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HG10016232 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016232
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein RALF-like 7
Genome locationChr03:3690271..3690495
RNA-Seq ExpressionHG10016232
SyntenyHG10016232
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058710.1 protein RALF-like 7 [Cucumis melo var. makuwa]1.6e-0857.81Show/hide
Query:  LTIFITMMIVSSLMVNPTNAT-SIDYGAIAKDGEV-CHEGHCETQGDPANKYTRGCEAEERCRT
        L I I M++V SLMV+PTNA  S+ YGAI KD +  C +GHC+T  DPAN Y RGCE E  CR+
Subjt:  LTIFITMMIVSSLMVNPTNAT-SIDYGAIAKDGEV-CHEGHCETQGDPANKYTRGCEAEERCRT
KAE8648219.1 hypothetical protein Csa_018424, partial [Cucumis sativus]6.8e-1261.67Show/hide
Query:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
        + + M++V SLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CR+
Subjt:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
KAE8648222.1 hypothetical protein Csa_023891, partial [Cucumis sativus]6.8e-1261.67Show/hide
Query:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
        + + M++V SLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CR+
Subjt:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
KAG6603811.1 hypothetical protein SDJN03_04420, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0955.07Show/hide
Query:  MAASIQTLTIFITMMIVSSLMVNPTNATSIDYGAIAKD-GEVCHEGHCETQGDPANKYTRGCEAEERCR
        MAAS +   I I MM+VSS +V P  A S+ YGA+  D G  C +G CET GDPAN Y RGCEA++ CR
Subjt:  MAASIQTLTIFITMMIVSSLMVNPTNATSIDYGAIAKD-GEVCHEGHCETQGDPANKYTRGCEAEERCR
KGN49664.1 hypothetical protein Csa_018501 [Cucumis sativus]6.8e-1261.67Show/hide
Query:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
        + + M++V SLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CR+
Subjt:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
TrEMBL top hitse value%identityAlignment
A0A0A0KJT5 Uncharacterized protein5.2e-1056.67Show/hide
Query:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
        + I M++  SL+ NPTNATS+ YG I K    C +G CE  GDPAN YTRGCE EE CR+
Subjt:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
A0A0A0KLD0 Uncharacterized protein3.3e-1261.67Show/hide
Query:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
        + + M++V SLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CR+
Subjt:  IFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRT
A0A5A7UUI8 Protein RALF-like 77.5e-0957.81Show/hide
Query:  LTIFITMMIVSSLMVNPTNAT-SIDYGAIAKDGEV-CHEGHCETQGDPANKYTRGCEAEERCRT
        L I I M++V SLMV+PTNA  S+ YGAI KD +  C +GHC+T  DPAN Y RGCE E  CR+
Subjt:  LTIFITMMIVSSLMVNPTNAT-SIDYGAIAKDGEV-CHEGHCETQGDPANKYTRGCEAEERCRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCTCCATCCAAACATTGACCATTTTTATAACTATGATGATTGTTTCCTCATTGATGGTAAACCCAACAAACGCAACTTCTATTGATTATGGCGCTATCGCTAA
GGATGGAGAAGTATGCCATGAGGGTCACTGCGAAACACAAGGAGATCCAGCCAACAAGTATACCAGAGGATGTGAGGCCGAAGAACGGTGTAGAACTGACGAAATTATTG
GATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCTCCATCCAAACATTGACCATTTTTATAACTATGATGATTGTTTCCTCATTGATGGTAAACCCAACAAACGCAACTTCTATTGATTATGGCGCTATCGCTAA
GGATGGAGAAGTATGCCATGAGGGTCACTGCGAAACACAAGGAGATCCAGCCAACAAGTATACCAGAGGATGTGAGGCCGAAGAACGGTGTAGAACTGACGAAATTATTG
GATGA
Protein sequenceShow/hide protein sequence
MAASIQTLTIFITMMIVSSLMVNPTNATSIDYGAIAKDGEVCHEGHCETQGDPANKYTRGCEAEERCRTDEIIG