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HG10016128 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016128
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCHCH domain-containing protein
Genome locationChr03:3037295..3037810
RNA-Seq ExpressionHG10016128
SyntenyHG10016128
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134733.1 uncharacterized protein LOC101211873 [Cucumis sativus]9.9e-6084.35Show/hide
Query:  MISLKPSTHHNG--SSFPYNSSNLQQKLIPIIRI-KPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR
        MISLKPSTHHNG  +SFPYNSS  QQ  IPIIRI KPNF+   H  TTFR  A+  GSG G Q+RTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLL+
Subjt:  MISLKPSTHHNG--SSFPYNSSNLQQKLIPIIRI-KPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]3.3e-6386.81Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA
        MISLKPS HHNGSSF  NSSNL QKL PI R + NF PP    TTFR+RAEQ  SGNGAQRRTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLL+VIA
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]2.3e-6487.5Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA
        MISLKPS HHNGSSF  NSSNL QKL PI R++ NF PPF   TTFR+RAEQ  SGNGAQRRTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLL+VIA
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]3.9e-6486.81Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA
        MISLKPS HHNGSSF +NSSNL QKL PI R + NF PPF   TTF++RAEQ  SGNGAQRRTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLL+VIA
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]4.2e-6691.84Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIP-IIRIKPNFAPPFHI-NTTFRVRAEQ-GGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR
        MISL PSTHHNGSSF YNSSNLQQ  IP IIRIKPNFAPPFH   TTFR +AEQ G SGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIP-IIRIKPNFAPPFHI-NTTFRVRAEQ-GGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein4.8e-6084.35Show/hide
Query:  MISLKPSTHHNG--SSFPYNSSNLQQKLIPIIRI-KPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR
        MISLKPSTHHNG  +SFPYNSS  QQ  IPIIRI KPNF+   H  TTFR  A+  GSG G Q+RTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLL+
Subjt:  MISLKPSTHHNG--SSFPYNSSNLQQKLIPIIRI-KPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLR

Query:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1CKG5 uncharacterized protein LOC1110124325.0e-4974.51Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINT------TFR---VRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTIS
        MISL P  + NGSSFP+ SSN    L+ +  I  NFA P   N+       FR   VRAEQ G GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLTIS
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINT------TFR---VRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTIS

Query:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  SLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1GCY7 uncharacterized protein LOC1114530371.6e-6386.81Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA
        MISLKPS HHNGSSF  NSSNL QKL PI R + NF PP    TTFR+RAEQ  SGNGAQRRTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLL+VIA
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6J1ISV2 uncharacterized protein LOC1114781111.1e-6487.5Show/hide
Query:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA
        MISLKPS HHNGSSF  NSSNL QKL PI R++ NF PPF   TTFR+RAEQ  SGNGAQRRTFLT+EEAGLVEVSGLSTHERFLCRLTISSLNLL+VIA
Subjt:  MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIA

Query:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
Subjt:  EEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

A0A6P4A1U2 uncharacterized protein LOC1074220011.2e-3962.67Show/hide
Query:  MISLKP-STHHNGSSF--PYNSSNLQQKLIPIIRIKPNFAPPFHINTTFR---VRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLN
        M+SLKP  THH  SS   P+N  N+ ++    IR     AP   ++ + R    + E+G     +QRRTFLT+EEAGLVE+SGL THERFLCRLTISSLN
Subjt:  MISLKP-STHHNGSSF--PYNSSNLQQKLIPIIRIKPNFAPPFHINTTFR---VRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLN

Query:  LLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF
        LLRVIAE+E CSIEELNAGR+CDWF+KDKLKREQN+DSAVLQWDDS+  F
Subjt:  LLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein1.5e-3472.53Show/hide
Query:  EQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD
        E+    N  +RR+FL++ EAGLVE+SGL  HE+FLCRLTISSLNLLRVI+E+E CSIEELNAG++CDWFLKDKLKRE N++SAVLQWDD D
Subjt:  EQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCACTCAAACCCTCCACTCACCACAACGGATCCTCATTCCCTTACAATTCTTCAAATCTTCAACAAAAACTCATTCCAATCATTAGAATTAAGCCCAATTTCGC
ACCTCCATTCCACATCAACACAACCTTCAGAGTCCGCGCCGAACAAGGCGGATCAGGCAACGGCGCTCAAAGACGAACTTTCTTGACCATCGAAGAAGCCGGCCTCGTAG
AAGTATCCGGCCTCAGTACGCACGAACGATTTCTGTGCCGTTTAACCATATCGTCTCTGAATTTACTGAGAGTGATAGCGGAGGAAGAGAAATGTTCCATCGAAGAGTTG
AATGCGGGAAGATTATGCGACTGGTTTCTCAAGGATAAGTTGAAGAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGACGATTCTGACCCTCTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCACTCAAACCCTCCACTCACCACAACGGATCCTCATTCCCTTACAATTCTTCAAATCTTCAACAAAAACTCATTCCAATCATTAGAATTAAGCCCAATTTCGC
ACCTCCATTCCACATCAACACAACCTTCAGAGTCCGCGCCGAACAAGGCGGATCAGGCAACGGCGCTCAAAGACGAACTTTCTTGACCATCGAAGAAGCCGGCCTCGTAG
AAGTATCCGGCCTCAGTACGCACGAACGATTTCTGTGCCGTTTAACCATATCGTCTCTGAATTTACTGAGAGTGATAGCGGAGGAAGAGAAATGTTCCATCGAAGAGTTG
AATGCGGGAAGATTATGCGACTGGTTTCTCAAGGATAAGTTGAAGAGAGAGCAGAATTTGGATTCTGCTGTTCTTCAATGGGACGATTCTGACCCTCTCTTCTGA
Protein sequenceShow/hide protein sequence
MISLKPSTHHNGSSFPYNSSNLQQKLIPIIRIKPNFAPPFHINTTFRVRAEQGGSGNGAQRRTFLTIEEAGLVEVSGLSTHERFLCRLTISSLNLLRVIAEEEKCSIEEL
NAGRLCDWFLKDKLKREQNLDSAVLQWDDSDPLF