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HG10016215 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016215
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChaperonin-like RbcX protein
Genome locationChr03:3562240..3563125
RNA-Seq ExpressionHG10016215
SyntenyHG10016215
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0015977 - carbon fixation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0110102 - chloroplast ribulose bisphosphate carboxylase complex assembly (biological process)
GO:0044183 - protein folding chaperone (molecular function)
InterPro domainsIPR003435 - Chaperonin-like RbcX
IPR038052 - Chaperonin-like RbcX superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO76904.1 hypothetical protein CCACVL1_15363 [Corchorus capsularis]2.0e-0575Show/hide
Query:  MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETS
        +HNFF Y+AV+IV+AQLEMV +SNT+LMREYV ETS
Subjt:  MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETS
TrEMBL top hitse value%identityAlignment
A0A1R3I2U4 Uncharacterized protein9.9e-0675Show/hide
Query:  MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETS
        +HNFF Y+AV+IV+AQLEMV +SNT+LMREYV ETS
Subjt:  MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04330.1 Chaperonin-like RbcX protein9.1e-0450Show/hide
Query:  MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETSPSDTEK
        +H+FFTYVAVRIV+AQLE  +      +RE++   S SD +K
Subjt:  MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETSPSDTEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAATTTCTTCACATATGTTGCTGTTAGGATAGTGACTGCGCAGCTTGAGATGGTTAGTGAATCCAACACAAGACTTATGAGGGAATACGTGACGGAGACAAGTCC
ATCAGATACCGAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAATTTCTTCACATATGTTGCTGTTAGGATAGTGACTGCGCAGCTTGAGATGGTTAGTGAATCCAACACAAGACTTATGAGGGAATACGTGACGGAGACAAGTCC
ATCAGATACCGAGAAGTGA
Protein sequenceShow/hide protein sequence
MHNFFTYVAVRIVTAQLEMVSESNTRLMREYVTETSPSDTEK