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HG10016231 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016231
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein RALF-like 7
Genome locationChr03:3686917..3687153
RNA-Seq ExpressionHG10016231
SyntenyHG10016231
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058710.1 protein RALF-like 7 [Cucumis melo var. makuwa]1.5e-0957.58Show/hide
Query:  KTLTIFISFMIVCSLMVNPTNTT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS
        K L I I+ ++VCSLMV+PTN   S+ YGAI KD +  C +GHC+T  DPAN Y RGCE E  CRS
Subjt:  KTLTIFISFMIVCSLMVNPTNTT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS

KAE8648219.1 hypothetical protein Csa_018424, partial [Cucumis sativus]1.4e-1263.08Show/hide
Query:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I  ++ ++VCSLM NPTN TS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

KAE8648222.1 hypothetical protein Csa_023891, partial [Cucumis sativus]1.4e-1263.08Show/hide
Query:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I  ++ ++VCSLM NPTN TS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

KAG6603811.1 hypothetical protein SDJN03_04420, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0852.17Show/hide
Query:  MAASIKTLTIFISFMIVCSLMVNPTNTTSIDYGAIAKD-GEVCHNGHCETQGDPANKYTRGCEAEERCR
        MAAS K   I I  M+V S +V P    S+ YGA+  D G  C +G CET GDPAN Y RGCEA++ CR
Subjt:  MAASIKTLTIFISFMIVCSLMVNPTNTTSIDYGAIAKD-GEVCHNGHCETQGDPANKYTRGCEAEERCR

KGN49664.1 hypothetical protein Csa_018501 [Cucumis sativus]1.4e-1263.08Show/hide
Query:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I  ++ ++VCSLM NPTN TS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

TrEMBL top hitse value%identityAlignment
A0A0A0KJT5 Uncharacterized protein8.5e-1158.46Show/hide
Query:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I  I+ ++ CSL+ NPTN TS+ YG I K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

A0A0A0KLD0 Uncharacterized protein7.0e-1363.08Show/hide
Query:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I  ++ ++VCSLM NPTN TS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTI-FISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

A0A200RBE7 Lipid-A-disaccharide synthase5.9e-0436.84Show/hide
Query:  ASIKTLTIFISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRSDEIVNEPAT
        A  + L + I+  +VCSL++  T  T++ YG +  DG  C    C    D  N Y RGCE   RCRSD ++ +  T
Subjt:  ASIKTLTIFISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRSDEIVNEPAT

A0A5A7UUI8 Protein RALF-like 77.2e-1057.58Show/hide
Query:  KTLTIFISFMIVCSLMVNPTNTT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS
        K L I I+ ++VCSLMV+PTN   S+ YGAI KD +  C +GHC+T  DPAN Y RGCE E  CRS
Subjt:  KTLTIFISFMIVCSLMVNPTNTT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCTCCATCAAAACATTGACCATTTTTATTAGTTTTATGATCGTTTGCTCATTGATGGTAAACCCAACAAACACAACCTCTATTGATTATGGCGCTATCGCTAA
GGATGGAGAAGTATGCCATAACGGTCACTGCGAAACACAAGGAGATCCAGCCAACAAGTATACCAGAGGATGTGAGGCCGAAGAACGATGTAGATCTGACGAAATTGTTA
ATGAACCCGCTACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCTCCATCAAAACATTGACCATTTTTATTAGTTTTATGATCGTTTGCTCATTGATGGTAAACCCAACAAACACAACCTCTATTGATTATGGCGCTATCGCTAA
GGATGGAGAAGTATGCCATAACGGTCACTGCGAAACACAAGGAGATCCAGCCAACAAGTATACCAGAGGATGTGAGGCCGAAGAACGATGTAGATCTGACGAAATTGTTA
ATGAACCCGCTACATAA
Protein sequenceShow/hide protein sequence
MAASIKTLTIFISFMIVCSLMVNPTNTTSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRSDEIVNEPAT