; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016060 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016060
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationChr03:2505813..2507316
RNA-Seq ExpressionHG10016060
SyntenyHG10016060
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]1.2e-3893.81Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

XP_038880785.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida]8.4e-4095.88Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSAFRSTLARAPISARLTNGAK+KS  SPF IPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

XP_038880789.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X2 [Benincasa hispida]2.1e-3895.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISARLTNGAK+KS  SPF IPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE

XP_038880792.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X4 [Benincasa hispida]3.2e-3995.83Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSAFRSTLARAPISARLTNGAK+KS  SPF IPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

XP_038880793.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X5 [Benincasa hispida]2.1e-3895.79Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
        MSSAAAMAARSAFRSTLARAPISARLTNGAK+KS  SPF IPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPE

TrEMBL top hitse value%identityAlignment
A0A0A0KHP8 Uncharacterized protein1.1e-5077.36Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQVMY
        MSSAAAMAARSAFRSTLARAPIS R T+ AK KS  SPF IPKQNPLSQSHRILRSPVELSCC+ESLLPYHSATASALLTSMLSVSRRSYGWTPE     
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQVMY

Query:  EFSFFFLFIDGI------NFSNMTSMILICSTAQIAMMMYDECRMVRALALKRQDAEIK
            F   ++ I      + SN TSMILI ST QIAMMMYDE RMVRALALKRQDAEIK
Subjt:  EFSFFFLFIDGI------NFSNMTSMILICSTAQIAMMMYDECRMVRALALKRQDAEIK

A0A6J1EE17 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X25.9e-3993.81Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

A0A6J1IM12 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X12.2e-3893.75Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWT EG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

A0A6J1IM18 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X52.2e-3893.75Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWT EG
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

A0A6J1IR78 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X35.9e-3993.81Show/hide
Query:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ
        MSSAAAMAARSAFRSTLARA IS RLTNGAKVKSP+SPF IPKQNPLSQSHRILRSPVE+SCCVESLLPYHSATASALLTSMLSVSRRSYGWT EGQ
Subjt:  MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQ

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.6e-0946.74Show/hide
Query:  SSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPF-GIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGW
        +SA    ARS  R+  +R+  ++     ++ KS    F    +++PL      LR+PVELS CVESLLPYHSATASAL+TS LS+S ++YGW
Subjt:  SSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPF-GIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGW

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein2.1e-1759.78Show/hide
Query:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS FRS  +RA  +A R + G K    S  + F +PKQ+PL  ++RI RSPVELSCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT1G28395.2 unknown protein2.1e-1759.78Show/hide
Query:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS FRS  +RA  +A R + G K    S  + F +PKQ+PL  ++RI RSPVELSCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT1G28395.3 unknown protein2.1e-1759.78Show/hide
Query:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS FRS  +RA  +A R + G K    S  + F +PKQ+PL  ++RI RSPVELSCCVE++LPYH+ATASALL SMLSVSRR  GW  +G
Subjt:  AARSAFRSTLARAPISA-RLTNGAK--VKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG

AT2G33847.1 unknown protein1.1e-1862.79Show/hide
Query:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWT
        AARS FRS + RA ++A  +      S  S F +PKQ+PL  SHRI RSPVELSCCVE++LPYH+ATASALL SMLSVS RS  WT
Subjt:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWT

AT2G33847.2 unknown protein3.0e-1961.8Show/hide
Query:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG
        AARS FRS + RA ++A  +      S  S F +PKQ+PL  SHRI RSPVELSCCVE++LPYH+ATASALL SMLSVS RS  WT +G
Subjt:  AARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCCCCTATCTCCGCCAGACTTACCAACGGTGCCAAAGTCAAATCACCCTCATC
TCCCTTCGGCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAGTTGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACTTCTATGCTTTCAGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGGTCAGGTTATGTATGAATTTTCTTTTTTCTTTTTGTTCATTGAT
GGCATTAATTTTAGTAATATGACAAGTATGATATTGATTTGTTCTACCGCTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGTTCGAGCACTTGCCCTCAAAAG
ACAAGATGCTGAAATAAAGTCATGTATTGCTTGTTTTTCGTGTTCAAGTAGTTCAGTGACATTGGGTTTTTATAGCAGTAGGAAGAAACAAACTCATAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGCCGCTGCCATGGCTGCTAGGTCAGCCTTCAGATCAACCCTAGCCCGAGCCCCTATCTCCGCCAGACTTACCAACGGTGCCAAAGTCAAATCACCCTCATC
TCCCTTCGGCATCCCCAAGCAGAACCCACTCTCCCAATCCCATCGCATTTTGAGGTCTCCTGTTGAGTTGAGTTGCTGTGTGGAATCGTTGCTTCCTTACCACTCTGCTA
CTGCCTCTGCATTGCTTACTTCTATGCTTTCAGTCTCTCGTCGAAGCTACGGTTGGACTCCTGAAGGTCAGGTTATGTATGAATTTTCTTTTTTCTTTTTGTTCATTGAT
GGCATTAATTTTAGTAATATGACAAGTATGATATTGATTTGTTCTACCGCTCAGATTGCAATGATGATGTATGATGAATGTCGGATGGTTCGAGCACTTGCCCTCAAAAG
ACAAGATGCTGAAATAAAGTCATGTATTGCTTGTTTTTCGTGTTCAAGTAGTTCAGTGACATTGGGTTTTTATAGCAGTAGGAAGAAACAAACTCATAACTGA
Protein sequenceShow/hide protein sequence
MSSAAAMAARSAFRSTLARAPISARLTNGAKVKSPSSPFGIPKQNPLSQSHRILRSPVELSCCVESLLPYHSATASALLTSMLSVSRRSYGWTPEGQVMYEFSFFFLFID
GINFSNMTSMILICSTAQIAMMMYDECRMVRALALKRQDAEIKSCIACFSCSSSSVTLGFYSSRKKQTHN