; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016253 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016253
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTPD1 protein homolog 1-like
Genome locationChr03:3808028..3809008
RNA-Seq ExpressionHG10016253
SyntenyHG10016253
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
GO:0009408 - response to heat (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12989.1 TPD1 protein-like protein 1-like isoform X2 [Cucumis melo var. makuwa]1.2e-6587.94Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGSECSK+D+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS

XP_004134986.1 TPD1 protein homolog 1 isoform X2 [Cucumis sativus]1.2e-6587.32Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGS C+KDD+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCSS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS

XP_011658115.1 TPD1 protein homolog 1 isoform X3 [Cucumis sativus]1.2e-6587.32Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGS C+KDD+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCSS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS

XP_038880860.1 TPD1 protein homolog 1-like isoform X1 [Benincasa hispida]2.3e-7283.04Show/hide
Query:  CLAVPSVFSFLLFSFFIEIGTDFIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNS
        C+ +P  F+F+  +FF      F +L   EFKLVHLRVVQ AAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTY+VQILNS
Subjt:  CLAVPSVFSFLLFSFFIEIGTDFIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNS

Query:  CASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS
        CASDCSISNIH+KC WFSSARLVNPRIFRRV+YDDCLV++GQALGPGQTLSFQYANTFPYPLSV+SVTCSS
Subjt:  CASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS

XP_038880861.1 TPD1 protein homolog 1-like isoform X2 [Benincasa hispida]1.2e-7090.6Show/hide
Query:  FIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARL
        F++    EFKLVHLRVVQ AAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTY+VQILNSCASDCSISNIH+KC WFSSARL
Subjt:  FIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARL

Query:  VNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS
        VNPRIFRRV+YDDCLV++GQALGPGQTLSFQYANTFPYPLSV+SVTCSS
Subjt:  VNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS

TrEMBL top hitse value%identityAlignment
A0A0A0KL27 Uncharacterized protein5.8e-6687.32Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGS C+KDD+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCSS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS

A0A1S3AZV4 TPD1 protein homolog 1-like isoform X11.3e-6587.94Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGSECSK D+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS

A0A1S3B0B6 TPD1 protein homolog 1-like isoform X21.3e-6587.94Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGSECSK D+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS

A0A5D3CRM1 TPD1 protein-like protein 1-like isoform X25.8e-6687.94Show/hide
Query:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR
        EFKLVHLRV+Q AARE RNGIS MSLQSSNSGKEMNRIGSECSK+D+IIFQG  TPLP GIPTY+VQILNSCASDCSISNIHVKC WFSSARLVNPRIF+
Subjt:  EFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFR

Query:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS
        RV+YDDCLVNDG+ALGPG+TLSFQYANTFPYPLSV+S TCS
Subjt:  RVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCS

A0A6J1GDB1 TPD1 protein homolog 1-like4.3e-6174.07Show/hide
Query:  FLLFSFFIEIGTDFIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISN
        FL FS F+             FKLV L VVQ AAREK +GIS MSLQSS +G+ MNR+GSECSKD+V++FQGQT PLPDGIP+++VQILNSC+S CSISN
Subjt:  FLLFSFFIEIGTDFIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISN

Query:  IHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS
        IH+KC WFSSARLVNPRIFRRV YDDCL+NDG+ALGPGQTLSFQYANTFPYPLSV+SVTCSS
Subjt:  IHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058352.7e-0740.28Show/hide
Query:  YMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYD--DCLVNDGQALGPGQTLSFQYANTFPYPL
        + V+++N C   C I N+ +KC+ F  + LV+P   R ++    +C+VNDG  L P QTLSF Y+NT  + L
Subjt:  YMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYD--DCLVNDGQALGPGQTLSFQYANTFPYPL

Q1G3T1 TPD1 protein homolog 11.3e-4665.12Show/hide
Query:  VAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVND
        V+  E R  +S   L S + G   NRIG +CSKDD+++FQG T PLP G+P+Y V+I NSC SDC+I+ IHV C WFSS RLVNPR+FRR+ YDDCLVND
Subjt:  VAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVND

Query:  GQALGPGQTLSFQYANTFPYPLSVASVTC
        GQ LGPGQ+LSFQYAN+F YPLSVASV+C
Subjt:  GQALGPGQTLSFQYANTFPYPLSVASVTC

Q2QR54 TPD1 protein homolog 1A2.2e-3047.24Show/hide
Query:  ISGMSLQSSNSGKEMNRIGSECS-KDDVIIFQGQTTPLPDGIPTYMVQILNSCA------SDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQ
        +SG        G    R+   C+  DD+ I+QG+ TPLP G+P Y V ++N CA       +C+I+ IHV+C WFSS  LV+PR+FRR+ +DDCL+NDG+
Subjt:  ISGMSLQSSNSGKEMNRIGSECS-KDDVIIFQGQTTPLPDGIPTYMVQILNSCA------SDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQ

Query:  ALGPGQTLSFQYANTFPYPLSVASVTC
         L  G+T+SF+Y N+FPY LSV+  TC
Subjt:  ALGPGQTLSFQYANTFPYPLSVASVTC

Q6TLJ2 Protein TAPETUM DETERMINANT 13.0e-3556.91Show/hide
Query:  MSLQSSNSGK-----EMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPG
        M L S  +GK     E  RIG +C   D+++ Q  T P+P+GIP YMV+I N C S C IS IH+ C WFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G
Subjt:  MSLQSSNSGK-----EMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPG

Query:  QTLSFQYANTFPYPLSVASVTCS
         TLSF YANTFPY LSVA VTC+
Subjt:  QTLSFQYANTFPYPLSVASVTCS

Q8S6P9 TPD1 protein homolog 1B2.4e-2445.22Show/hide
Query:  SSNSGKE-MNRIGSE-CSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQY
        S N G+  M R+  + CS+ +V+++Q     LP GIPTY V+I+N C + C++ ++H+ C  F+SA LV+P  F+R+ ++DCLV  G  LGP + +SFQY
Subjt:  SSNSGKE-MNRIGSE-CSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQY

Query:  ANTFPYPLSVASVTC
        +N+F YPL+VA+V C
Subjt:  ANTFPYPLSVASVTC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein1.9e-0840.28Show/hide
Query:  YMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYD--DCLVNDGQALGPGQTLSFQYANTFPYPL
        + V+++N C   C I N+ +KC+ F  + LV+P   R ++    +C+VNDG  L P QTLSF Y+NT  + L
Subjt:  YMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYD--DCLVNDGQALGPGQTLSFQYANTFPYPL

AT1G32583.1 FUNCTIONS IN: molecular_function unknown9.2e-4865.12Show/hide
Query:  VAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVND
        V+  E R  +S   L S + G   NRIG +CSKDD+++FQG T PLP G+P+Y V+I NSC SDC+I+ IHV C WFSS RLVNPR+FRR+ YDDCLVND
Subjt:  VAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVND

Query:  GQALGPGQTLSFQYANTFPYPLSVASVTC
        GQ LGPGQ+LSFQYAN+F YPLSVASV+C
Subjt:  GQALGPGQTLSFQYANTFPYPLSVASVTC

AT4G24972.1 tapetum determinant 12.1e-3656.91Show/hide
Query:  MSLQSSNSGK-----EMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPG
        M L S  +GK     E  RIG +C   D+++ Q  T P+P+GIP YMV+I N C S C IS IH+ C WFSSA+L+NPR+F+R+ YDDCLVN+G+ L  G
Subjt:  MSLQSSNSGK-----EMNRIGSECSKDDVIIFQGQTTPLPDGIPTYMVQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPG

Query:  QTLSFQYANTFPYPLSVASVTCS
         TLSF YANTFPY LSVA VTC+
Subjt:  QTLSFQYANTFPYPLSVASVTCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACATCTCCACCTCACTCTGCTTTTACAACTCTACCACTCCATGTTTAGCTGTACCCTCTGTTTTCTCATTCCTTCTCTTTTCTTTCTTCATCGAAATCGGCAC
CGACTTCATAGTACTTAGTCAACCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCAGGTAGCTGCAAGAGAGAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTT
CTAATAGTGGTAAAGAGATGAATCGCATTGGTTCAGAATGTTCAAAAGACGATGTCATTATATTTCAAGGCCAAACAACTCCACTTCCGGATGGGATTCCAACATATATG
GTTCAGATCTTGAATTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTCAAATGTGAGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAGGCGAGT
CACTTATGATGACTGCCTTGTCAACGATGGCCAAGCTCTTGGTCCTGGTCAAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTAGCTTCTGTAA
CTTGTTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGACATCTCCACCTCACTCTGCTTTTACAACTCTACCACTCCATGTTTAGCTGTACCCTCTGTTTTCTCATTCCTTCTCTTTTCTTTCTTCATCGAAATCGGCAC
CGACTTCATAGTACTTAGTCAACCAGAATTCAAGTTGGTTCATTTGAGAGTTGTTCAGGTAGCTGCAAGAGAGAAAAGAAATGGGATTTCTGGGATGTCGCTTCAATCTT
CTAATAGTGGTAAAGAGATGAATCGCATTGGTTCAGAATGTTCAAAAGACGATGTCATTATATTTCAAGGCCAAACAACTCCACTTCCGGATGGGATTCCAACATATATG
GTTCAGATCTTGAATTCATGTGCTTCAGACTGCAGCATCTCCAACATTCACGTCAAATGTGAGTGGTTCAGCTCAGCCAGATTGGTGAATCCAAGAATTTTTAGGCGAGT
CACTTATGATGACTGCCTTGTCAACGATGGCCAAGCTCTTGGTCCTGGTCAAACTCTGTCTTTTCAATATGCTAATACTTTCCCTTACCCTCTTTCTGTAGCTTCTGTAA
CTTGTTCTTCTTAA
Protein sequenceShow/hide protein sequence
MADISTSLCFYNSTTPCLAVPSVFSFLLFSFFIEIGTDFIVLSQPEFKLVHLRVVQVAAREKRNGISGMSLQSSNSGKEMNRIGSECSKDDVIIFQGQTTPLPDGIPTYM
VQILNSCASDCSISNIHVKCEWFSSARLVNPRIFRRVTYDDCLVNDGQALGPGQTLSFQYANTFPYPLSVASVTCSS