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HG10015967 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10015967
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr03:1801802..1802799
RNA-Seq ExpressionHG10015967
SyntenyHG10015967
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]2.6e-2052.94Show/hide
Query:  GMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLAS
        G PC      G K   PLS+WKV I ++L  P + L +HCKSKD+DLGEH+LQV Q+F W+FKENL STTL+WCT  T         +VFW E+  WLA 
Subjt:  GMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLAS

Query:  RC
        RC
Subjt:  RC

KAE8648119.1 hypothetical protein Csa_004728 [Cucumis sativus]5.5e-2350Show/hide
Query:  CSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCR
        CS+ S+   KY    S W V I NEL   NQ L +HCKSKDD+LG+H ++ GQ++ W+FKEN + TTL+WCT  T P N H  F VFWRE+GEWL SRC 
Subjt:  CSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCR

Query:  DQRALFERKE
         +  ++  ++
Subjt:  DQRALFERKE

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2259.57Show/hide
Query:  GLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCRD
        G K   PLS+WKV I N+L  P QTL  HCKSK+DDLG+H LQVG+ + WEFKEN+ISTT +WCTF T  LN     +VFW E   WLA RC D
Subjt:  GLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCRD

KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]7.4e-2045.24Show/hide
Query:  MICSIVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEF
        ++C I+ ++    G P +         E PLS WK+ I NE+     TL L CKSKDDDLG  NL V Q F W FKENL  TTLYWC    H    HA F
Subjt:  MICSIVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEF

Query:  NVFWREKGEWLASRCRDQRALFERKE
        NVFW EK  WLA RC+ +  ++  ++
Subjt:  NVFWREKGEWLASRCRDQRALFERKE

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]7.4e-2045.24Show/hide
Query:  MICSIVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEF
        ++C I+ ++    G P +         E PLS WK+ I NE+     TL L CKSKDDDLG  NL V Q F W FKENL  TTLYWC    H    HA F
Subjt:  MICSIVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEF

Query:  NVFWREKGEWLASRCRDQRALFERKE
        NVFW EK  WLA RC+ +  ++  ++
Subjt:  NVFWREKGEWLASRCRDQRALFERKE

TrEMBL top hitse value%identityAlignment
A0A314XJ22 S-protein homolog1.7e-1745.19Show/hide
Query:  MPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWRE---KGEWL
        +PC + S       +P++KW V + N++ G ++TL  HCKSKDDDLG  ++  G  F W FKEN   TTL+WC  N H  + HA F VFW E   K  WL
Subjt:  MPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWRE---KGEWL

Query:  ASRC
          RC
Subjt:  ASRC

A0A5A7UB41 S-protein homolog4.7e-2047.75Show/hide
Query:  IVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW
        +V+++A+ G      + L G K   P S WKV + N+L  P Q+LT+HCKSKD+DLGEH+L+VG+ F W+FKENL STT +WC+  T         +VFW
Subjt:  IVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW

Query:  REKGEWLASRC
         E+ +WLA RC
Subjt:  REKGEWLASRC

A0A5N6QHU0 S-protein homolog2.9e-1743.55Show/hide
Query:  IVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNEL-VGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVF
        +VL LA+G G   S  +++ + +  PL KW V + N + VG    L LHCKSKDDDLG   L+VGQ   W FKEN + TTLYWC       + HA  +VF
Subjt:  IVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNEL-VGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVF

Query:  WRE-KGEWLASRCRDQRALFERKE
        W E K +WL+ RC  +  ++  K+
Subjt:  WRE-KGEWLASRCRDQRALFERKE

A0A6J5VTZ1 S-protein homolog8.3e-1740.87Show/hide
Query:  MPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWRE---KGEWL
        +PC + S       +P++KW V + N++ G ++ L  HCKSKDDDLG  ++  G  F W FKEN   TTL+WC  N H  + HA F VFW E   K  WL
Subjt:  MPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWRE---KGEWL

Query:  ASRCRDQRALFERKE
          RC  +   +  K+
Subjt:  ASRCRDQRALFERKE

A0A6P5RY64 S-protein homolog1.7e-1745.19Show/hide
Query:  MPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWRE---KGEWL
        +PC + S       +P++KW V + N++ G ++TL  HCKSKDDDLG  ++  G  F W FKEN   TTL+WC  N H  + HA F VFW E   K  WL
Subjt:  MPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWRE---KGEWL

Query:  ASRC
          RC
Subjt:  ASRC

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.8e-0935.85Show/hide
Query:  PLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCRDQRALFERKEIDQ
        P SK  V I+N+L G   TL  HCKSKDDDLG   LQ G+S+ + F       TLY+C+F + P   H+ F+++   +     ++C   R +++ +    
Subjt:  PLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCRDQRALFERKEIDQ

Query:  REFCDE
          F DE
Subjt:  REFCDE

F4JLS0 S-protein homolog 11.2e-1245.95Show/hide
Query:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW
        +S+W+V + N L    +TL +HCKSK+DDLGE NL+    F W F EN++ +T +WC  N    N H   NVFW
Subjt:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW

P0DN92 S-protein homolog 242.2e-0636.67Show/hide
Query:  CSIVLMLAIGGGMPCSSASLRGLKYEHPL--SKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFN
        CSI ++  +   + CS A L+  + + P+     +V I N+    +  L +HCKS+DDDLG H L  G+ F W+F  N   +TLY+C F+
Subjt:  CSIVLMLAIGGGMPCSSASLRGLKYEHPL--SKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFN

P0DN93 S-protein homolog 294.2e-1047.54Show/hide
Query:  HPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTF
        +P +K  V ++N  + P  TLT+ C+SKDDDLGEH L  GQ+F+W+F+ +   TTL+ C F
Subjt:  HPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTF

Q2HQ46 S-protein homolog 741.9e-1040.54Show/hide
Query:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW
        +S+W+V ++N L    +TL +HCKSK++DLG+ NL+    F W F EN++ +TL+WC  +    + H    VFW
Subjt:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family2.0e-1035.85Show/hide
Query:  PLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCRDQRALFERKEIDQ
        P SK  V I+N+L G   TL  HCKSKDDDLG   LQ G+S+ + F       TLY+C+F + P   H+ F+++   +     ++C   R +++ +    
Subjt:  PLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEWLASRCRDQRALFERKEIDQ

Query:  REFCDE
          F DE
Subjt:  REFCDE

AT4G16295.1 S-protein homologue 18.5e-1445.95Show/hide
Query:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW
        +S+W+V + N L    +TL +HCKSK+DDLGE NL+    F W F EN++ +T +WC  N    N H   NVFW
Subjt:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW

AT4G29035.1 Plant self-incompatibility protein S1 family1.4e-1140.54Show/hide
Query:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW
        +S+W+V ++N L    +TL +HCKSK++DLG+ NL+    F W F EN++ +TL+WC  +    + H    VFW
Subjt:  LSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFW

AT5G04350.1 Plant self-incompatibility protein S1 family2.0e-1034.83Show/hide
Query:  HPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFNVFWREKGEWLASRCR
        H + + KV +SN+L   ++ L +HC+SKDDDLGEH L++GQ + + F +N+  TT + C  +  P   +H +F  +     + L + C+
Subjt:  HPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHP-LNYHAEFNVFWREKGEWLASRCR

AT5G06030.1 Plant self-incompatibility protein S1 family1.5e-0734.74Show/hide
Query:  ICSIVLMLAIGGGMPCSSA-SLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLN
        +CSI +M  +   + CS A  ++  K        +V I N     +  L +HCKS+DDDLG H L  G+ F W+F  N   +TL +C F+   +N
Subjt:  ICSIVLMLAIGGGMPCSSA-SLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGTAGCATTGTTTTGATGTTAGCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTTAAAATACGAACATCCATTGAGTAAATGGAAAGTGGG
GATTTCAAACGAATTGGTGGGTCCTAACCAGACGCTGACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGTTTTGTTTGGG
AATTCAAAGAGAATTTGATATCAACCACCCTCTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCACGCTGAGTTCAACGTGTTTTGGAGAGAGAAAGGCGAGTGG
CTTGCTTCCCGGTGTAGGGATCAACGTGCACTTTTCGAAAGAAAAGAAATAGATCAACGTGAGTTTTGTGATGAAGAATTAAAGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTGTAGCATTGTTTTGATGTTAGCAATTGGAGGTGGAATGCCATGTTCATCAGCTTCTTTGAGAGGTTTAAAATACGAACATCCATTGAGTAAATGGAAAGTGGG
GATTTCAAACGAATTGGTGGGTCCTAACCAGACGCTGACCCTCCATTGCAAATCAAAAGACGACGATTTGGGTGAGCACAATCTCCAAGTTGGACAGAGTTTTGTTTGGG
AATTCAAAGAGAATTTGATATCAACCACCCTCTATTGGTGCACCTTCAACACTCATCCTTTGAACTATCACGCTGAGTTCAACGTGTTTTGGAGAGAGAAAGGCGAGTGG
CTTGCTTCCCGGTGTAGGGATCAACGTGCACTTTTCGAAAGAAAAGAAATAGATCAACGTGAGTTTTGTGATGAAGAATTAAAGACCTAA
Protein sequenceShow/hide protein sequence
MICSIVLMLAIGGGMPCSSASLRGLKYEHPLSKWKVGISNELVGPNQTLTLHCKSKDDDLGEHNLQVGQSFVWEFKENLISTTLYWCTFNTHPLNYHAEFNVFWREKGEW
LASRCRDQRALFERKEIDQREFCDEELKT