; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016088 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016088
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationChr03:2715108..2722751
RNA-Seq ExpressionHG10016088
SyntenyHG10016088
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604444.1 General transcription and DNA repair factor IIH subunit TFB2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-20884.7Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]2.2e-21085.59Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]4.1e-20984.92Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]2.7e-20884.7Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]7.1e-20985.14Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLP MKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLIHGEVLAREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLT+EQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWED KNMRLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 21.1e-21085.59Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYID PVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 22.5e-19680.57Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWF
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF

Query:  IPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRK                                                           QIVTFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 24.8e-20378Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFL
        LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK                                                           QIVTFL
Subjt:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----------------------------------------------------------QIVTFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKAD+HTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 27.1e-20784.26Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLY NAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 22.0e-20984.92Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPV+AKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRE TY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLIHGEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKADIHTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 42.2e-4327.52Show/hide
Query:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRLNPTFQA
        +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRLNPTFQA

Query:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------------
        Y + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS                     
Subjt:  YIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------------

Query:  ----------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
                                                 ++A   + +QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  ----------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

P60027 General transcription factor IIH subunit 49.7e-4427.37Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRL

Query:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS               
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------

Query:  ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
                                                       ++A   + +QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Q680U9 General transcription and DNA repair factor IIH subunit TFB21.4e-17067.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR  +Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

Q6CLR2 General transcription and DNA repair factor IIH subunit TFB21.3e-4024.44Show/hide
Query:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRLNPTFQANLQK
        D +  LP     +LYE+   C AI R L P+AK F++ ML+ D  VS + +++WV PD   + + ++  +  L + IE  + K+ +  RLNP F+ + + 
Subjt:  DMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRLNPTFQANLQK

Query:  LLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE
        +L  GE+       ++      S   L+ Y+ ++WE  L  ++ +     P      V+ + Q  GL+ + +    ++T  GFQFLL + NAQ+W ++ +
Subjt:  LLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQ-KGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIRE

Query:  YISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKD-SWFIPTKLATNLSM------------------------
        Y+  AE   +DP D+++F+  L     G+AY  D L+  QR  ++D+ D GL+   Q + D + F PT+LAT L+                         
Subjt:  YISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKD-SWFIPTKLATNLSM------------------------

Query:  -----------------------------------------------------------------SLADSSSRKQIVTFLQQNAHPR-------------
                                                                         +L +  + +QI+ +L+ +AHPR             
Subjt:  -----------------------------------------------------------------SLADSSSRKQIVTFLQQNAHPR-------------

Query:  -----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR
             V E +  +P  V DQIRLW+ +L+R+     + Y +F S + ++   DYA++   LLW++ K     V  + ++ + +  RR
Subjt:  -----VAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRR

Q92759 General transcription factor IIH subunit 49.7e-4427.37Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRL
        +V +  +N  + +  L    LD+LY +   C A+ R LP LAK +V++ML+++ P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRL

Query:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------
        T AQLWY + +Y+  A+ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS               
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS---------------

Query:  ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
                                                       ++A   + +QI+ FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  ----------------------------------------------MSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related9.6e-17267.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR  +Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.2 transcription factor-related9.6e-17267.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR  +Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ

AT4G17020.3 transcription factor-related9.6e-17267.78Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY
        MPQVKIIAKNFMDMVASLPA+KLD+LY N FICEAILRSLPPLAKK+VLQMLYID PV A  MEEWVL DG SK++VA+DRLIQLR+F E +DRKR  +Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTY

Query:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----
        TNAQLWYIIREYI NAEER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK     
Subjt:  TNAQLWYIIREYISNAEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRK-----

Query:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
                                                              QI+TFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  ------------------------------------------------------QIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK+++H  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCACTGGCTAAGAAGTTTGTTTTACAAATGCTGTACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTTCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAATGACCTACAGGCTAAATCCAACGTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCAATGCCTTCAAATATAACCGTGAGGCTCCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTAGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACGCTGAGGAGCGAGGC
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGAACAGAGGTATGCTATTAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAGGACAGTTGGTTTATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTAGCAGATTCTTCTTCAA
GGAAACAGATAGTTACTTTTCTACAGCAGAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGAT
CTTAATAGAGTCGATATTACTCCTGCACATTTTTACGATGAATTTCCTTCCAGGGAAGTTTTTGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGA
GGATTCGAAAAACATGCGACTGGTAGTGAAGGCAGACATACACACACATATGCGGGAACATCTTCGGCGTCAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTTATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGATCAACTCTATGAGAATGCATTCATCTGCGAAGCCATTCT
CAGGTCACTTCCACCACTGGCTAAGAAGTTTGTTTTACAAATGCTGTACATTGATGCTCCAGTTTCAGCCAAGTCCATGGAGGAGTGGGTTCTCCCAGATGGAGTCTCAA
AGTATAAGGTTGCTGTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAATGACCTACAGGCTAAATCCAACGTTCCAAGCAAACCTC
CAAAAGCTTTTAATACATGGTGAAGTTCTAGCCAGAGAACCAATGCCTTCAAATATAACCGTGAGGCTCCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTAGATCAGTG
GGAGTGCTTCTTGCTGCAATTGATAAACTCGGGCCAAGCAGAGAAGCCATCAAATATTAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTTTAAGTCAGAGGGATA
AAGAAGCTCCACGATTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACGCTGAGGAGCGAGGC
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCACGTGACAGGAGAGGCTTATGATATTGATACACTGACAGAAGAACAGAGGTATGCTATTAAGGA
CCTTGCTGATCTGGGACTAGTTAAGCTTCAGCAGGGTAGAAAGGACAGTTGGTTTATACCTACTAAATTAGCCACAAATCTTTCAATGAGTTTAGCAGATTCTTCTTCAA
GGAAACAGATAGTTACTTTTCTACAGCAGAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGTTATGGGAATCAGAT
CTTAATAGAGTCGATATTACTCCTGCACATTTTTACGATGAATTTCCTTCCAGGGAAGTTTTTGAGGCTGCTTGCGACTACGCACGAGAATGGAATGGGTTGCTATGGGA
GGATTCGAAAAACATGCGACTGGTAGTGAAGGCAGACATACACACACATATGCGGGAACATCTTCGGCGTCAAAAGTAG
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDQLYENAFICEAILRSLPPLAKKFVLQMLYIDAPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKREMTYRLNPTFQANL
QKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERG
VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESD
LNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADIHTHMREHLRRQK