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HG10016055 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016055
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDNA repair protein REV1
Genome locationChr03:2471030..2471641
RNA-Seq ExpressionHG10016055
SyntenyHG10016055
Gene Ontology termsGO:0042276 - error-prone translesion synthesis (biological process)
GO:0070987 - error-free translesion synthesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0017125 - deoxycytidyl transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043485.1 DNA repair protein REV1 isoform X1 [Cucumis melo var. makuwa]3.7e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

XP_016898826.1 PREDICTED: DNA repair protein REV1 isoform X1 [Cucumis melo]3.7e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

XP_016898828.1 PREDICTED: DNA repair protein REV1 isoform X2 [Cucumis melo]3.7e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

XP_016898829.1 PREDICTED: DNA repair protein REV1 isoform X3 [Cucumis melo]3.7e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

XP_038888412.1 DNA repair protein REV1 [Benincasa hispida]1.0e-6585.44Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG TLEKPKI MTTEKKYGTEDSLS VA+NL+D T SEV E IEYRA+MHSDSEMNLQDNADAELNEKSSDDLEAT L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDTNISD+D S EYKPQVCESFEM PRKDADV VQK PS  KCNYADEEPG+VDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

TrEMBL top hitse value%identityAlignment
A0A0A0K6E9 DNA repair protein REV12.6e-5979.11Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLV+NQPRLSEFFSM KG T+EKPKI +T+EKKY TEDSLS VAMNLKD TLSEVNES+ YRA++HSDSEMNLQ NADA+LNE SSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKPQ C SFEMLP+KDADV VQKGPS  K NYA EEPGI DVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

A0A1S4DS62 DNA repair protein REV11.8e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

A0A1S4DS66 DNA repair protein REV11.8e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

A0A1S4DS83 DNA repair protein REV11.8e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

A0A5A7TPZ8 DNA repair protein REV11.8e-6080.38Show/hide
Query:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL
        VPYQLDQLVSNQPRLSEFFSM KG T+EKPKI MT+EKKY TEDSLS VAMNLKD T+ EVNESI YRA+MHSDS MNLQ NADAE+NEKSSDDLEA  L
Subjt:  VPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIEYRAKMHSDSEMNLQDNADAELNEKSSDDLEATNL

Query:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA
        KDT+ISD+DVS EYKP  CESFEMLP+KDADV V KGPS  K NY DEEPGIVDVG++
Subjt:  KDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCACATTTTGCTGTATAACTTTGTCCCAATAAACAAAGAGGTCTCGAAGAGAAATGCATACCACATTTTGACCTTGGTAGCTGATATGGATCTCATTTTT
CTGTTTCTAAGGGTTCCTTACCAACTTGATCAACTTGTAAGTAATCAACCAAGATTATCAGAATTTTTTTCTATGACAAAAGGTCTGACGCTGGAGAAACCCAAA
ATTTTCATGACTACTGAAAAGAAATATGGAACAGAGGATTCACTGTCCTTGGTGGCTATGAATTTAAAGGATAACACTTTGTCTGAAGTGAACGAATCGATAGAA
TATAGAGCAAAGATGCATTCTGACTCTGAAATGAATCTTCAAGATAATGCAGATGCTGAACTGAATGAGAAGTCAAGTGATGATTTAGAGGCTACCAATCTAAAG
GATACAAATATATCCGATATAGATGTATCTACTGAATATAAACCACAAGTTTGTGAAAGTTTTGAGATGCTTCCTCGAAAGGATGCTGATGTAGGAGTACAAAAA
GGGCCAAGCAAAGGAAAATGTAATTATGCAGATGAAGAACCAGGAATTGTTGATGTGGGCAGAGCAGTGAAGAAAATATATATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCACATTTTGCTGTATAACTTTGTCCCAATAAACAAAGAGGTCTCGAAGAGAAATGCATACCACATTTTGACCTTGGTAGCTGATATGGATCTCATTTTT
CTGTTTCTAAGGGTTCCTTACCAACTTGATCAACTTGTAAGTAATCAACCAAGATTATCAGAATTTTTTTCTATGACAAAAGGTCTGACGCTGGAGAAACCCAAA
ATTTTCATGACTACTGAAAAGAAATATGGAACAGAGGATTCACTGTCCTTGGTGGCTATGAATTTAAAGGATAACACTTTGTCTGAAGTGAACGAATCGATAGAA
TATAGAGCAAAGATGCATTCTGACTCTGAAATGAATCTTCAAGATAATGCAGATGCTGAACTGAATGAGAAGTCAAGTGATGATTTAGAGGCTACCAATCTAAAG
GATACAAATATATCCGATATAGATGTATCTACTGAATATAAACCACAAGTTTGTGAAAGTTTTGAGATGCTTCCTCGAAAGGATGCTGATGTAGGAGTACAAAAA
GGGCCAAGCAAAGGAAAATGTAATTATGCAGATGAAGAACCAGGAATTGTTGATGTGGGCAGAGCAGTGAAGAAAATATATATCTAG
Protein sequenceShow/hide protein sequence
MDHILLYNFVPINKEVSKRNAYHILTLVADMDLIFLFLRVPYQLDQLVSNQPRLSEFFSMTKGLTLEKPKIFMTTEKKYGTEDSLSLVAMNLKDNTLSEVNESIE
YRAKMHSDSEMNLQDNADAELNEKSSDDLEATNLKDTNISDIDVSTEYKPQVCESFEMLPRKDADVGVQKGPSKGKCNYADEEPGIVDVGRAVKKIYI