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HG10016175 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016175
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPatatin
Genome locationChr03:3349134..3349493
RNA-Seq ExpressionHG10016175
SyntenyHG10016175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603769.1 hypothetical protein SDJN03_04378, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5084.87Show/hide
Query:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN
        MYKGMSRSRS SEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERH  S  IS DA RRSD KGSFWL+SLTWKWKKRK NNGI PNICSAVE SKSN
Subjt:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN

Query:  RFNGIPGFGYRILKDDFPI
        RFNGIPGF YRILK DFPI
Subjt:  RFNGIPGFGYRILKDDFPI
XP_008441098.1 PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo]3.0e-5491.67Show/hide
Query:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERH  SHTI  +ALRRSDSKGSFWLLSLTWKWKKRK+NNGI PNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_011658506.1 uncharacterized protein LOC105436036 [Cucumis sativus]2.3e-5491.67Show/hide
Query:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERH  SHTIS +ALRRSDS+GSFWLLSLTWKWKKRK NNG+ PNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_022977336.1 uncharacterized protein LOC111477686 [Cucurbita maxima]3.1e-5185.71Show/hide
Query:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN
        MYKGMSRSRSFSEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERH  S  IS DA RRSD KGSFWL+SLTWKWKKRK NNGI PNICSAVE SKSN
Subjt:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN

Query:  RFNGIPGFGYRILKDDFPI
        RFNGIPGF YRILK DFPI
Subjt:  RFNGIPGFGYRILKDDFPI
XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]3.1e-5996.64Show/hide
Query:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN
        MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERH GSHTIS DALRRSDSKGSFWLLSLTWKWKKRK+NNGI PNICSAVEFSKSN
Subjt:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN

Query:  RFNGIPGFGYRILKDDFPI
        RFNGIPGFGYRILKDDFPI
Subjt:  RFNGIPGFGYRILKDDFPI
TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein1.1e-5491.67Show/hide
Query:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFTKLELERH  SHTIS +ALRRSDS+GSFWLLSLTWKWKKRK NNG+ PNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A1S3B3D8 uncharacterized protein LOC1034853251.5e-5491.67Show/hide
Query:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERH  SHTI  +ALRRSDSKGSFWLLSLTWKWKKRK+NNGI PNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A5D3CRM5 Uncharacterized protein1.5e-5491.67Show/hide
Query:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERH  SHTI  +ALRRSDSKGSFWLLSLTWKWKKRK+NNGI PNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGG-VAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A6J1EEE9 uncharacterized protein LOC1114335718.3e-5082.79Show/hide
Query:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN
        MY+G+SRS SFSE+MG VAPLAIGTRGT+GSLVMKEIEYFTKLELERH GS  +S DA RRSDSK SFWLLSL+WKWKKR++NNGI PNICSAVE SKSN
Subjt:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN

Query:  RFNGIPGFGYRILKDD---FPI
        RFNGIPGFGYRILKDD   FPI
Subjt:  RFNGIPGFGYRILKDD---FPI
A0A6J1IJL8 uncharacterized protein LOC1114776861.5e-5185.71Show/hide
Query:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN
        MYKGMSRSRSFSEKM G+APLAIGTRGTVGSLVMKEIEYFTK E+ERH  S  IS DA RRSD KGSFWL+SLTWKWKKRK NNGI PNICSAVE SKSN
Subjt:  MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSN

Query:  RFNGIPGFGYRILKDDFPI
        RFNGIPGF YRILK DFPI
Subjt:  RFNGIPGFGYRILKDDFPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein3.5e-1643.12Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHDGSHTISADALR---RSDSKGSFWLLSLTWKWKKRKSNNG---IFPNICSAVEFSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF        + +   G+   + +  +   RS S+   W     W+ KKR++  G    FP++CSAVE S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTKL-----ELERHDGSHTISADALR---RSDSKGSFWLLSLTWKWKKRKSNNG---IFPNICSAVEFSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAAGGGATGAGCAGAAGCAGAAGCTTCTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCTCTGGTGATGAAGGAGAT
TGAGTACTTCACCAAGCTTGAGCTCGAACGCCATGACGGCTCTCACACTATAAGTGCAGATGCTTTGAGACGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTAA
CTTGGAAGTGGAAGAAGAGAAAAAGCAACAATGGGATTTTCCCTAACATTTGCTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTCGGTTAC
AGGATTCTCAAAGATGACTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAAGGGATGAGCAGAAGCAGAAGCTTCTCTGAGAAAATGGGTGGTGTTGCTCCACTTGCAATTGGCACGCGAGGCACTGTGGGGTCTCTGGTGATGAAGGAGAT
TGAGTACTTCACCAAGCTTGAGCTCGAACGCCATGACGGCTCTCACACTATAAGTGCAGATGCTTTGAGACGAAGCGATTCTAAAGGAAGCTTTTGGCTTTTGTCCTTAA
CTTGGAAGTGGAAGAAGAGAAAAAGCAACAATGGGATTTTCCCTAACATTTGCTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTCGGTTAC
AGGATTCTCAAAGATGACTTTCCCATTTGA
Protein sequenceShow/hide protein sequence
MYKGMSRSRSFSEKMGGVAPLAIGTRGTVGSLVMKEIEYFTKLELERHDGSHTISADALRRSDSKGSFWLLSLTWKWKKRKSNNGIFPNICSAVEFSKSNRFNGIPGFGY
RILKDDFPI