; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016218 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016218
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionhomeobox protein knotted-1-like LET6
Genome locationChr03:3569323..3572331
RNA-Seq ExpressionHG10016218
SyntenyHG10016218
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0009934 - regulation of meristem structural organization (biological process)
GO:0010582 - floral meristem determinacy (biological process)
GO:0048440 - carpel development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005768 - endosome (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0009506 - plasmodesma (cellular component)
GO:0015630 - microtubule cytoskeleton (cellular component)
GO:0042803 - protein homodimerization activity (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
InterPro domainsIPR017970 - Homeobox, conserved site
IPR009057 - Homeobox-like domain superfamily
IPR008422 - Homeobox KN domain
IPR005541 - KNOX2
IPR005540 - KNOX1
IPR005539 - ELK domain
IPR001356 - Homeobox domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134981.2 homeobox protein knotted-1-like LET6 [Cucumis sativus]5.1e-14294.16Show/hide
Query:  DDQNNDE---GSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
        ++ NNDE   G+NSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASA TMS   N  GCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
Subjt:  DDQNNDE---GSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR

Query:  DAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
        DAMLFLQRIDSQFKALSISSSHL PACGEAFDRNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
Subjt:  DAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH

Query:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISP LL
Subjt:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

XP_008440041.1 PREDICTED: homeobox protein knotted-1-like LET6 [Cucumis melo]1.6e-14091.43Show/hide
Query:  MDDQNND--------EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQE
        MD+ NN+         G+NSCCEVKAKIMAHPHYHRLL AYVNCRKVGAPPEVVARLEEACASA TMS   N  GCIGEDPALDQFMEAYCEMLTKYEQE
Subjt:  MDDQNND--------EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQE

Query:  LSKPFRDAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL
        LSKPFRDAMLFLQRIDSQFKALSISSSHL PACGEAFDRNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL
Subjt:  LSKPFRDAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL

Query:  DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPLDISP LL
Subjt:  DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

XP_022132524.1 homeobox protein SBH1 [Momordica charantia]6.5e-13793.96Show/hide
Query:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQR
        NN   S+S  +VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLE+ACASAAT+SG SS CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQR
Subjt:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQR

Query:  IDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES
        ID QFKALSISSS   ACGEAFDRNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES
Subjt:  IDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES

Query:  QKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        QKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
Subjt:  QKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

XP_023003991.1 homeobox protein knotted-1-like LET6 [Cucurbita maxima]8.2e-13288.64Show/hide
Query:  DDQNNDEG----SNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNS-SGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
        ++ NND G    ++S CE+KAKIM HPHYHRLLAAYVNCRKVGAPPEVVARLE ACASA TMSG S +GCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
Subjt:  DDQNNDEG----SNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNS-SGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR

Query:  DAMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
        DAMLFL RI+ QFKALSISSS    CGEAF+RNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Subjt:  DAMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY

Query:  KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMDT+LGNPFPLDISPTLL
Subjt:  KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

XP_038883370.1 homeobox protein knotted-1-like LET6 [Benincasa hispida]4.2e-14494.53Show/hide
Query:  MDDQNND-----EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPF
        MD  NN+      G NSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVA LEEACASAA MSGNSSGCIGEDPALDQFMEAYCEML KYEQELSKPF
Subjt:  MDDQNND-----EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPF

Query:  RDAMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
        RDAMLFLQRIDSQFKALSISSS+ PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
Subjt:  RDAMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH

Query:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
Subjt:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

TrEMBL top hitse value%identityAlignment
A0A0A0KJU4 Uncharacterized protein2.5e-14294.16Show/hide
Query:  DDQNNDE---GSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
        ++ NNDE   G+NSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASA TMS   N  GCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
Subjt:  DDQNNDE---GSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR

Query:  DAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
        DAMLFLQRIDSQFKALSISSSHL PACGEAFDRNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
Subjt:  DAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH

Query:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISP LL
Subjt:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

A0A1S3B0X4 homeobox protein knotted-1-like LET67.9e-14191.43Show/hide
Query:  MDDQNND--------EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQE
        MD+ NN+         G+NSCCEVKAKIMAHPHYHRLL AYVNCRKVGAPPEVVARLEEACASA TMS   N  GCIGEDPALDQFMEAYCEMLTKYEQE
Subjt:  MDDQNND--------EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMS--GNSSGCIGEDPALDQFMEAYCEMLTKYEQE

Query:  LSKPFRDAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL
        LSKPFRDAMLFLQRIDSQFKALSISSSHL PACGEAFDRNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL
Subjt:  LSKPFRDAMLFLQRIDSQFKALSISSSHL-PACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL

Query:  DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD VLGNPFPLDISP LL
Subjt:  DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

A0A6J1BTA7 homeobox protein SBH13.1e-13793.96Show/hide
Query:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQR
        NN   S+S  +VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLE+ACASAAT+SG SS CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQR
Subjt:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQR

Query:  IDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES
        ID QFKALSISSS   ACGEAFDRNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES
Subjt:  IDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES

Query:  QKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        QKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
Subjt:  QKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

A0A6J1EG52 homeobox protein knotted-1-like LET61.1e-13188.6Show/hide
Query:  DQNNDEG----SNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNS-SGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRD
        + NND G    ++S CE+KAKIM HPHYHRLLAAYVNCRKVGAPP+VVARLE ACASA T+SG S +GCIGEDPALDQFMEAYCEMLTKYEQELSKPFRD
Subjt:  DQNNDEG----SNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNS-SGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRD

Query:  AMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
        AMLFL RI+ QFKALSISSS    CGEAF+RNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
Subjt:  AMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK

Query:  WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMDTVLGNPFPLDISPTLL
Subjt:  WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

A0A6J1KQV1 homeobox protein knotted-1-like LET64.0e-13288.64Show/hide
Query:  DDQNNDEG----SNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNS-SGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
        ++ NND G    ++S CE+KAKIM HPHYHRLLAAYVNCRKVGAPPEVVARLE ACASA TMSG S +GCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
Subjt:  DDQNNDEG----SNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNS-SGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR

Query:  DAMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
        DAMLFL RI+ QFKALSISSS    CGEAF+RNGSSEEEVDING+SIDPQAEDRELKGQLLRKYSG LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY
Subjt:  DAMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY

Query:  KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD  HPQYYMDT+LGNPFPLDISPTLL
Subjt:  KWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

SwissProt top hitse value%identityAlignment
O22299 Homeobox protein knotted-1-like LET62.3e-12177.42Show/hide
Query:  MDDQNN----DEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSS----GCIGEDPALDQFMEAYCEMLTKYEQELS
        MD+ NN    ++ ++S   +K+KIMAHPHYHRLL AY+NC+K+GAPPEVVARLEE CA++ATM  +SS    G IGEDPALDQFMEAYCEMLTKYEQELS
Subjt:  MDDQNN----DEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSS----GCIGEDPALDQFMEAYCEMLTKYEQELS

Query:  KPFRDAMLFLQRIDSQFKALSI--SSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD
        KPF++AM+FL RI+ QFKAL++  +SSH  A GEA DRNGSS+EEVD+N + IDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQL+D
Subjt:  KPFRDAMLFLQRIDSQFKALSI--SSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD

Query:  WWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        WW RH KWPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP YYMD VL N FP+D++P+LL
Subjt:  WWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

P46608 Homeobox protein SBH18.0e-12280.88Show/hide
Query:  DDQNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN----SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRD
        ++ N    S+S   VKAKIMAHPHYHRLLAAYVNC+KVGAPPEVVARLEEACASAATM+G      S CIGEDPALDQFMEAYCEMLTKYEQELSKP ++
Subjt:  DDQNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN----SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRD

Query:  AMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
        AMLFLQRI+ QFK L+ISSS   A  E  DRNGSSEE+VD++ N IDPQAEDR+LKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL+WW+RHYK
Subjt:  AMLFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK

Query:  WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL
        WPYPSESQKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD +HP YYMD VLGNPFP+D+S  +L
Subjt:  WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL

Q38874 Homeobox protein SHOOT MERISTEMLESS2.6e-11779.49Show/hide
Query:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFL
        N    S+S   VKAKIMAHPHYHRLLAAYVNC+KVGAPPEVVARLEEAC+SAA  + +   +GC+GEDP LDQFMEAYCEML KYEQELSKPF++AM+FL
Subjt:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFL

Query:  QRIDSQFKALSISS-SHLPACGE-AFDR--NGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW
        QR++ QFK+LS+SS S     GE A DR  NGSSEEEVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW
Subjt:  QRIDSQFKALSISS-SHLPACGE-AFDR--NGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW

Query:  PYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-QYYMDTVLGNPFPLD-ISPTLL
        PYPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA HP  Y+MD VLGNPFP+D IS T+L
Subjt:  PYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-QYYMDTVLGNPFPLD-ISPTLL

Q41853 Homeobox protein rough sheath 11.6e-7758.53Show/hide
Query:  VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSG-CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALS-
        +KAKI+AHP Y  LLAAY++C+KVGAPP+V+ RL    A AA +  +++G     DP LDQFMEAYC ML KY +EL++P  +AM FL+R+++Q   +S 
Subjt:  VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSG-CIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALS-

Query:  ---ISSSHLPACGEAFDRNGSSEEEVDINGN-----SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ
            SS+ L       +  GSSE+++D NG       IDP+AED+ELK QLL+KYSGYL SL+QEF KK+KKGKLPKEARQ+LL WW  HYKWPYPSE++
Subjt:  ---ISSSHLPACGEAFDRNGSSEEEVDINGN-----SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ

Query:  KLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLD
        K+ALA+STGLDQKQINNWFINQRKRHWKPSEDM FV+M+  HPQ      +  PF  D
Subjt:  KLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLD

Q9M6D9 Homeobox protein SHOOT MERISTEMLESS2.0e-11278.54Show/hide
Query:  VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALS
        VKAKIMAHPHYHRLL AYVNC+KVGAPPEV ARLEE C+SAA  + +   +G +GEDP LDQFMEAYCEML KYEQELSKPF++AM+FLQ ++ QFK+LS
Subjt:  VKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFKALS

Query:  ISSSHLPACGEAF---DRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALA
        +SS      GEA    + NGSSEEEVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE QKLALA
Subjt:  ISSSHLPACGEAF---DRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALA

Query:  QSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-QYYMDTVLGNPFPLD-ISPTLL
        +STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA HP  Y+M  VLGNPFP+D IS T+L
Subjt:  QSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-QYYMDTVLGNPFPLD-ISPTLL

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 61.6e-6449.61Show/hide
Query:  QNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLF
        + ND+ + S   +KAKI  HP Y RLL AY++C+KVGAPPE+   LEE    +         S C G DP LD+FME YC++L KY+ +L++PF +A  F
Subjt:  QNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLF

Query:  LQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK
        L +I+ Q + L        A G + D   SS+EE+    + +      + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ LLDWW+ HYK
Subjt:  LQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK

Query:  WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD
        WPYP+E  K+ALA +TGLDQKQINNWFINQRKRHWKPSE+M F +MD +   ++ +
Subjt:  WPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD

AT1G23380.2 KNOTTED1-like homeobox gene 65.0e-6349.22Show/hide
Query:  QNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRK--VGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAM
        + ND+ + S   +KAKI  HP Y RLL AY++C+K  VGAPPE+   LEE    +         S C G DP LD+FME YC++L KY+ +L++PF +A 
Subjt:  QNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRK--VGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAM

Query:  LFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH
         FL +I+ Q + L        A G + D   SS+EE+    + +      + EDR+LK +LLRK+   + +LK EF KK+KKGKLP+EARQ LLDWW+ H
Subjt:  LFLQRIDSQFKALSISSSHLPACGEAFDRNGSSEEEVDINGNSI----DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRH

Query:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD
        YKWPYP+E  K+ALA +TGLDQKQINNWFINQRKRHWKPSE+M F +MD +   ++ +
Subjt:  YKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD

AT1G62360.1 KNOX/ELK homeobox transcription factor1.9e-11879.49Show/hide
Query:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFL
        N    S+S   VKAKIMAHPHYHRLLAAYVNC+KVGAPPEVVARLEEAC+SAA  + +   +GC+GEDP LDQFMEAYCEML KYEQELSKPF++AM+FL
Subjt:  NNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGN--SSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFL

Query:  QRIDSQFKALSISS-SHLPACGE-AFDR--NGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW
        QR++ QFK+LS+SS S     GE A DR  NGSSEEEVD+N   +DPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW
Subjt:  QRIDSQFKALSISS-SHLPACGE-AFDR--NGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKW

Query:  PYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-QYYMDTVLGNPFPLD-ISPTLL
        PYPSE QKLALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA HP  Y+MD VLGNPFP+D IS T+L
Subjt:  PYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHP-QYYMDTVLGNPFPLD-ISPTLL

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 26.6e-6348.43Show/hide
Query:  EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSS--GCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI
        E + S   +K+KI +HP Y RLL  Y++C+KVGAP E+   LEE          + +   C G DP LD+FME YC++L KY+ +L++PF +A  F+ +I
Subjt:  EGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSS--GCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRI

Query:  DSQFKALSISSSHLPACGEAFDRNG--SSEEEV----DINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP
        + Q + L       PA   A   +G  SS+EE+    DI  +    ++ DR+LK QLLRK+  ++ SLK EF KK+KKGKLP+EARQ LLDWW+ H KWP
Subjt:  DSQFKALSISSSHLPACGEAFDRNG--SSEEEV----DINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWP

Query:  YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD
        YP+E  K++LA+ TGLDQKQINNWFINQRKRHWKPSE+M F +MD ++  ++ +
Subjt:  YPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMD

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana7.2e-7857.84Show/hide
Query:  DQNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLE------EACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR
        + NN++  +    +KAKI+AHPHY  LL AY++C+K+GAPP+VV R+       EA    +T S ++S     DP LDQFMEAYC+ML KY +EL++P +
Subjt:  DQNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLE------EACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR

Query:  DAMLFLQRIDSQFKALSISSSHLPACGEA-FDRNGSSEEEVDINGN------SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL
        +AM F++RI+SQ   L  S  H+    +   D  GSS+EE + N         IDP+AEDRELK  LL+KYSGYL SLKQE  KK+KKGKLPKEARQ+LL
Subjt:  DAMLFLQRIDSQFKALSISSSHLPACGEA-FDRNGSSEEEVDINGN------SIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLL

Query:  DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPQY---YMD
         WW  HYKWPYPSES+K+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQF+VMD   HP +   YMD
Subjt:  DWWSRHYKWPYPSESQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA-AHPQY---YMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCAAAACAACGACGAGGGTAGTAATTCTTGTTGTGAAGTGAAGGCTAAAATTATGGCTCATCCTCACTACCACCGTCTTCTCGCTGCCTATGTCAATTGTCG
AAAGGTGGGAGCGCCGCCGGAAGTGGTGGCTAGGCTTGAAGAAGCATGTGCAAGTGCAGCAACAATGAGTGGTAATAGTAGTGGGTGTATTGGGGAAGATCCAGCCCTCG
ATCAGTTCATGGAAGCTTACTGTGAAATGCTCACTAAATATGAACAAGAACTTTCTAAACCCTTTAGAGATGCCATGCTTTTTCTTCAACGAATTGACTCCCAATTCAAA
GCCCTCTCTATCTCTTCCTCTCACCTCCCTGCTTGTGGCGAAGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATCAATGGGAACTCGATCGACCCCCAGGC
GGAAGACCGTGAACTGAAAGGTCAGCTGCTGCGCAAATACAGTGGATACTTAGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCTAAGGAAG
CCAGACAACAACTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCTGAATCACAGAAGCTAGCTTTAGCTCAATCAACTGGGTTAGATCAAAAGCAAATC
AACAACTGGTTCATCAATCAAAGAAAAAGACACTGGAAACCATCAGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGACACTGTCCTGGG
GAATCCTTTCCCCTTGGATATCTCTCCTACTCTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCAAAACAACGACGAGGGTAGTAATTCTTGTTGTGAAGTGAAGGCTAAAATTATGGCTCATCCTCACTACCACCGTCTTCTCGCTGCCTATGTCAATTGTCG
AAAGGTGGGAGCGCCGCCGGAAGTGGTGGCTAGGCTTGAAGAAGCATGTGCAAGTGCAGCAACAATGAGTGGTAATAGTAGTGGGTGTATTGGGGAAGATCCAGCCCTCG
ATCAGTTCATGGAAGCTTACTGTGAAATGCTCACTAAATATGAACAAGAACTTTCTAAACCCTTTAGAGATGCCATGCTTTTTCTTCAACGAATTGACTCCCAATTCAAA
GCCCTCTCTATCTCTTCCTCTCACCTCCCTGCTTGTGGCGAAGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATCAATGGGAACTCGATCGACCCCCAGGC
GGAAGACCGTGAACTGAAAGGTCAGCTGCTGCGCAAATACAGTGGATACTTAGGCAGTCTGAAGCAAGAATTCATGAAGAAAAGGAAGAAAGGGAAGCTACCTAAGGAAG
CCAGACAACAACTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCTGAATCACAGAAGCTAGCTTTAGCTCAATCAACTGGGTTAGATCAAAAGCAAATC
AACAACTGGTTCATCAATCAAAGAAAAAGACACTGGAAACCATCAGAAGATATGCAATTTGTGGTGATGGATGCTGCTCATCCACAGTATTACATGGACACTGTCCTGGG
GAATCCTTTCCCCTTGGATATCTCTCCTACTCTACTTTGA
Protein sequenceShow/hide protein sequence
MDDQNNDEGSNSCCEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAATMSGNSSGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIDSQFK
ALSISSSHLPACGEAFDRNGSSEEEVDINGNSIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAQSTGLDQKQI
NNWFINQRKRHWKPSEDMQFVVMDAAHPQYYMDTVLGNPFPLDISPTLL