; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016058 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016058
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein E6
Genome locationChr03:2487426..2488289
RNA-Seq ExpressionHG10016058
SyntenyHG10016058
Gene Ontology termsNA
InterPro domainsIPR040290 - Protein E6-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052668.1 protein E6 [Cucumis melo var. makuwa]1.6e-6355.81Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-----NNVDNFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPN
        MASS KL TSIL+L+LLFIQIHARESKYFFSK+P     NN +NFD KE QIPND+ VDPLTNPEKTTT+PQDQ+PNFIPQTQDN YGLYGHESGQLPPN
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-----NNVDNFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPN

Query:  SEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP---------------------------------
        S+ KF        GR FTTTTTY+NN+  +RNDVVSNYKSESEE   Y+ NN+N+N   FEN NSKP                                 
Subjt:  SEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP---------------------------------

Query:  -------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFV
                                                         EPHHYSRSRGYFGN  NNNNN N+YEY NSMGRYQNQNDEAEFQEEPDEFV
Subjt:  -------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFV

Query:  P
        P
Subjt:  P

KAE8647698.1 hypothetical protein Csa_002947 [Cucumis sativus]5.2e-5954.3Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-NFDTKENQIPND-KVDPLTNPEKTTTTPQ-DQEPNFIPQTQDNSYGLYGHESGQLPPNSE
        MASS  L TSIL+L+L F+QIHARESKYFFSK+P NNVD NFD KE QI ND KVDPLTNPEKTTT+ Q +Q+PNFIPQTQDN YGLYGHESGQLPPNS 
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-NFDTKENQIPND-KVDPLTNPEKTTTTPQ-DQEPNFIPQTQDNSYGLYGHESGQLPPNSE

Query:  DKF-----SRGGRPFTTTTTYN----NNNYRNDVVSNYKSESEE-YDYNNDNDN-----FENGNSKP---------------------------------
         KF        GR FTTTTTYN    NN ++NDVVSNYKSESEE Y+Y+ DN+N     FEN  SKP                                 
Subjt:  DKF-----SRGGRPFTTTTTYN----NNNYRNDVVSNYKSESEE-YDYNNDNDN-----FENGNSKP---------------------------------

Query:  ---------------------------------------------------EPHHYSR-SRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF
                                                           EPHHYSR SRGYFGNNNNNNGN+Y+Y NSMGRYQNQNDEAEFQEEPDEF
Subjt:  ---------------------------------------------------EPHHYSR-SRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF

Query:  VP
        VP
Subjt:  VP

XP_004134947.1 protein E6 [Cucumis sativus]5.2e-5954.3Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-NFDTKENQIPND-KVDPLTNPEKTTTTPQ-DQEPNFIPQTQDNSYGLYGHESGQLPPNSE
        MASS  L TSIL+L+L F+QIHARESKYFFSK+P NNVD NFD KE QI ND KVDPLTNPEKTTT+ Q +Q+PNFIPQTQDN YGLYGHESGQLPPNS 
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-NFDTKENQIPND-KVDPLTNPEKTTTTPQ-DQEPNFIPQTQDNSYGLYGHESGQLPPNSE

Query:  DKF-----SRGGRPFTTTTTYN----NNNYRNDVVSNYKSESEE-YDYNNDNDN-----FENGNSKP---------------------------------
         KF        GR FTTTTTYN    NN ++NDVVSNYKSESEE Y+Y+ DN+N     FEN  SKP                                 
Subjt:  DKF-----SRGGRPFTTTTTYN----NNNYRNDVVSNYKSESEE-YDYNNDNDN-----FENGNSKP---------------------------------

Query:  ---------------------------------------------------EPHHYSR-SRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF
                                                           EPHHYSR SRGYFGNNNNNNGN+Y+Y NSMGRYQNQNDEAEFQEEPDEF
Subjt:  ---------------------------------------------------EPHHYSR-SRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF

Query:  VP
        VP
Subjt:  VP

XP_008441080.1 PREDICTED: protein E6 [Cucumis melo]1.6e-6356.29Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-----NFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPP
        MASS KL TSIL+L+LLFIQIHARESKYFFSK+P NNVD     NFD KE QIPND+ VDPLTNPEKTTT+PQDQ+PNFIPQTQDN YGLYGHESGQLPP
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-----NFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPP

Query:  NSEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP--------------------------------
        NS+ KF        GR FTTTTTY+NN+  +RNDVVSNYKSESEE   Y+ NN+N+N   FEN NSKP                                
Subjt:  NSEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP--------------------------------

Query:  --------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF
                                                          EPHHYSRSRGYFGN  NNNNN N+YEY NSMGRYQNQNDEAEFQEEPDEF
Subjt:  --------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF

Query:  VP
        VP
Subjt:  VP

XP_038883950.1 protein E6-like [Benincasa hispida]2.9e-7060.63Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVDNFDTKENQIPNDKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDKF
        MASS KLLTSILLLSLL IQIHARESKYFFSKVP NNVDNFD KE Q+PN+K+DPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNS++KF
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVDNFDTKENQIPNDKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDKF

Query:  SRGGRPF-TTTTTYNNNN-YRNDVVSNYKSESEE-YDYNND--NDNFENGNSKP----------------------------------------------
        S GGRPF TTTTTY+NNN YRND V N K ESEE Y+YNN+  N+ FEN  SKP                                              
Subjt:  SRGGRPF-TTTTTYNNNN-YRNDVVSNYKSESEE-YDYNND--NDNFENGNSKP----------------------------------------------

Query:  -------------------------------------EPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP
                                             EPHHYSRSRGYFGNNNNNN NTYEY NSMGRYQNQNDEAEFQEEP+EFVP
Subjt:  -------------------------------------EPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP

TrEMBL top hitse value%identityAlignment
A0A0A0KLJ0 Uncharacterized protein2.5e-5954.3Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-NFDTKENQIPND-KVDPLTNPEKTTTTPQ-DQEPNFIPQTQDNSYGLYGHESGQLPPNSE
        MASS  L TSIL+L+L F+QIHARESKYFFSK+P NNVD NFD KE QI ND KVDPLTNPEKTTT+ Q +Q+PNFIPQTQDN YGLYGHESGQLPPNS 
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-NFDTKENQIPND-KVDPLTNPEKTTTTPQ-DQEPNFIPQTQDNSYGLYGHESGQLPPNSE

Query:  DKF-----SRGGRPFTTTTTYN----NNNYRNDVVSNYKSESEE-YDYNNDNDN-----FENGNSKP---------------------------------
         KF        GR FTTTTTYN    NN ++NDVVSNYKSESEE Y+Y+ DN+N     FEN  SKP                                 
Subjt:  DKF-----SRGGRPFTTTTTYN----NNNYRNDVVSNYKSESEE-YDYNNDNDN-----FENGNSKP---------------------------------

Query:  ---------------------------------------------------EPHHYSR-SRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF
                                                           EPHHYSR SRGYFGNNNNNNGN+Y+Y NSMGRYQNQNDEAEFQEEPDEF
Subjt:  ---------------------------------------------------EPHHYSR-SRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF

Query:  VP
        VP
Subjt:  VP

A0A1S3B2M6 protein E67.6e-6456.29Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-----NFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPP
        MASS KL TSIL+L+LLFIQIHARESKYFFSK+P NNVD     NFD KE QIPND+ VDPLTNPEKTTT+PQDQ+PNFIPQTQDN YGLYGHESGQLPP
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-NNVD-----NFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPP

Query:  NSEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP--------------------------------
        NS+ KF        GR FTTTTTY+NN+  +RNDVVSNYKSESEE   Y+ NN+N+N   FEN NSKP                                
Subjt:  NSEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP--------------------------------

Query:  --------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF
                                                          EPHHYSRSRGYFGN  NNNNN N+YEY NSMGRYQNQNDEAEFQEEPDEF
Subjt:  --------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEF

Query:  VP
        VP
Subjt:  VP

A0A5D3CMI3 Protein E67.6e-6455.81Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-----NNVDNFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPN
        MASS KL TSIL+L+LLFIQIHARESKYFFSK+P     NN +NFD KE QIPND+ VDPLTNPEKTTT+PQDQ+PNFIPQTQDN YGLYGHESGQLPPN
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVP-----NNVDNFDTKENQIPNDK-VDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPN

Query:  SEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP---------------------------------
        S+ KF        GR FTTTTTY+NN+  +RNDVVSNYKSESEE   Y+ NN+N+N   FEN NSKP                                 
Subjt:  SEDKF-----SRGGRPFTTTTTYNNNN--YRNDVVSNYKSESEE---YDYNNDNDN---FENGNSKP---------------------------------

Query:  -------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFV
                                                         EPHHYSRSRGYFGN  NNNNN N+YEY NSMGRYQNQNDEAEFQEEPDEFV
Subjt:  -------------------------------------------------EPHHYSRSRGYFGN--NNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFV

Query:  P
        P
Subjt:  P

A0A6J1EH17 protein E6-like8.4e-4749.28Show/hide
Query:  LTSILLLSLLFIQIHARESKYFFSKVPNNVDNFDTKENQIPNDKVDPLTNPEKTTTTP--QDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDKFSRGGRP
        L S LLL+LLF Q+HARES +FFSKVPNN   F TKE QIPN   DPLT+P+KT+ TP  QDQ+PNF+PQTQDN+YGLYGHESGQLPPNS+D FS G RP
Subjt:  LTSILLLSLLFIQIHARESKYFFSKVPNNVDNFDTKENQIPNDKVDPLTNPEKTTTTP--QDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDKFSRGGRP

Query:  FTTTTTYNNNNYRNDVVSNYKSESEEYDYNNDNDNFENGNSKP---------------------------------------------------------
               ++N YR +    YKSESEEYD   DNDNF+N N+KP                                                         
Subjt:  FTTTTTYNNNNYRNDVVSNYKSESEEYDYNNDNDNFENGNSKP---------------------------------------------------------

Query:  ----------------------------EPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP
                                    EPHHYSRSRGYF   NNNNGNTYEY NSMGRYQNQNDEAEFQEE D+FVP
Subjt:  ----------------------------EPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP

A0A6J1IU58 protein E6-like4.3e-5150.88Show/hide
Query:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVPNNVDNFDTKENQIPN--DKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDK
        MASSTKL+ S LLL+LLFIQ+HARES +FFSKVPNN   F TKE QIPN  ++ DPLTNP+KT+ TPQD +PNF+PQTQDN+YGLYGHESGQLPPNS+D 
Subjt:  MASSTKLLTSILLLSLLFIQIHARESKYFFSKVPNNVDNFDTKENQIPN--DKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDK

Query:  FSRGGRPFTTTTTYNNNNYRNDVVSNYKSESEEYDYNNDNDNFENGNSKP--------------------------------------------------
        FS G RP       ++N YR +   +YKSESEE+    DNDNF+NGN+KP                                                  
Subjt:  FSRGGRPFTTTTTYNNNNYRNDVVSNYKSESEEYDYNNDNDNFENGNSKP--------------------------------------------------

Query:  ---------------------------------EPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP
                                         EPHHYSRSRGYF  NNNNNGNTY+Y NSMGRYQNQNDEAEFQEE DEFVP
Subjt:  ---------------------------------EPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP

SwissProt top hitse value%identityAlignment
Q01197 Protein E68.2e-0733.73Show/hide
Query:  MASSTKLLT-SILLLSLLF-IQIHARESKYFFSKVPN-NVDNFDTKENQIPNDKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSED
        MASS KL + SIL L  LF +QIHARE   +FSK P  N++  +T   +  ++   P     +TT  P++QEP FIP+TQ N YGLYGHESG   P+   
Subjt:  MASSTKLLT-SILLLSLLF-IQIHARESKYFFSKVPN-NVDNFDTKENQIPNDKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSED

Query:  KFSRGGRPFTT---------------------TTTYNNNNYRNDVVSNY-----------KSESEEYDYNNDNDNFENGNS------------------K
        K +    P+ T                     T  YN N Y +    N              E++  +Y N N+ + NG                    K
Subjt:  KFSRGGRPFTT---------------------TTTYNNNNYRNDVVSNY-----------KSESEEYDYNNDNDNFENGNS------------------K

Query:  PE----PHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP
         E    P+ +  SRG   + N  N N Y   N+MGRY +QN E EF+E  +EF P
Subjt:  PE----PHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCAACCAAATTACTCACTTCTATCCTCCTTCTAAGTCTTCTGTTCATTCAAATCCATGCAAGAGAAAGCAAGTACTTCTTCAGTAAAGTACCCAACAATGT
TGACAACTTTGATACCAAAGAAAATCAAATCCCCAACGACAAAGTTGATCCTTTAACAAATCCAGAAAAAACCACCACTACCCCACAAGATCAAGAGCCTAATTTCATCC
CTCAAACCCAAGACAACAGCTACGGTCTCTACGGTCACGAATCCGGTCAGCTCCCCCCTAATTCCGAAGACAAATTCTCCCGTGGCGGCCGACCCTTTACCACCACCACC
ACCTACAACAACAACAACTATAGAAACGACGTCGTTTCTAACTACAAATCCGAGTCAGAAGAGTACGATTACAACAACGACAACGATAATTTTGAAAATGGCAACTCGAA
GCCGGAGCCACACCATTACAGCAGATCCAGGGGCTATTTCGGAAATAACAACAACAACAACGGCAACACATACGAATACAGTAATTCGATGGGAAGGTACCAGAACCAGA
ATGATGAAGCGGAATTCCAGGAGGAACCCGATGAGTTCGTGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCAACCAAATTACTCACTTCTATCCTCCTTCTAAGTCTTCTGTTCATTCAAATCCATGCAAGAGAAAGCAAGTACTTCTTCAGTAAAGTACCCAACAATGT
TGACAACTTTGATACCAAAGAAAATCAAATCCCCAACGACAAAGTTGATCCTTTAACAAATCCAGAAAAAACCACCACTACCCCACAAGATCAAGAGCCTAATTTCATCC
CTCAAACCCAAGACAACAGCTACGGTCTCTACGGTCACGAATCCGGTCAGCTCCCCCCTAATTCCGAAGACAAATTCTCCCGTGGCGGCCGACCCTTTACCACCACCACC
ACCTACAACAACAACAACTATAGAAACGACGTCGTTTCTAACTACAAATCCGAGTCAGAAGAGTACGATTACAACAACGACAACGATAATTTTGAAAATGGCAACTCGAA
GCCGGAGCCACACCATTACAGCAGATCCAGGGGCTATTTCGGAAATAACAACAACAACAACGGCAACACATACGAATACAGTAATTCGATGGGAAGGTACCAGAACCAGA
ATGATGAAGCGGAATTCCAGGAGGAACCCGATGAGTTCGTGCCATAA
Protein sequenceShow/hide protein sequence
MASSTKLLTSILLLSLLFIQIHARESKYFFSKVPNNVDNFDTKENQIPNDKVDPLTNPEKTTTTPQDQEPNFIPQTQDNSYGLYGHESGQLPPNSEDKFSRGGRPFTTTT
TYNNNNYRNDVVSNYKSESEEYDYNNDNDNFENGNSKPEPHHYSRSRGYFGNNNNNNGNTYEYSNSMGRYQNQNDEAEFQEEPDEFVP