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HG10016178 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016178
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:3360281..3360622
RNA-Seq ExpressionHG10016178
SyntenyHG10016178
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49119.1 hypothetical protein Csa_003853 [Cucumis sativus]1.1e-4589.38Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MS VL + R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        QTNFAN P+LLSS
Subjt:  QTNFANLPLLLSS

XP_008439979.1 PREDICTED: uncharacterized protein LOC103484604 [Cucumis melo]9.3e-4588.5Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSFVL + RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        QT FAN P+LLSS
Subjt:  QTNFANLPLLLSS

XP_022142336.1 uncharacterized protein LOC111012478 [Momordica charantia]1.5e-4284.96Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSF+LI  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        +   ANL   LSS
Subjt:  QTNFANLPLLLSS

XP_023003962.1 uncharacterized protein LOC111497408 [Cucurbita maxima]1.7e-4385.84Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSFVL+ S  NGYSKVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        +TNFANLP LLSS
Subjt:  QTNFANLPLLLSS

XP_038883675.1 uncharacterized protein LOC120074584 [Benincasa hispida]1.2e-4793.81Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSFVLI  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQV+SQIRNCKSLFG K
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        QT+F N PLLLSS
Subjt:  QTNFANLPLLLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KJX3 Uncharacterized protein5.3e-4689.38Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MS VL + R NGY KVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLK+LKKSAM SISTLKIGVYKQV++QIRNCKSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        QTNFAN P+LLSS
Subjt:  QTNFANLPLLLSS

A0A1S3B0N9 uncharacterized protein LOC1034846044.5e-4588.5Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSFVL + RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        QT FAN P+LLSS
Subjt:  QTNFANLPLLLSS

A0A5D3CMA4 Uncharacterized protein4.5e-4588.5Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSFVL + RPNGY KVDKEDPEEII RRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFG+RLKKLKKSAMASISTLK+GVYKQV++QIRN KSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        QT FAN P+LLSS
Subjt:  QTNFANLPLLLSS

A0A6J1CLW2 uncharacterized protein LOC1110124787.2e-4384.96Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSF+LI  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERA+SMGKPSYLRIRIRRLKVRFGRRLKKLKKSA+ASIS  KIGVYKQV+ Q+RNCKSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        +   ANL   LSS
Subjt:  QTNFANLPLLLSS

A0A6J1KP23 uncharacterized protein LOC1114974088.5e-4485.84Show/hide
Query:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK
        MSFVL+ S  NGYSKVDKEDPEEIIHRRAQF+INKVLERADSMGK SYLRIRIRRL+VRFGRRLKKLKKSAMASI  +KI VYKQ++ QIRNCKSLFGRK
Subjt:  MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRK

Query:  QTNFANLPLLLSS
        +TNFANLP LLSS
Subjt:  QTNFANLPLLLSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein6.5e-1240.86Show/hide
Query:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF
        RP  YSK+DKEDPEE++ RRA+FLI K L+ AD + +     S++R+++  LKV+ G+RL KL++S ++++     G+ K   + +R  K +F
Subjt:  RPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGK----PSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLF

AT4G04745.1 unknown protein8.4e-1235.59Show/hide
Query:  VLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCK
        +++ + P  Y+K++KEDP+E+IHRRAQFLI KVLERADS  +    R         IR+  +++R G++L+KL+K+     + L     K     +  C 
Subjt:  VLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLR---------IRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCK

Query:  SLFGRKQTNFANLPLLLS
        S         ++LP L S
Subjt:  SLFGRKQTNFANLPLLLS

AT4G21902.1 unknown protein8.7e-0935.4Show/hide
Query:  PNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKVRFGRRLKKLKKSAMASISTLKIG-VYKQVVSQIRNCKSLFGR
        PN Y+K++KED  EIIHRRAQFLI+K+L+RAD         + + +++   R+  ++++ G++L+KL+KS    +   K G +  +V+  +R  +  F  
Subjt:  PNGYSKVDKEDPEEIIHRRAQFLINKVLERAD------SMGKPSYLRI---RIRRLKVRFGRRLKKLKKSAMASISTLKIG-VYKQVVSQIRNCKSLFGR

Query:  KQTNFANLPLLLS
           N +NLP L +
Subjt:  KQTNFANLPLLLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTGTTCTCATTAGCAGCAGGCCAAATGGTTACTCTAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTT
GGAACGAGCAGATTCCATGGGGAAACCTTCGTATCTGAGAATTAGAATTCGAAGGCTGAAGGTTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAAAGTGCAATGGCAA
GTATTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTGCCAATCTTCCTCTTTTG
TTATCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTGTTCTCATTAGCAGCAGGCCAAATGGTTACTCTAAGGTTGATAAAGAAGATCCAGAAGAGATAATTCATCGAAGAGCACAGTTTCTAATCAACAAAGTGTT
GGAACGAGCAGATTCCATGGGGAAACCTTCGTATCTGAGAATTAGAATTCGAAGGCTGAAGGTTAGATTTGGGAGAAGATTGAAGAAGCTAAAGAAAAGTGCAATGGCAA
GTATTTCAACTCTCAAGATTGGTGTTTACAAGCAAGTCGTTTCTCAGATCAGAAATTGCAAGTCTTTGTTTGGCCGAAAACAAACTAACTTTGCCAATCTTCCTCTTTTG
TTATCATCTTGA
Protein sequenceShow/hide protein sequence
MSFVLISSRPNGYSKVDKEDPEEIIHRRAQFLINKVLERADSMGKPSYLRIRIRRLKVRFGRRLKKLKKSAMASISTLKIGVYKQVVSQIRNCKSLFGRKQTNFANLPLL
LSS