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HG10016233 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016233
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein RALF-like 7
Genome locationChr03:3692453..3692689
RNA-Seq ExpressionHG10016233
SyntenyHG10016233
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058710.1 protein RALF-like 7 [Cucumis melo var. makuwa]3.9e-1060.61Show/hide
Query:  KTLTIFIIMMIVCSLMVNPTNAT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS
        K L I I M++VCSLMV+PTNA  S+ YGAI KD +  C +GHC+T  DPAN Y RGCE E  CRS
Subjt:  KTLTIFIIMMIVCSLMVNPTNAT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS

KAE8648219.1 hypothetical protein Csa_018424, partial [Cucumis sativus]2.2e-1367.69Show/hide
Query:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I ++ MI VCSLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

KAE8648222.1 hypothetical protein Csa_023891, partial [Cucumis sativus]2.2e-1367.69Show/hide
Query:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I ++ MI VCSLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

KAG6603811.1 hypothetical protein SDJN03_04420, partial [Cucurbita argyrosperma subsp. sororia]8.7e-1056.52Show/hide
Query:  MAASIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKD-GEVCHNGHCETQGDPANKYTRGCEAEERCR
        MAAS K   I IIMM+V S +V P  A S+ YGA+  D G  C +G CET GDPAN Y RGCEA++ CR
Subjt:  MAASIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKD-GEVCHNGHCETQGDPANKYTRGCEAEERCR

KGN49664.1 hypothetical protein Csa_018501 [Cucumis sativus]2.2e-1367.69Show/hide
Query:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I ++ MI VCSLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

TrEMBL top hitse value%identityAlignment
A0A0A0KJT5 Uncharacterized protein7.7e-1263.08Show/hide
Query:  KTLTIFIIMMIV-CSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I +I MI+ CSL+ NPTNATS+ YG I K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTIFIIMMIV-CSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

A0A0A0KLD0 Uncharacterized protein1.1e-1367.69Show/hide
Query:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS
        KTL I ++ MI VCSLM NPTNATS+DYGAI K    C +G CE  GDPAN YTRGCE EE CRS
Subjt:  KTLTIFIIMMI-VCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRS

A0A200RBE7 Lipid-A-disaccharide synthase3.5e-0438.16Show/hide
Query:  ASIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRSDEIVNEPAT
        A  + L + I + +VCSL++  T AT++ YG +  DG  C    C    D  N Y RGCE   RCRSD ++ +  T
Subjt:  ASIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRSDEIVNEPAT

A0A5A7UUI8 Protein RALF-like 71.9e-1060.61Show/hide
Query:  KTLTIFIIMMIVCSLMVNPTNAT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS
        K L I I M++VCSLMV+PTNA  S+ YGAI KD +  C +GHC+T  DPAN Y RGCE E  CRS
Subjt:  KTLTIFIIMMIVCSLMVNPTNAT-SIDYGAIAKDGEV-CHNGHCETQGDPANKYTRGCEAEERCRS

A0A5C7HF32 Uncharacterized protein3.5e-0444.3Show/hide
Query:  SIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKD-GEVCHNGHCE--TQGDPANKYTRGCEAEERCR---SDEIVNEP
        S K +   I M++ C L V   +A  I YGAI +D    C   H E  T+G P N Y RGCEAEERCR    DE+  +P
Subjt:  SIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKD-GEVCHNGHCE--TQGDPANKYTRGCEAEERCR---SDEIVNEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCTCCATCAAAACATTGACCATTTTTATAATTATGATGATCGTTTGCTCATTGATGGTAAACCCAACAAACGCAACCTCTATTGATTATGGCGCTATCGCTAA
AGATGGAGAAGTATGCCATAACGGTCACTGCGAAACACAAGGAGATCCAGCCAACAAGTATACCAGAGGATGTGAGGCCGAAGAACGATGTAGATCTGACGAAATTGTTA
ATGAGCCCGCTACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCTCCATCAAAACATTGACCATTTTTATAATTATGATGATCGTTTGCTCATTGATGGTAAACCCAACAAACGCAACCTCTATTGATTATGGCGCTATCGCTAA
AGATGGAGAAGTATGCCATAACGGTCACTGCGAAACACAAGGAGATCCAGCCAACAAGTATACCAGAGGATGTGAGGCCGAAGAACGATGTAGATCTGACGAAATTGTTA
ATGAGCCCGCTACATAA
Protein sequenceShow/hide protein sequence
MAASIKTLTIFIIMMIVCSLMVNPTNATSIDYGAIAKDGEVCHNGHCETQGDPANKYTRGCEAEERCRSDEIVNEPAT