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HG10016310 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016310
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionendochitinase-like
Genome locationChr03:4133452..4133835
RNA-Seq ExpressionHG10016310
SyntenyHG10016310
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006032 - chitin catabolic process (biological process)
GO:0006952 - defense response (biological process)
GO:0016998 - cell wall macromolecule catabolic process (biological process)
GO:0004568 - chitinase activity (molecular function)
GO:0008061 - chitin binding (molecular function)
InterPro domainsIPR000726 - Glycoside hydrolase, family 19, catalytic
IPR023346 - Lysozyme-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603866.1 hypothetical protein SDJN03_04475, partial [Cucurbita argyrosperma subsp. sororia]9.1e-5784.3Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG ALRLDLLNNP+LVA DAV+AFKTAIWFWM PQGNKPS HDVI  RWQPSNADR AGR+PGYG++TNIINGGVECGG + NAV SRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDILG+ YGDNLDCNNQSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

XP_022949793.1 endochitinase-like [Cucurbita moschata]6.3e-5885.95Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG ALRLDLLNNP+LVATDAV+AFKTAIWFWM PQGNKPS HDVI  RWQPSNADR AGR+PGYG++TNIINGGVECGG + NAV SRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDILG+SYGDNLDCNNQSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

XP_022977304.1 endochitinase-like [Cucurbita maxima]1.8e-5785.95Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG ALRLDLLNNP+LVATDAV+AFKTAIWFWM PQGNKPS HDVI  RWQP+NADR AGR+PGYG+ITNIINGGVECGG + NAV SRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDILGI YGDNLDCNNQSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

XP_023544981.1 endochitinase-like [Cucurbita pepo subsp. pepo]4.1e-5785.12Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG ALRLDLLNNP LVATDAV+AFKTAIWFWM PQGNKPS HDVI  RWQPSNADR AGR+PGYG++TNIINGGVECGG + NAV SRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDILG+ YGDNLDCNNQSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

XP_038882616.1 LOW QUALITY PROTEIN: endochitinase A-like [Benincasa hispida]5.9e-5685.12Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG AL LDLL+NPDLVATDAVVA KTAIWFWM PQGNKPSCHDVI  RWQPSN+DR  GRF GYG+ITNIINGGVECGG +TNAVTSRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCD+LGISYGDNLDC +QSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

TrEMBL top hitse value%identityAlignment
A0A0A0KJL2 Chitin-binding type-1 domain-containing protein7.3e-5276.19Show/hide
Query:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI
        M +  NYNYGQAG AL LDLLNNPDLVATDA VAFKTAIWFWM PQGNKPS HDVI  RWQPS++DR +GR+PGYG+ITNIINGGVECGG   +AV  RI
Subjt:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI

Query:  GLYKRYCDILGISYGDNLDCNNQSSF
          YKRYCD+LG+SYGDNLDC +Q SF
Subjt:  GLYKRYCDILGISYGDNLDCNNQSSF

A0A6J1GD36 endochitinase-like3.0e-5885.95Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG ALRLDLLNNP+LVATDAV+AFKTAIWFWM PQGNKPS HDVI  RWQPSNADR AGR+PGYG++TNIINGGVECGG + NAV SRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDILG+SYGDNLDCNNQSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

A0A6J1IJI8 endochitinase-like1.2e-5175.4Show/hide
Query:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI
        + L  NYNYG AG AL L+LLNNPDLVATD VVAFKTAIWFWM PQGNKPSCHDVI  RWQPS AD  AGR PGYG+ITNIINGG+ECG  + + V  RI
Subjt:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI

Query:  GLYKRYCDILGISYGDNLDCNNQSSF
        G YKRYCD+LGI YG+NLDCNNQ SF
Subjt:  GLYKRYCDILGISYGDNLDCNNQSSF

A0A6J1IR09 endochitinase-like8.8e-5885.95Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG ALRLDLLNNP+LVATDAV+AFKTAIWFWM PQGNKPS HDVI  RWQP+NADR AGR+PGYG+ITNIINGGVECGG + NAV SRIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDILGI YGDNLDCNNQSSF
Subjt:  YCDILGISYGDNLDCNNQSSF

O80404 Chitinase1.2e-5175.4Show/hide
Query:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI
        + L  NYNYG AG AL L+LLNNPDLVATD VVAFKTAIWFWM PQGNKPSCHDVI  RWQPS AD  AGR PGYG+ITNIINGG+ECG  + + V  RI
Subjt:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI

Query:  GLYKRYCDILGISYGDNLDCNNQSSF
        G YKRYCD+LGI YG+NLDCNNQ SF
Subjt:  GLYKRYCDILGISYGDNLDCNNQSSF

SwissProt top hitse value%identityAlignment
P21226 Endochitinase A21.6e-4869.42Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQ G A+ +DLLNNPDLVATD V++FKTA+WFWM PQ  KPSCHDVI   W PS+ADR AGR PGYG +TNIINGG+ECG    + V  RIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDI GI YGDNLDC +Q  F
Subjt:  YCDILGISYGDNLDCNNQSSF

P24091 Endochitinase B5.5e-4969.42Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYG  G A+ +DLLNNPDLVATD V++FK+A+WFWM PQ  KPSCHDVII RWQPS+ADR A R PG+G+ITNIINGG+ECG  + + V  RIG Y+R
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YC ILG+S GDNLDC NQ SF
Subjt:  YCDILGISYGDNLDCNNQSSF

P51613 Basic endochitinase5.5e-4971.07Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG+A+ +DL+NNPDLVATDAV++FKTA WFWM PQ  KPSCH+VI   W PS ADR AGR PG+G+ITNIINGGVECG      V  RIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCDIL +SYG+NLDCNNQ  F
Subjt:  YCDILGISYGDNLDCNNQSSF

P86473 Endochitinase7.2e-4968.25Show/hide
Query:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI
        + +  NYNYG AG+AL +DLLNNPDLVATD  ++FKTA+WFWM PQ  KPSCHDVI  RW PS ADR AGR PG+G+ITNIINGG+ECG  S + V  RI
Subjt:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI

Query:  GLYKRYCDILGISYGDNLDCNNQSSF
        G YKRYC I GI  GDNLDC NQ SF
Subjt:  GLYKRYCDILGISYGDNLDCNNQSSF

P93680 Endochitinase5.5e-4969.42Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYG AG A+  DL+NNPD VATD V++FKTA+WFWM PQ  KPSCH+VI  RW PS ADR AGR PGYG+ITNIINGG+ECG    + V  RIG YKR
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        YCD+LG+SYG NLDC NQ SF
Subjt:  YCDILGISYGDNLDCNNQSSF

Arabidopsis top hitse value%identityAlignment
AT1G02360.1 Chitinase family protein9.4e-3652.07Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYG AG AL  D L NP+ V+ ++V+AF+TA+WFWM PQ  KPSCHDV+I +++P+ AD  A R  G+G+ TNIINGG+ECG      V  RIG ++R
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        Y  +  ++ G NLDC NQ  +
Subjt:  YCDILGISYGDNLDCNNQSSF

AT1G05850.1 Chitinase family protein1.6e-2237.8Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIP-QGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYK
        N+NYG AGEAL+ DLLN+P+ +  +A +AF+ AIW WM P +  +PS HD+ +  W+P+  D ++ R P +G   N++ G   CG  S + + + I  Y 
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIP-QGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYK

Query:  RYCDILGISY-----GDNLDCNNQSSF
         + D++GI        D L C  Q  F
Subjt:  RYCDILGISY-----GDNLDCNNQSSF

AT3G12500.1 basic chitinase1.4e-4766.14Show/hide
Query:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI
        M L  NYNYG  G A+ +DLLNNPDLVA DAV+AFK AIWFWM  Q  KPSCH VI  +WQPS+ADR AGR PGYG+ITNIINGG+ECG      V  RI
Subjt:  MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRI

Query:  GLYKRYCDILGISYGDNLDCNNQSSFV
        G Y+RYC+I G++ G NLDC NQ SFV
Subjt:  GLYKRYCDILGISYGDNLDCNNQSSFV

AT3G16920.1 chitinase-like protein 27.0e-2337.5Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMI-PQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVEC-GGLSTNAVTSRIGLY
        NYNYGQ GEAL++DLL++P+ +  +A +AF+ AIW WM  P+ + PS HDV + +W+P+  D  A R PG+G   N++ G   C  G   + + + +  Y
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMI-PQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVEC-GGLSTNAVTSRIGLY

Query:  KRYCDILGISY-----GDNLDCNNQSSF
          Y D++G+        + L C +Q  F
Subjt:  KRYCDILGISY-----GDNLDCNNQSSF

AT4G01700.1 Chitinase family protein4.1e-3956.2Show/hide
Query:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR
        NYNYGQAG AL  D L NP+LVA ++V+AFKTA+WFWM  Q  KPSCH+V+++R++P+ ADR A R  GYG++TNIINGG+ECG      VT R+G ++R
Subjt:  NYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKR

Query:  YCDILGISYGDNLDCNNQSSF
        Y  +  ++ G NLDC NQ  F
Subjt:  YCDILGISYGDNLDCNNQSSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTAATTAGCAACTACAACTACGGACAAGCAGGTGAAGCATTGAGATTAGATTTACTAAACAATCCAGATTTGGTAGCCACAGATGCAGTGGTAGCATTCAAGAC
AGCCATTTGGTTTTGGATGATACCACAAGGAAACAAACCATCATGTCATGACGTTATTATCAGCCGATGGCAACCGTCAAATGCTGATAGAGTTGCTGGAAGATTTCCTG
GTTACGGTATCATTACCAACATCATTAATGGTGGAGTTGAATGTGGAGGTCTTTCTACTAATGCAGTGACTAGTAGAATTGGATTGTACAAAAGGTATTGTGACATATTA
GGTATTAGCTATGGAGACAACTTGGACTGTAACAATCAGAGCTCTTTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTAATTAGCAACTACAACTACGGACAAGCAGGTGAAGCATTGAGATTAGATTTACTAAACAATCCAGATTTGGTAGCCACAGATGCAGTGGTAGCATTCAAGAC
AGCCATTTGGTTTTGGATGATACCACAAGGAAACAAACCATCATGTCATGACGTTATTATCAGCCGATGGCAACCGTCAAATGCTGATAGAGTTGCTGGAAGATTTCCTG
GTTACGGTATCATTACCAACATCATTAATGGTGGAGTTGAATGTGGAGGTCTTTCTACTAATGCAGTGACTAGTAGAATTGGATTGTACAAAAGGTATTGTGACATATTA
GGTATTAGCTATGGAGACAACTTGGACTGTAACAATCAGAGCTCTTTTGTCTGA
Protein sequenceShow/hide protein sequence
MDLISNYNYGQAGEALRLDLLNNPDLVATDAVVAFKTAIWFWMIPQGNKPSCHDVIISRWQPSNADRVAGRFPGYGIITNIINGGVECGGLSTNAVTSRIGLYKRYCDIL
GISYGDNLDCNNQSSFV