WL+
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQ-IGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

A0A5A7UB41 S-protein homolog2.5e-1852.27Show/hide
Query:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        SK   P S WKV + N+L  P Q+LT+HCKSKD+DLGEH+L++G+ F W+FKENL STT +WC+  T         +VFW E+ +WLA
Subjt:  SKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

A0A6J1C659 S-protein homolog4.1e-1651.69Show/hide
Query:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLASSAIFS
        P S W+V I N L G +  LT+HCKSKDDDLGEH ++    + W+FKEN   TTL+WC F +  +  HA  EVFW EK +WLA    FS
Subjt:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLASSAIFS

A0A6J1GSD6 S-protein homolog7.7e-1549.38Show/hide
Query:  SQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA
        S W+V I N+L   + TL +HCKSKDDDLGEH ++ G  + W+F EN++ TTLYWC F++      A  +VFW EK  WL+
Subjt:  SQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLA

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 26.7e-0847.54Show/hide
Query:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFN
        P S+  V I+N+L G   TL  HCKSKDDDLG   LQ G+S+ + F       TLY+C+F+
Subjt:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFN

F4JLS0 S-protein homolog 13.4e-1244.59Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW
        +S+W+V + N L    +TL +HCKSK+DDLGE NL+    F W F EN++ +T +WC  N    N H    VFW
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW

P0DN93 S-protein homolog 291.2e-0945.9Show/hide
Query:  HPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTF
        +P ++  V ++N  + P  TLT+ C+SKDDDLGEH L  GQ+F+W+F+ +   TTL+ C F
Subjt:  HPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTF

Q2HQ46 S-protein homolog 748.4e-1140.54Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW
        +S+W+V ++N L    +TL +HCKSK++DLG+ NL+    F W F EN++ +TL+WC  +    + H   +VFW
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW

Q9FI84 S-protein homolog 278.2e-0640.98Show/hide
Query:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFN
        PL++  V  +N+ +     L +HCKSKDDDLG H  + G+ + W+F  N  ++TLY+C F+
Subjt:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFN

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family4.7e-0947.54Show/hide
Query:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFN
        P S+  V I+N+L G   TL  HCKSKDDDLG   LQ G+S+ + F       TLY+C+F+
Subjt:  PLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFN

AT4G16295.1 S-protein homologue 12.4e-1344.59Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW
        +S+W+V + N L    +TL +HCKSK+DDLGE NL+    F W F EN++ +T +WC  N    N H    VFW
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW

AT4G29035.1 Plant self-incompatibility protein S1 family6.0e-1240.54Show/hide
Query:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW
        +S+W+V ++N L    +TL +HCKSK++DLG+ NL+    F W F EN++ +TL+WC  +    + H   +VFW
Subjt:  LSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFW

AT5G04347.1 Plant self-incompatibility protein S1 family2.6e-0735.53Show/hide
Query:  ISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVFWREKGEWLA
        + NEL   N+ L + C+SKDD+LG+H L++GQ     F +N+   TL+WC     P    H  F+ +   + +W A
Subjt:  ISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVFWREKGEWLA

AT5G04350.1 Plant self-incompatibility protein S1 family1.9e-1038.55Show/hide
Query:  ISFSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVF
        I  S   H + + KV +SN+L   ++ L +HC+SKDDDLGEH L+IGQ + + F +N+  TT + C  +  P   +H +F  +
Subjt:  ISFSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFEVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATCAGCTTCTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGGTCCTAACCAGACGCTGACCCTCCATTGCAAATCAAA
AGACGACGATTTAGGTGAGCACAATCTCCAAATTGGACAGAGCTTTGTTTGGGAATTTAAGGAGAATTTGATATCAACCACCCTCTATTGGTGTACCTTCAACACTCATC
CTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGCGAATGGCTTGCTTCGAGTGCAATTTTTAGTTTTGCCTTTGGATCGCTCGAACTTCAGGCATTT
ATATTCAAAACATTTCTCAAGGTTCTATGGATGTTGTACATACTTGGGAACACTAGTCCCCCTCATCTCCCACTTTCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATCAGCTTCTCAAAATACGAACATCCATTGAGTCAATGGAAAGTGGGGATCTCAAACGAGTTGGTGGGTCCTAACCAGACGCTGACCCTCCATTGCAAATCAAA
AGACGACGATTTAGGTGAGCACAATCTCCAAATTGGACAGAGCTTTGTTTGGGAATTTAAGGAGAATTTGATATCAACCACCCTCTATTGGTGTACCTTCAACACTCATC
CTTTGAACTATCATGCTGAGTTCGAAGTGTTTTGGAGAGAGAAAGGCGAATGGCTTGCTTCGAGTGCAATTTTTAGTTTTGCCTTTGGATCGCTCGAACTTCAGGCATTT
ATATTCAAAACATTTCTCAAGGTTCTATGGATGTTGTACATACTTGGGAACACTAGTCCCCCTCATCTCCCACTTTCTTTTTGA
Protein sequenceShow/hide protein sequence
MFISFSKYEHPLSQWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQIGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFEVFWREKGEWLASSAIFSFAFGSLELQAF
IFKTFLKVLWMLYILGNTSPPHLPLSF