; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016071 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016071
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationChr03:2579863..2582126
RNA-Seq ExpressionHG10016071
SyntenyHG10016071
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-4973.43Show/hide
Query:  MANSEDQGW----DDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRF
        M +S DQGW    ++   EEEDDD+D++EIG V+DER++R+A +G R GSGGGR++V RCQAD CN DL+GAR YHRRHKVCEFH+K A VILAGLEQRF
Subjt:  MANSEDQGW----DDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRF

Query:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS
        CQQCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDF GQSS
Subjt:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]1.8e-6184.4Show/hide
Query:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC
        MANSEDQGW+D  V+++DDDNDNEEIG V++ERRRRS LT  RGG GGGRSTVARCQADGCNADL+GA+PYHRRHKVCEFH++ A VILAGLEQRFCQQC
Subjt:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN
        SRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSS N
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]6.3e-5983.1Show/hide
Query:  MANSEDQGWDDTTV-EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQ
        MANS D  W+D  + +++DDDND EE+G V++ERRRRS LT GRGG GGGRSTVARCQADGCNADL+GARPYHRRHKVCEFHAK A VILAGLEQRFCQQ
Subjt:  MANSEDQGWDDTTV-EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN
        CSRFHAVSEFDDTKRSCR RLAGHNERRRKILPDFHGQSS N
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]4.5e-4973.76Show/hide
Query:  MANSEDQGWDDTT--VEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQ
        M NS DQGW D     EEE++++D++E+G VEDER++R A++  R GSGGGR++VARCQAD CN DL+GAR YHRRHKVCEFH+K A VILAGLEQRFCQ
Subjt:  MANSEDQGWDDTT--VEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS
        QCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDF GQSS
Subjt:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]1.5e-6390.07Show/hide
Query:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC
        M NSEDQ W+D  VEE+DD++DNEEIG VEDERRRRSALTGGRGGSGGGR TVARCQADGCNADLS ARPYHRRHKVCEFHAK A VILAGLEQRFCQQC
Subjt:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN
        SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS N
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein8.6e-6284.4Show/hide
Query:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC
        MANSEDQGW+D  V+++DDDNDNEEIG V++ERRRRS LT  RGG GGGRSTVARCQADGCNADL+GA+PYHRRHKVCEFH++ A VILAGLEQRFCQQC
Subjt:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN
        SRFHA+SEFDDTKRSCR RLAGHNERRRKILPDFHGQSS N
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN

A0A1S3AZN8 squamosa promoter-binding protein 13.1e-5983.1Show/hide
Query:  MANSEDQGWDDTTV-EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQ
        MANS D  W+D  + +++DDDND EE+G V++ERRRRS LT GRGG GGGRSTVARCQADGCNADL+GARPYHRRHKVCEFHAK A VILAGLEQRFCQQ
Subjt:  MANSEDQGWDDTTV-EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN
        CSRFHAVSEFDDTKRSCR RLAGHNERRRKILPDFHGQSS N
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSSAN

A0A6J1CK81 squamosa promoter-binding protein 19.5e-4578.74Show/hide
Query:  EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKR
        EEE+D     E+G  E+ER+ R AL+GGR G G GRSTVARCQADGCNADLSGARPYHRRHKVCEFHAK A VILAGLEQRFCQQCSRFHAVSEFD+TKR
Subjt:  EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKR

Query:  SCRRRLAGHNERRRKIL-PDFHGQSSA
        SCRRRLAGHNERRRK L  +FHG  S+
Subjt:  SCRRRLAGHNERRRKIL-PDFHGQSSA

A0A6J1EFR3 Squamosa promoter-binding-like protein1.9e-4872.03Show/hide
Query:  MANSEDQGW----DDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRF
        M +S DQGW    ++   EEE++D+D++EIG V+DER++R+A +G R GSGGGR++V RCQAD CN DL+GAR YHRRHKVCEFH+K A VILAGLEQRF
Subjt:  MANSEDQGW----DDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRF

Query:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS
        CQQCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDF GQSS
Subjt:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS

A0A6J1KYC6 Squamosa promoter-binding-like protein2.2e-4973.76Show/hide
Query:  MANSEDQGWDDTT--VEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQ
        M NS DQGW D     EEE++++D++E+G VEDER++R A++  R GSGGGR++VARCQAD CN DL+GAR YHRRHKVCEFH+K A VILAGLEQRFCQ
Subjt:  MANSEDQGWDDTT--VEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS
        QCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDF GQSS
Subjt:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 104.6e-2862.14Show/hide
Query:  LVEDERRRRSALTGGRG-GSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNER
        L  D    RS L G  G G GG      RCQA+GC ADLSGA+ YHRRHKVCE+HAK + V  +G +QRFCQQCSRFH ++EFD+ KRSCR+RLA HN R
Subjt:  LVEDERRRRSALTGGRG-GSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNER

Query:  RRK
        RRK
Subjt:  RRK

A3C057 Squamosa promoter-binding-like protein 173.5e-2860.58Show/hide
Query:  SALTGGRGGSGGGRSTVA--------RCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRR
        S  +GG G  G G +  A        RCQ +GC  DLSG +PY+ RHKVC  HAKE  V++AGLEQRFCQQCSRFH + EFD  K+SCRRRLAGHNERRR
Subjt:  SALTGGRGGSGGGRSTVA--------RCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRR

Query:  KILP
        K  P
Subjt:  KILP

Q0E3F8 Squamosa promoter-binding-like protein 51.2e-2870.59Show/hide
Query:  RCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS
        RCQA+GC ADLS A+ YHRRHKVC+FHAK AAV+ AG +QRFCQQCSRFH ++EFD+ KRSCR+RL  HN RRRK  P   GQSS
Subjt:  RCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFHGQSS

Q2R3Y1 Putative squamosa promoter-binding-like protein 193.5e-2866.29Show/hide
Query:  GGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK
        GG GG GGG      C  DGC +DLS  R YHRRHKVCE HAK   V++AG EQRFCQQCSRFH ++EFDD K+SCR+RL GHN RRRK
Subjt:  GGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK

Q38741 Squamosa promoter-binding protein 12.9e-3053.33Show/hide
Query:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC
        +  S++QG      EEEDD        + ED ++ R+    G+  SG   ST   CQ + C A+++ A+PYHRRHKVCEFHAK   V+ +GL+QRFCQQC
Subjt:  MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFH
        SRFH +SEFD+ KRSCRRRLAGHNERRRK   D H
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFH

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 85.6e-2969.32Show/hide
Query:  GRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK
        G  G     ST  RCQA+GCNADLS A+ YHRRHKVCEFH+K + V+ AGL QRFCQQCSRFH +SEFD+ KRSCR+RLA HN RRRK
Subjt:  GRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK

AT1G53160.2 squamosa promoter binding protein-like 42.0e-2653.91Show/hide
Query:  SEDQGW--DDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCS
        S+ QG+    + + EED + D +     E+E   R  + G RG    G S +  CQ D C AD+  A+ YHRRHKVCE HAK ++V L+GL QRFCQQCS
Subjt:  SEDQGW--DDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCS

Query:  RFHAVSEFDDTKRSCRRRLAGHNERRRK
        RFH + EFD+ KRSCRRRLAGHNERRRK
Subjt:  RFHAVSEFDDTKRSCRRRLAGHNERRRK

AT2G33810.1 squamosa promoter binding protein-like 34.7e-2853.78Show/hide
Query:  EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKR
        EEE+++ + E+    E+E        G    S G       CQ + C AD+S A+ YH+RHKVC+FHAK   V ++GL QRFCQQCSRFHA+SEFD+ KR
Subjt:  EEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKR

Query:  SCRRRLAGHNERRRKILPD
        SCRRRLAGHNERRRK   D
Subjt:  SCRRRLAGHNERRRKILPD

AT2G42200.1 squamosa promoter binding protein-like 98.9e-2761.11Show/hide
Query:  RGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILP
        RGG  G    + RCQ +GC  DL+ A+ Y+ RH+VC  H+K   V +AG+EQRFCQQCSRFH + EFD  KRSCRRRLAGHNERRRK  P
Subjt:  RGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILP

AT3G60030.1 squamosa promoter-binding protein-like 128.0e-2849.61Show/hide
Query:  EEIGLVEDERRRRSALTGGRGGSGGG----------RSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTK
        EE  L +D+  R +   GG    G G           S    CQ D C ADLS  + YHRRHKVCE H+K    ++ G+ QRFCQQCSRFH + EFD+ K
Subjt:  EEIGLVEDERRRRSALTGGRGGSGGG----------RSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFDDTK

Query:  RSCRRRLAGHNERRRKILPDFHGQSSA
        RSCRRRLAGHN+RRRK  PD  G  ++
Subjt:  RSCRRRLAGHNERRRKILPDFHGQSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGACGACACGACGGTGGAAGAAGAAGACGACGACAACGATAACGAAGAAATAGGGTTAGTAGAAGATGAAAGGAGGAGGAGATC
AGCTTTAACCGGTGGTCGAGGTGGCAGCGGAGGAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATCTGAGCGGTGCCAGACCATACCACCGCC
GCCACAAGGTCTGCGAGTTCCATGCCAAGGAGGCGGCGGTGATTCTGGCCGGGTTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGAT
GACACAAAGAGAAGCTGCCGGAGGCGTTTGGCTGGTCACAATGAACGCCGCCGCAAAATCCTACCGGACTTCCACGGACAATCCTCCGCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGACGACACGACGGTGGAAGAAGAAGACGACGACAACGATAACGAAGAAATAGGGTTAGTAGAAGATGAAAGGAGGAGGAGATC
AGCTTTAACCGGTGGTCGAGGTGGCAGCGGAGGAGGGAGGTCAACGGTGGCGCGTTGCCAAGCCGATGGCTGCAATGCCGATCTGAGCGGTGCCAGACCATACCACCGCC
GCCACAAGGTCTGCGAGTTCCATGCCAAGGAGGCGGCGGTGATTCTGGCCGGGTTGGAACAGCGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCAGAGTTCGAT
GACACAAAGAGAAGCTGCCGGAGGCGTTTGGCTGGTCACAATGAACGCCGCCGCAAAATCCTACCGGACTTCCACGGACAATCCTCCGCTAATTAA
Protein sequenceShow/hide protein sequence
MANSEDQGWDDTTVEEEDDDNDNEEIGLVEDERRRRSALTGGRGGSGGGRSTVARCQADGCNADLSGARPYHRRHKVCEFHAKEAAVILAGLEQRFCQQCSRFHAVSEFD
DTKRSCRRRLAGHNERRRKILPDFHGQSSAN