CuGenDBv2

Gene ID	HG10016287
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Glycoside hydrolase, family 1
Genome location	Chr03:4012893..4013336
RNA-Seq Expression	HG10016287
Synteny	HG10016287
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011658091.1 uncharacterized protein LOC101212199 [Cucumis sativus]

2.1e-65

94.52

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL
        MSRIDDLPYSRPPKQKALHQKASTASH+QVKDP+DRIKGSFPAQTAQKASKRSLKNEPSV FQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESF+L
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL

Query:  GTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQ
        G ELK VEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLA SN+PQ
Subjt:  GTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQ

XP_016899190.1 PREDICTED: uncharacterized protein LOC103485204 [Cucumis melo]

1.8e-64

93.24

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLPYSRPPKQKALHQKASTASHLQ+KDP++RIKGSFPAQTAQKASKRSLKNEPS+ FQQPERSNSDSLPD SSASGNEYRALRRKYLLLEEESFT
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL
        LG ELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLA SN+P L
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL

XP_022950616.1 uncharacterized protein LOC111453661 [Cucurbita moschata]

3.7e-62

92.47

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLP+SRPPKQKA HQKASTASHLQ KDPNDRIKGSFPAQTAQK+SKRSLKNEPSVA QQPERSNSDSLPD SSASGNEYR LRRKYLLLEEESF+
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP
        LGTELKEVEDEVK LEEEKLGLLDELLVLEGLIDRSELQLA SN+P
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP

XP_023545100.1 uncharacterized protein LOC111804503 [Cucurbita pepo subsp. pepo]

4.9e-62

92.47

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLPYSRPPKQKA HQKASTASHLQ KDPNDRIKGSFPAQT QK+SKRSLKNEPSVA QQPERSNSDSLPD SSASGNEYR LRRKYLLLEEESF+
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP
        LGTELKEVEDEVK LEEEKLGLLDELLVLEGLIDRSELQLA SN+P
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP

XP_038881521.1 uncharacterized protein LOC120073026 [Benincasa hispida]

7.3e-66

94.56

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL
        MSRIDDLPYS+PPKQKALHQKAS ASHLQ KDPNDRIKGSF AQTAQKASKRSLKNEPS+ FQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL

Query:  GTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL
        GTELKEVEDEVKTLEEEKL LLDELLVLEGLIDRSELQLAQSN+PQL
Subjt:  GTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMU4 Uncharacterized protein

1.0e-65

94.52

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL
        MSRIDDLPYSRPPKQKALHQKASTASH+QVKDP+DRIKGSFPAQTAQKASKRSLKNEPSV FQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESF+L
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTL

Query:  GTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQ
        G ELK VEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLA SN+PQ
Subjt:  GTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQ

A0A1S4DU11 uncharacterized protein LOC103485204

8.7e-65

93.24

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLPYSRPPKQKALHQKASTASHLQ+KDP++RIKGSFPAQTAQKASKRSLKNEPS+ FQQPERSNSDSLPD SSASGNEYRALRRKYLLLEEESFT
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL
        LG ELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLA SN+P L
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL

A0A5D3CLN1 Uncharacterized protein

8.7e-65

93.24

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLPYSRPPKQKALHQKASTASHLQ+KDP++RIKGSFPAQTAQKASKRSLKNEPS+ FQQPERSNSDSLPD SSASGNEYRALRRKYLLLEEESFT
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL
        LG ELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLA SN+P L
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL

A0A6J1GFB4 uncharacterized protein LOC111453661

1.8e-62

92.47

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLP+SRPPKQKA HQKASTASHLQ KDPNDRIKGSFPAQTAQK+SKRSLKNEPSVA QQPERSNSDSLPD SSASGNEYR LRRKYLLLEEESF+
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP
        LGTELKEVEDEVK LEEEKLGLLDELLVLEGLIDRSELQLA SN+P
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP

A0A6J1ITW9 uncharacterized protein LOC111478385

9.0e-62

91.78

Show/hide

Query:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT
        MSRIDDLPYSRPPKQKA H KASTASHLQ KDPNDRIKGSFPAQT QK+SKRSLKNEPSVA QQPERSNSDSLPD SSASGNEYR LRRKYLLLEEESF+
Subjt:  MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPD-SSASGNEYRALRRKYLLLEEESFT

Query:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP
        LGTELKEVEDEVK LEEEKLGLLDELLVLEGLIDRSELQLA SN+P
Subjt:  LGTELKEVEDEVKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G51500.1 unknown protein

9.3e-19

52.68

Show/hide

Query:  STASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERS-NSDSLPDSSASGNEYRALRRKYLLLEEESFTLGTELKEVEDEVKTLEEEKLGL
        S A  +++  P   +    P +  +K S RS  N+      Q E S NSDS P     GNEYRALRRKYLLLEE+SF L  ELKE EDEVK LE+EKL L
Subjt:  STASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERS-NSDSLPDSSASGNEYRALRRKYLLLEEESFTLGTELKEVEDEVKTLEEEKLGL

Query:  LDELLVLEGLID
        LD+L+V+EGL+D
Subjt:  LDELLVLEGLID

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTCGGATTGACGATTTACCATATTCTAGGCCACCAAAACAGAAAGCTTTGCACCAAAAGGCTTCCACAGCATCTCATTTACAAGTGAAAGATCCCAACGATCGAAT
TAAGGGGTCTTTTCCAGCACAAACAGCACAGAAGGCCTCCAAAAGAAGTTTAAAGAATGAACCATCTGTAGCATTTCAGCAGCCCGAAAGGTCGAATTCGGATTCTTTGC
CTGATTCATCTGCATCTGGGAATGAGTACCGTGCCTTAAGAAGAAAATATTTACTCCTGGAGGAAGAGAGCTTTACTCTGGGAACAGAACTGAAAGAAGTTGAAGATGAA
GTGAAGACCCTAGAAGAAGAAAAGCTTGGTCTCTTGGATGAACTTCTTGTTTTAGAAGGACTAATCGATCGTTCAGAATTGCAGCTTGCCCAGTCAAATGTACCACAACT
TTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSRIDDLPYSRPPKQKALHQKASTASHLQVKDPNDRIKGSFPAQTAQKASKRSLKNEPSVAFQQPERSNSDSLPDSSASGNEYRALRRKYLLLEEESFTLGTELKEVEDE
VKTLEEEKLGLLDELLVLEGLIDRSELQLAQSNVPQL

HG10016287 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome