CuGenDBv2

Gene ID	HG10016199
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	U3 small nucleolar RNA-associated protein 6 homolog
Genome location	Chr03:3468257..3471543
RNA-Seq Expression	HG10016199
Synteny	HG10016199
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0032040 - small-subunit processome (cellular component) GO:0034388 - Pwp2p-containing subcomplex of 90S preribosome (cellular component) GO:0005515 - protein binding (molecular function) GO:0030515 - snoRNA binding (molecular function)
InterPro domains	IPR003107 - HAT (Half-A-TPR) repeat IPR011990 - Tetratricopeptide-like helical domain superfamily IPR013949 - U3 small nucleolar RNA-associated protein 6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134769.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucumis sativus]

0.0e+00

91.86

Show/hide

Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDYEI LESLRRLRKKAVARELKKQG+KKM+KSISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVT+YKGDIDLWFRYLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE R DND S VET SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEM SKILQDIKRDFA+QP++WDWLARL C PENVQG SDIKEISRIEKAV+VYEEGLE VPSS IFSLYV+FL SII PVKGEQT GLSSHT+NITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEA+KLAERLCSGK+SNSVKLWVLRVSTEIKC+LKDSPSPSKDDLKSIFELTKEVL+  SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSS IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        AL TYGQ+V LWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

XP_008440018.1 PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Cucumis melo]

0.0e+00

91.4

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDYEI L+SLR LR+KAVARELKKQGNKKMR SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAV++YKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE R D+DGS VET SKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEM SKILQDIKRDFA+QP++WDWLARL+  PENVQG SDIKEISRIE+AV+VYEEGLE +PSS +FSLYVKFL SII PVKGEQT GLSSHTENITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEA++LA+RLCSGK+SNSVKLW LRVSTEIKC  KDSPSPSK+DLKSIFELTKEVL+  SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        ALTTYGQ+VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

XP_022142158.1 U3 small nucleolar RNA-associated protein 6 homolog [Momordica charantia]

0.0e+00

90.17

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAY+DYE HL+SLR LRKKAVARELKKQGNKKMRKSISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVT+YKGDIDLWFRYLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE +GSLVREN AAEEKQWREENKDLFMS+GE R++NDGSVVETESK++LDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEMHSKILQD+KRDF TQP++WDWLARL+C PENVQGMSD KEIS+IEKAVQVYEE LE +PSST+FSLYV+FLM+II PVKG+ TSGLSS+T NITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LL+VYEKALTLGHIT+DL CQYV FYL+LGRLDEARKLAERLCSGK SNSVKLWVLRVS EIKCILKDSPSPSKDD+KSIFELTK+VLRD SVSES SLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VL FFANQSYYFDKL+EISLLALAK GG+EDGFSLSS IVDFVLQKDGIQRTREVYKKFLGLPHPG AMY+TCIQLESNLASAGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        ALTTY QDVSLWQEY  ME+KIGSSETAAAIRWRARKTLKDATAL+TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

XP_023517938.1 U3 small nucleolar RNA-associated protein 6 homolog [Cucurbita pepo subsp. pepo]

0.0e+00

90.17

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AYIDYE HL+SLRRLRKKAV+RELKKQGNKKMRKS SDFA VKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAV++YKGDIDLWFRYLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH++NVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVREN AAE+KQWREENKDLFMS+GE R+DNDGSV ETESKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEE+HSKILQDIKRDF T+P++WDWLARLQ  P++VQGMSD KE SRIEKAVQVYEEGLE VPSS +FSLYV+FLM++I  VKGEQ+SGLSS T N TSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYV FYL+LG+LDEA KLAERLCSGK SNSVKLWVLRVSTEIK ILKDSPSPSKDDL SIFELTKE+LRD SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        LTVLKFFANQS+YFD+LVEISLLALAKSGG+EDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLA+Y+TCIQLESNLASAGDK+GLA+ARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        AL TYGQDVSLWQEYY MESK+GSSETAAAIRWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

XP_038883020.1 U3 small nucleolar RNA-associated protein 6 homolog [Benincasa hispida]

0.0e+00

94.33

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLE MVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLR LRKKAVARELKKQGNKKMRKSISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVT+YKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVREN+AAEEKQWREE+KDLFM MGEAR+DNDGSVVETESKNKLDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEM SKILQDIKRDF T+P++WDWLARLQ  PEN+QGMS IKEISRIEKAVQVYEEGLE VPSSTIFSLYVKFLM +I PVKGE+TSGLS+HTENITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSG++SNSVKLWVLRVSTEIKCI KDSPSPSKDDLK IFELTKEVL++ SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLAS GDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYG-QDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        ALTTYG  DVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATAL+TSSDL
Subjt:  ALTTYG-QDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJV9 Uncharacterized protein

0.0e+00

91.86

Show/hide

Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDD E+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDYEI LESLRRLRKKAVARELKKQG+KKM+KSISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVT+YKGDIDLWFRYLEFCRARKNG MKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE R DND S VET SK+KLDLFREKGSN+LETIY+GAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEM SKILQDIKRDFA+QP++WDWLARL C PENVQG SDIKEISRIEKAV+VYEEGLE VPSS IFSLYV+FL SII PVKGEQT GLSSHT+NITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEA+KLAERLCSGK+SNSVKLWVLRVSTEIKC+LKDSPSPSKDDLKSIFELTKEVL+  SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VLKFFANQSYYFDKLVEISL ALAKSGGNEDGFSLSS IVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        AL TYGQ+V LWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

A0A1S3B0R2 U3 small nucleolar RNA-associated protein 6 homolog

0.0e+00

91.4

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDYEI L+SLR LR+KAVARELKKQGNKKMR SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAV++YKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE R D+DGS VET SKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEM SKILQDIKRDFA+QP++WDWLARL+  PENVQG SDIKEISRIE+AV+VYEEGLE +PSS +FSLYVKFL SII PVKGEQT GLSSHTENITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEA++LA+RLCSGK+SNSVKLW LRVSTEIKC  KDSPSPSK+DLKSIFELTKEVL+  SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        ALTTYGQ+VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

A0A5D3CNA4 U3 small nucleolar RNA-associated protein 6-like protein

0.0e+00

91.4

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDDLE+RGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYL YIDYEI L+SLR LR+KAVARELKKQGNKKMR SISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAV++YKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN NVDAARSLMLSGLRVCPTSEDLW+EYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVRENI A EKQWREENKDLFMSMGE R D+DGS VET SKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEM SKILQDIKRDFA+QP++WDWLARL+  PENVQG SDIKEISRIE+AV+VYEEGLE +PSS +FSLYVKFL SII PVKGEQT GLSSHTENITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEA++LA+RLCSGK+SNSVKLW LRVSTEIKC  KDSPSPSK+DLKSIFELTKEVL+  SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSS IVDFVLQKDGIQ TREVYKKFLGLPHPGLAMYQTCIQLESNLA+AGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        ALTTYGQ+VSLWQEYYT+ESKIGSSETAAA+RWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

A0A6J1CMJ8 U3 small nucleolar RNA-associated protein 6 homolog

0.0e+00

90.17

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAY+DYE HL+SLR LRKKAVARELKKQGNKKMRKSISDFAGVKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAVT+YKGDIDLWFRYLEFCR ++NGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHN+NVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE +GSLVREN AAEEKQWREENKDLFMS+GE R++NDGSVVETESK++LDLFRE+GSNILETIYNGAIEALPSSFSLRKRVLEILEAMDL+H
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEEMHSKILQD+KRDF TQP++WDWLARL+C PENVQGMSD KEIS+IEKAVQVYEE LE +PSST+FSLYV+FLM+II PVKG+ TSGLSS+T NITSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LL+VYEKALTLGHIT+DL CQYV FYL+LGRLDEARKLAERLCSGK SNSVKLWVLRVS EIKCILKDSPSPSKDD+KSIFELTK+VLRD SVSES SLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        L VL FFANQSYYFDKL+EISLLALAK GG+EDGFSLSS IVDFVLQKDGIQRTREVYKKFLGLPHPG AMY+TCIQLESNLASAGDKDGLANARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        ALTTY QDVSLWQEY  ME+KIGSSETAAAIRWRARKTLKDATAL+TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

A0A6J1KQP1 U3 small nucleolar RNA-associated protein 6 homolog

0.0e+00

89.55

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQFRLEGM+DELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDY+AYIDYE HL+SLRRLRKKAV+RELKKQGNKKMRKS+SDFA VKRI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        LYIYRLAV++YKGDIDLWFRYLEFCRA+KNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDH++NVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
        KARKVALGE EGSLVREN AAE+KQWREENKDLFMS+GE R+DNDGSV ETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAH

Query:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR
        SEE+HSKILQDIKRDF T+P++WDWLARL+  P++VQGMSD K+ SRIEKAVQVYEEGLE VPSS +FSLYV+FLM++I  VKGEQ+SGLSS T N TSR
Subjt:  SEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSR

Query:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW
        LLMVYEKALT GHITDDLACQYV FY +LG+LDEARKLA+RLCSGK SNSVKLWVLRVSTEIK ILKDSPSPSKDDLKSIFELTKEVLRD SVSESGSLW
Subjt:  LLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLW

Query:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES
        LTVLKFFANQS+YFD+LVEISL ALAKSGG+EDGFSLSSAIVDF+LQKDGIQRTREVYKKFL LPHPGLA+Y+TCIQLESNLASAGDK+GLA+ARKL+ES
Subjt:  LTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYES

Query:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL
        AL TYGQDVSLWQEYY MESK+GSSETAAAIRWRARKTLKDATAL TSSDL
Subjt:  ALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

SwissProt top hits

e value

%identity

Alignment

O60188 U3 small nucleolar RNA-associated protein 6

7.0e-31

37.73

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MA+ VQ+ +E  V EL+DL ++ +F+R EI  I+K RR FE +L R      D+L+YI YEI+LE+LR  R K +        N   + +ISD+AG +++
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK
        L+++  A  K+ GD+ LW  Y+ + +  K    + K+    ++ HP    +W+ A   EF  N+NV AAR+LM   LR+   +  +W  Y R+EL+Y+ K
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKN-GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK

Query:  LKARKVALGEGEGSLVRENI
        L AR   L  G  S   ENI
Subjt:  LKARKVALGEGEGSLVRENI

Q02354 U3 small nucleolar RNA-associated protein 6

1.2e-27

30.98

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Query:  QFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYR
        ++ LE  + E+DDL ++GLF++ E++ I+K+R  FE+RL        DY+ YI+YE ++  LR  R K + +        K   S+SD++  +RI +IY+
Subjt:  QFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYR

Query:  LAVTKYKGDIDLWFRYLEFCRARKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLK
            K+  D+  W  YL + +AR N     ++  +  QL++ HP    +WI  A +E++ ++N  + R++  +GLR  P    LW EY++ EL ++ KL 
Subjt:  LAVTKYKGDIDLWFRYLEFCRARKN----GRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLK

Query:  ARKVALG---EGEGSLVRENIAAEEKQWREENKDLFM-SMGEARKDNDGSVVETE
         R+  +G   E E  L  +N     +   EE   L + S G++ KD    + E +
Subjt:  ARKVALG---EGEGSLVRENIAAEEKQWREENKDLFM-SMGEARKDNDGSVVETE

Q54WN5 U3 small nucleolar RNA-associated protein 6 homolog

1.0e-29

23.56

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Query:  DVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILY
        D V F ++ +++E   L   G+ S++E  +I+K+R   E ++      K D+L YI YE+ L+ L   R KA   E   +    +R +I           
Subjt:  DVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILY

Query:  IYRLAVTKYKGDIDLWFRYL--EFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        ++  A  K+  D  LW   L     RA K G  +     L    P+   +W  AA +EF+ N N+  AR+L+ +G++   T + LW  +  MELTY++ L
Subjt:  IYRLAVTKYKGDIDLWFRYL--EFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KAR----KVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E
         +        + E E   ++ N+ +  K  + E KD F++ G+        ++  +   +  L R     I + ++  AI+ ++   F  RK   +I  +
Subjt:  KAR----KVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIE-ALPSSFSLRKRVLEIL-E

Query:  AMDLAHSEE--------MHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQ
         +D+    E        +  +IL+ +  DF    + + +LA ++         S+   + R+  + ++  +GL  + S +    Y+ F+  II  +K ++
Subjt:  AMDLAHSEE--------MHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQ

Query:  TSGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIK----CILKDSPSPSKD--DLKSI
           +    ENIT  LL  Y+ ++    + +     Y+   LELG+ ++A K++E      + NS +LW  R++  IK      L D+ S + +  ++   
Subjt:  TSGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIK----CILKDSPSPSKD--DLKSI

Query:  FEL--------TKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMY
        FE+        T       S S S +L++   K+     + FDK                          D+    D  ++  +   +F          Y
Subjt:  FEL--------TKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMY

Query:  QTCIQLESNLASAGDKDGLANARKLYESALT---TYGQDVSLWQEYYTMESK-IGSSETAAAIRWRARKTLKDATALIT
        Q CI  E         D     R LYE  L+      +DV +W  Y   E K  G  E A  I  R +K+L D   L++
Subjt:  QTCIQLESNLASAGDKDGLANARKLYESALT---TYGQDVSLWQEYYTMESK-IGSSETAAAIRWRARKTLKDATALIT

Q8VCY6 U3 small nucleolar RNA-associated protein 6 homolog

8.5e-45

24.32

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY++ R   LK+D++ Y+ YEI+L  L + R+  +    KK           +++ V R+
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK
          ++  A  K+K D+ LW  Y+ FC+       + K+ + ++  H   P +WI AA WE +   + ++AR L L  LR  P    L+ EY RMEL +  K
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK

Query:  LKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA
        L+  K                       +E +   M MG+   D+   +++ E              +   IY  +I  +  +      +L I +  D A
Subjt:  LKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA

Query:  HSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQ----------VYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSG
          +++  +I  D++      P  WD++AR +   E+  G  + + +S+  KAV+          VYEE ++ +P+  ++  Y+ F +   +    ++TS 
Subjt:  HSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQ----------VYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSG

Query:  LSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLR
        +    + +  R ++ + KA  L  +++    Q++   L      EA ++AE   +  + +SV +W  ++      +L DS SP   D++  FE   E   
Subjt:  LSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLR

Query:  DVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKD
         +       LW++  ++  +     D         +A +G +    +L    +D+  +  G ++ R V+K         +  ++  +Q E       +  
Subjt:  DVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKD

Query:  GLANARKLYESALTTYG-QDVSLWQEYYTME--SKIGSSETAAAIRWRARKTLKDATA
         + N R+ YE AL  +G  D  LW +Y   E     G  E    I WRA K L+  +A
Subjt:  GLANARKLYESALTTYG-QDVSLWQEYYTME--SKIGSSETAAAIRWRARKTLKDATA

Q9NYH9 U3 small nucleolar RNA-associated protein 6 homolog

2.1e-43

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MA+++Q R+E  + EL+ LE+ GLFS  EI  I+K+    EY+++R    K+D++ Y+ YEI+L  L + R+  +    KK    ++  SI     V R+
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK
          +++ A  K+K D+ LW  Y+ FC+      R+ KV + ++  H   P +WI AA WE +   + ++AR L L  LR  P    L+ EY RMEL +  K
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRA-RKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNK

Query:  LKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA
        L+                    +EK+  E+      SM     D    +++ E              +   IY  ++  +  +      +L I +  D A
Subjt:  LKARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLA

Query:  HSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQ----------VYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSG
          +++  +I  D++      P  WD++AR +     ++  ++ +  ++  KAV+          VYEE ++ +P+  ++  Y+ F +        +  SG
Subjt:  HSEEMHSKILQDIKRDFATQPEFWDWLARLQCYPENVQGMSDIKEISRIEKAVQ----------VYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSG

Query:  LSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGK--YSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEV
                  R + V+ KA  L  +++   CQY    + L   +  R+  E   +G   + +S  +W L++      +L +S SP   D+  +FE   E 
Subjt:  LSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGK--YSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEV

Query:  LRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGD
           +       LW++  ++        D         LA  G   D  +L +  +D+  +  G ++ R V+K         +  ++  IQ E    S   
Subjt:  LRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGD

Query:  KDGLANARKLYESALTTYGQ-DVSLWQEYYTME--SKIGSSETAAAIRWRARKTLKDATA
           +AN R+ YE AL  +G  D  LW +Y   E    +G  E    I WRA K L+  +A
Subjt:  KDGLANARKLYESALTTYGQ-DVSLWQEYYTME--SKIGSSETAAAIRWRARKTLKDATA

Arabidopsis top hits

e value

%identity

Alignment

AT4G03430.1 pre-mRNA splicing factor-related

1.2e-04

20.97

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Query:  RMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSL---VRENIAAEEKQWRE
        R + +   L + +PK P  WI AA  E + +  + AAR  +  G   CP +ED+W+E  R     L   +  K  + +G   +   V+  + A + +   
Subjt:  RMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSL---VRENIAAEEKQWRE

Query:  ENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLAR
        ENK   +  G     +   +     K  ++L  E+ + IL    + A+E  P         LE+  A+    +     K+L   +     +P  W   A+
Subjt:  ENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLAR

Query:  LQCYPENVQGMSD------------IKEISR----IEKAVQVYE-EGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTE----NITSRLLMVYEK
        L+     +   +D            IK + R    I++   + E E  ERV S       +K  + I    +  + + ++   E            +Y  
Subjt:  LQCYPENVQGMSD------------IKEISR----IEKAVQVYE-EGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTE----NITSRLLMVYEK

Query:  ALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRD--VSVSESGSLWLTVLK
        AL++      +  +        G  +    L  +  +      V LW++    + K +  D P+             + +L++   ++  S  +WL   K
Subjt:  ALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRD--VSVSESGSLWLTVLK

Query:  F-FANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDK-DGLANARKLYESALT
          F N+     ++    LLA A+  G  +   + SAIV+  L    ++  R        L + GL  + T  +L   L    ++   L  ARK Y++ L 
Subjt:  F-FANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDK-DGLANARKLYESALT

Query:  TYGQDVSLWQEYYTMESKIGSSETAAAIRWRARK
             + LW     +E K+     A AI   ARK
Subjt:  TYGQDVSLWQEYYTMESKIGSSETAAAIRWRARK

AT4G28200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA processing; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT helix (InterPro:IPR003107), U3 small nucleolar RNA-associated protein 6 (InterPro:IPR013949); Has 492 Blast hits to 480 proteins in 206 species: Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).

1.4e-215

58.17

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Query:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI
        MADVVQ+RLE MVDELDDLE+R +F+R EIAEIVKQRRKFEYRLKRP PLK+D++AYIDYE+ L+ LR+LR+K+VAR  K    K+ +KS+SDFAGV RI
Subjt:  MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRI

Query:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL
        + IYRLA  +YKGDI+LWFRYLEFC+ +++GRMKK LAQ IRFHPKV GVWIYAA+WEFD N NV AAR+LML+GLRVC  SEDLWVEYLRMELT+LNKL
Subjt:  LYIYRLAVTKYKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKL

Query:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSM----GEARKDND-GSVVE--TESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEIL
        KARKVALGE +GSLVR+    E++QW++ENK+LFMS+    G  +++ND  S+VE   +   K+D  +EKGSN+L+TIY+GA+EA+PSSF LRKR LEIL
Subjt:  KARKVALGEGEGSLVRENIAAEEKQWREENKDLFMSM----GEARKDND-GSVVE--TESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEIL

Query:  EAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLAR--LQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLS
        EA DLAHS+EM + IL D+KRDF  +PE+W+WLAR  +     N  G+       +++KA+QV+EEGL+ V SS++F +Y+ FLM  I    G++   +S
Subjt:  EAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLAR--LQCYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLS

Query:  SHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDV
        S +  I S ++ VY+KA   G +T++LA +YV  YL+L +  EA+KLAE+LCS K++ S KLW+ RVS EI+  L ++ SPSK D +++FEL    LR V
Subjt:  SHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAERLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDV

Query:  SVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGL
         +SES SLWL    FFA+Q  Y DKLVE+S+L+  KS G++  FSL+S +V FVL+  G    R++YK+FL LP P L +Y+ CI++E+NL S GDKDGL
Subjt:  SVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDGIQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGL

Query:  ANARKLYESALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALI
        +NARKLY+SA+ +YGQDV LW+ YY++E+K+G+SETA  + WRARKTL ++   I
Subjt:  ANARKLYESALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALI

Sequences

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CDS sequence

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ATGGCGGACGTTGTGCAGTTCCGACTCGAAGGCATGGTCGACGAGCTCGATGACCTCGAGCAACGTGGCCTCTTCTCCCGGCGAGAGATTGCCGAGATTGTAAAGCAGCG
GCGTAAGTTCGAGTACCGTCTGAAGCGCCCTTGTCCACTTAAGCAGGACTATTTGGCCTATATCGATTATGAGATCCATTTGGAATCGCTTCGCCGTCTAAGGAAGAAGG
CAGTGGCTCGCGAGCTTAAGAAGCAAGGAAATAAAAAGATGAGAAAGTCTATCTCCGACTTCGCCGGCGTGAAAAGGATCTTGTACATTTATCGACTTGCGGTTACTAAG
TATAAGGGTGATATTGATCTCTGGTTTCGCTATCTCGAGTTTTGTAGAGCACGAAAGAACGGGAGAATGAAGAAGGTTCTGGCTCAGCTGATTAGGTTTCACCCAAAAGT
TCCAGGGGTTTGGATATATGCTGCTGCATGGGAGTTTGACCATAATAGCAATGTGGATGCAGCACGTTCTCTTATGTTAAGTGGTTTGAGAGTTTGCCCAACTTCAGAGG
ATCTTTGGGTAGAATATCTACGGATGGAACTTACTTATCTTAATAAGTTGAAGGCTCGAAAGGTTGCCCTTGGAGAGGGCGAGGGAAGTTTGGTCCGTGAAAATATAGCT
GCTGAGGAGAAACAGTGGAGAGAAGAAAATAAAGATTTGTTTATGTCAATGGGTGAAGCAAGGAAAGATAATGATGGATCAGTTGTTGAAACGGAGTCGAAGAATAAATT
GGATTTGTTTCGAGAGAAGGGTTCAAACATTTTAGAAACTATCTACAATGGAGCAATTGAAGCTCTACCTTCTAGTTTTAGTCTGAGAAAGCGTGTCTTAGAGATATTGG
AAGCAATGGATTTAGCTCATTCAGAAGAAATGCACTCGAAAATATTACAGGATATAAAAAGAGACTTCGCTACACAACCAGAATTTTGGGACTGGCTGGCTAGACTTCAA
TGTTATCCTGAAAATGTACAGGGAATGAGTGATATAAAGGAAATTTCTCGGATTGAAAAGGCTGTCCAGGTCTACGAGGAAGGCCTGGAGCGTGTGCCTTCATCTACAAT
TTTTAGCTTGTATGTGAAGTTTTTGATGAGCATTATTGCCCCTGTTAAGGGTGAACAAACGTCTGGGTTATCTAGTCATACCGAGAACATTACTTCACGACTCTTGATGG
TGTATGAAAAGGCTCTAACTTTAGGACACATTACAGATGATTTAGCATGCCAATATGTTTTGTTTTATCTGGAACTTGGGAGATTGGATGAAGCACGGAAGCTTGCAGAA
AGACTTTGCAGTGGAAAATATTCTAATTCTGTGAAGTTATGGGTATTGAGAGTCTCCACAGAAATAAAATGCATTTTGAAGGATTCTCCTTCTCCAAGTAAGGATGATCT
GAAGTCCATCTTTGAACTGACAAAAGAGGTTCTGAGAGATGTTTCAGTTTCAGAATCTGGGAGCTTGTGGCTAACGGTCCTCAAGTTTTTTGCCAATCAGAGTTATTATT
TTGACAAATTGGTGGAAATTTCTCTTTTAGCATTGGCTAAATCTGGTGGAAATGAGGATGGATTTTCACTCTCCTCAGCCATTGTTGATTTTGTTCTACAAAAAGATGGA
ATTCAGCGTACAAGAGAAGTGTATAAGAAATTTCTTGGATTACCCCATCCTGGGCTTGCTATGTACCAAACGTGTATTCAGCTGGAATCCAACCTTGCATCTGCAGGGGA
TAAAGATGGTCTTGCAAATGCTCGAAAGCTATATGAATCTGCACTTACAACTTATGGCCAAGATGTTAGCTTGTGGCAAGAGTACTACACAATGGAATCTAAGATAGGAT
CATCAGAAACAGCAGCTGCAATTCGTTGGCGTGCGAGGAAAACATTAAAAGACGCTACAGCCCTTATTACTAGCTCTGATTTGTGA

mRNA sequence

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Protein sequence

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MADVVQFRLEGMVDELDDLEQRGLFSRREIAEIVKQRRKFEYRLKRPCPLKQDYLAYIDYEIHLESLRRLRKKAVARELKKQGNKKMRKSISDFAGVKRILYIYRLAVTK
YKGDIDLWFRYLEFCRARKNGRMKKVLAQLIRFHPKVPGVWIYAAAWEFDHNSNVDAARSLMLSGLRVCPTSEDLWVEYLRMELTYLNKLKARKVALGEGEGSLVRENIA
AEEKQWREENKDLFMSMGEARKDNDGSVVETESKNKLDLFREKGSNILETIYNGAIEALPSSFSLRKRVLEILEAMDLAHSEEMHSKILQDIKRDFATQPEFWDWLARLQ
CYPENVQGMSDIKEISRIEKAVQVYEEGLERVPSSTIFSLYVKFLMSIIAPVKGEQTSGLSSHTENITSRLLMVYEKALTLGHITDDLACQYVLFYLELGRLDEARKLAE
RLCSGKYSNSVKLWVLRVSTEIKCILKDSPSPSKDDLKSIFELTKEVLRDVSVSESGSLWLTVLKFFANQSYYFDKLVEISLLALAKSGGNEDGFSLSSAIVDFVLQKDG
IQRTREVYKKFLGLPHPGLAMYQTCIQLESNLASAGDKDGLANARKLYESALTTYGQDVSLWQEYYTMESKIGSSETAAAIRWRARKTLKDATALITSSDL

HG10016199 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome