; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016241 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016241
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:3728982..3729672
RNA-Seq ExpressionHG10016241
SyntenyHG10016241
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008440070.1 PREDICTED: uncharacterized protein LOC103484658 [Cucumis melo]4.0e-2650.31Show/hide
Query:  ALSSLTNVIHFPNSFS-NSSSNNLN-PTSLH---------PPTTVPVKRR------------GSLFVKCQSGAESKKDKLLETINQLYKSIKKKDIVEFS
        ALSSL N IHFP SFS +S+S NLN   S H         PP  +  KRR            GS  +K Q   +   +  LETIN++YKSIKKKD++E +
Subjt:  ALSSLTNVIHFPNSFS-NSSSNNLN-PTSLH---------PPTTVPVKRR------------GSLFVKCQSGAESKKDKLLETINQLYKSIKKKDIVEFS

Query:  HVIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
        +VIA++ P I  SIPF+  +LK   LVSN +KGLQ+S+VF V PT KDG+MVGIKWKVG
Subjt:  HVIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

XP_011658120.1 uncharacterized protein LOC105435947 isoform X1 [Cucumis sativus]6.0e-2246.2Show/hide
Query:  MALSSLTNVIHFPNS-FSNSSSNNLN-PTSLH--------PPTTVPVKRR---GSLFVKCQSGA--------ESKKDKLLETINQLYKSIKKKDIVEFSH
        MA SSL N I  P S  S  +S NLN   S H        PP  +  KRR    SL ++C  G          S  +  LETIN++YKSIKKKD+ + ++
Subjt:  MALSSLTNVIHFPNS-FSNSSSNNLN-PTSLH--------PPTTVPVKRR---GSLFVKCQSGA--------ESKKDKLLETINQLYKSIKKKDIVEFSH

Query:  VIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
        VIA++ P I  SIPF+   LK   L S+ +KGLQ+++VFS++PTTKDG+MVGI WKVG
Subjt:  VIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

XP_011658121.1 uncharacterized protein LOC105435947 isoform X2 [Cucumis sativus]8.7e-2145.51Show/hide
Query:  MALSSLTNVIHFPNS-FSNSSSNNLN-PTSLH--------PPTTVPVKRR---GSLFVKCQSGA--------ESKKDKLLETINQLYKSIKKKDIVEFSH
        MA SSL N I  P S  S  +S NLN   S H        PP  +  KRR    SL ++C  G          S  +  LETIN++YKSIKKKD+ + ++
Subjt:  MALSSLTNVIHFPNS-FSNSSSNNLN-PTSLH--------PPTTVPVKRR---GSLFVKCQSGA--------ESKKDKLLETINQLYKSIKKKDIVEFSH

Query:  VIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWK
        VIA++ P I  SIPF+   LK   L S+ +KGLQ+++VFS++PTTKDG+MVGI WK
Subjt:  VIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWK

XP_038883269.1 uncharacterized protein LOC120074268 isoform X1 [Benincasa hispida]1.6e-3862.84Show/hide
Query:  MALSSLTNVIHFPNSFSNSSSNNLNPTSLHP------PTTVPVKRRGSLFVKCQSGAESKK-----DKLLETINQLYKSIKKKDIVEFSHVIANRHPKIF
        MALSSL N IHFPNSFS S+SNNLN  S+H       P  +  KRR SL VKC    E +      D  LETIN+LYK IKKKDI + S+VIANR P IF
Subjt:  MALSSLTNVIHFPNSFSNSSSNNLNPTSLHP------PTTVPVKRRGSLFVKCQSGAESKK-----DKLLETINQLYKSIKKKDIVEFSHVIANRHPKIF

Query:  QSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
         SIPF+  NLK W L+SN +KGLQDS+VFSV+PTTKDG+MVGIKWKVG
Subjt:  QSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

XP_038883270.1 uncharacterized protein LOC120074268 isoform X2 [Benincasa hispida]5.8e-2552.7Show/hide
Query:  MALSSLTNVIHFPNSFSNSSSNNLNPTSLHP------PTTVPVKRRGSLFVKCQSGAESKK-----DKLLETINQLYKSIKKKDIVEFSHVIANRHPKIF
        MALSSL N IHFPNSFS S+SNNLN  S+H       P  +  KRR SL VKC    E +      D  LETIN+LYK IKKKDI + S+VIANR P IF
Subjt:  MALSSLTNVIHFPNSFSNSSSNNLNPTSLHP------PTTVPVKRRGSLFVKCQSGAESKK-----DKLLETINQLYKSIKKKDIVEFSHVIANRHPKIF

Query:  QSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
         SIPF+  NL                      PTTKDG+MVGIKWKVG
Subjt:  QSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

TrEMBL top hitse value%identityAlignment
A0A0A0KL37 Uncharacterized protein2.9e-2246.2Show/hide
Query:  MALSSLTNVIHFPNS-FSNSSSNNLN-PTSLH--------PPTTVPVKRR---GSLFVKCQSGA--------ESKKDKLLETINQLYKSIKKKDIVEFSH
        MA SSL N I  P S  S  +S NLN   S H        PP  +  KRR    SL ++C  G          S  +  LETIN++YKSIKKKD+ + ++
Subjt:  MALSSLTNVIHFPNS-FSNSSSNNLN-PTSLH--------PPTTVPVKRR---GSLFVKCQSGA--------ESKKDKLLETINQLYKSIKKKDIVEFSH

Query:  VIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
        VIA++ P I  SIPF+   LK   L S+ +KGLQ+++VFS++PTTKDG+MVGI WKVG
Subjt:  VIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

A0A1S3B083 uncharacterized protein LOC1034846582.0e-2650.31Show/hide
Query:  ALSSLTNVIHFPNSFS-NSSSNNLN-PTSLH---------PPTTVPVKRR------------GSLFVKCQSGAESKKDKLLETINQLYKSIKKKDIVEFS
        ALSSL N IHFP SFS +S+S NLN   S H         PP  +  KRR            GS  +K Q   +   +  LETIN++YKSIKKKD++E +
Subjt:  ALSSLTNVIHFPNSFS-NSSSNNLN-PTSLH---------PPTTVPVKRR------------GSLFVKCQSGAESKKDKLLETINQLYKSIKKKDIVEFS

Query:  HVIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
        +VIA++ P I  SIPF+  +LK   LVSN +KGLQ+S+VF V PT KDG+MVGIKWKVG
Subjt:  HVIANRHPKIFQSIPFIPPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

A0A6J1EFQ1 uncharacterized protein LOC111433705 isoform X12.3e-1141.55Show/hide
Query:  MALSSLTNVIHFPNSFSNSSSNN---LNPTSLHPPTTVP-VKRRGSLFVKCQSG-AESKKDKLLETINQLYKSIKKKDIVEFSHVIANRHPKIFQSIPFI
        +A SS  + +HFP S SNS+  N   L  T+   P+  P  KRR SL VKC  G AE  K    ETI++LYK IK + I                  PF 
Subjt:  MALSSLTNVIHFPNSFSNSSSNN---LNPTSLHPPTTVP-VKRRGSLFVKCQSG-AESKKDKLLETINQLYKSIKKKDIVEFSHVIANRHPKIFQSIPFI

Query:  PPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
        P + K    +SNF+  LQ  I+F V+P T DG MVG+KW+VG
Subjt:  PPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

A0A6J1ELN6 uncharacterized protein LOC111433705 isoform X22.3e-1141.55Show/hide
Query:  MALSSLTNVIHFPNSFSNSSSNN---LNPTSLHPPTTVP-VKRRGSLFVKCQSG-AESKKDKLLETINQLYKSIKKKDIVEFSHVIANRHPKIFQSIPFI
        +A SS  + +HFP S SNS+  N   L  T+   P+  P  KRR SL VKC  G AE  K    ETI++LYK IK + I                  PF 
Subjt:  MALSSLTNVIHFPNSFSNSSSNN---LNPTSLHPPTTVP-VKRRGSLFVKCQSG-AESKKDKLLETINQLYKSIKKKDIVEFSHVIANRHPKIFQSIPFI

Query:  PPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
        P + K    +SNF+  LQ  I+F V+P T DG MVG+KW+VG
Subjt:  PPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

A0A6J1KRN9 uncharacterized protein LOC111497026 isoform X36.7e-1136.94Show/hide
Query:  MALSSLTNVIHFPNSF--SNSSSNNLN---PTSLHPPTTVPVKRRGSLF--VKCQSGAES----------KKDKLLETINQLYKSIKKKDIVEFSHVIAN
        MA SS TN+IHFP S   SNSSSN+ N     SL+     P   +  L+  VKC    +S            DK L+ +++LY+ IK K++ +   VIA+
Subjt:  MALSSLTNVIHFPNSF--SNSSSNNLN---PTSLHPPTTVPVKRRGSLF--VKCQSGAES----------KKDKLLETINQLYKSIKKKDIVEFSHVIAN

Query:  RHPKIFQSIPFI---PPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG
          P  + SIP I      L      S+  K   +S+ F+ +PTTK+G+M G+KWK+G
Subjt:  RHPKIFQSIPFI---PPNLKTWILVSNFLKGLQDSIVFSVEPTTKDGTMVGIKWKVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTTTCTTCATTAACAAATGTCATCCATTTCCCCAACTCATTCTCAAACTCAAGCTCCAACAACCTCAATCCCACCTCTCTTCACCCTCCGACGACAGTCCCGGT
CAAGCGTCGAGGCTCATTGTTCGTTAAATGTCAAAGTGGTGCGGAGTCGAAAAAAGATAAGCTTCTTGAAACAATTAACCAACTTTACAAAAGCATAAAGAAGAAAGACA
TTGTTGAATTTTCTCATGTAATAGCTAATCGACATCCAAAGATCTTCCAGTCCATCCCTTTTATTCCACCCAATTTGAAAACATGGATTTTGGTGTCCAATTTCTTAAAG
GGATTACAAGATAGCATAGTATTTTCAGTGGAGCCAACAACAAAAGATGGAACGATGGTGGGCATTAAATGGAAAGTAGGTACATACTCCAAAAACTCGAACCATATCTT
TAATTTGTTTGAATTTTACCACAACAATTTTTTTTTAGTAAATCCCACATTAATATTAATATTAATATTAGTACACTCCATCCTATTTTTAAAAGCATGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTTTCTTCATTAACAAATGTCATCCATTTCCCCAACTCATTCTCAAACTCAAGCTCCAACAACCTCAATCCCACCTCTCTTCACCCTCCGACGACAGTCCCGGT
CAAGCGTCGAGGCTCATTGTTCGTTAAATGTCAAAGTGGTGCGGAGTCGAAAAAAGATAAGCTTCTTGAAACAATTAACCAACTTTACAAAAGCATAAAGAAGAAAGACA
TTGTTGAATTTTCTCATGTAATAGCTAATCGACATCCAAAGATCTTCCAGTCCATCCCTTTTATTCCACCCAATTTGAAAACATGGATTTTGGTGTCCAATTTCTTAAAG
GGATTACAAGATAGCATAGTATTTTCAGTGGAGCCAACAACAAAAGATGGAACGATGGTGGGCATTAAATGGAAAGTAGGTACATACTCCAAAAACTCGAACCATATCTT
TAATTTGTTTGAATTTTACCACAACAATTTTTTTTTAGTAAATCCCACATTAATATTAATATTAATATTAGTACACTCCATCCTATTTTTAAAAGCATGCTAA
Protein sequenceShow/hide protein sequence
MALSSLTNVIHFPNSFSNSSSNNLNPTSLHPPTTVPVKRRGSLFVKCQSGAESKKDKLLETINQLYKSIKKKDIVEFSHVIANRHPKIFQSIPFIPPNLKTWILVSNFLK
GLQDSIVFSVEPTTKDGTMVGIKWKVGTYSKNSNHIFNLFEFYHNNFFLVNPTLILILILVHSILFLKAC