CuGenDBv2

Gene ID	HG10016325
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	DUF1990 domain-containing protein
Genome location	Chr03:4208314..4212195
RNA-Seq Expression	HG10016325
Synteny	HG10016325
Gene Ontology terms	NA
InterPro domains	IPR018960 - Domain of unknown function DUF1990

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7034054.1 UPF0548 protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-65

91.85

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Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPYVILRQKYFA+QSTNAVKKYLTA HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

XP_004134836.1 UPF0548 protein At2g17695 isoform X1 [Cucumis sativus]

1.8e-66

91.11

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Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DTNK RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPY+ILRQKYFAHQSTNAVKKYLT +HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

XP_022950650.1 UPF0548 protein At2g17695 [Cucurbita moschata]

1.1e-65

91.85

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPYVILRQKYFA+QSTNAVKKYLTA HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

XP_031742966.1 UPF0548 protein At2g17695 isoform X2 [Cucumis sativus]

1.8e-66

91.11

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DTNK RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPY+ILRQKYFAHQSTNAVKKYLT +HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

XP_038883223.1 UPF0548 protein At2g17695 isoform X3 [Benincasa hispida]

1.5e-65

91.11

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Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DT KA TCFSFGSGTL GHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPYVILRQKYFAHQSTNAVKKYLTA+HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV8 DUF1990 domain-containing protein

8.6e-67

91.11

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN+DTNK RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPY+ILRQKYFAHQSTNAVKKYLT +HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

A0A1S3B2T0 UPF0548 protein At2g17695

4.7e-65

89.63

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVV+PLQIVYVNEN++TNK RTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILS SKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPYVILRQKYFAHQSTNA KKYLT +HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

A0A6J1CKD3 UPF0548 protein At2g17695

5.7e-63

87.97

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Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVC+KEFLPWVVMPLQIVYVNEN+D   ARTCFSFGSGTLQGHLLAGEERFSIEMD N+QVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS
        HILSF+SYPYVILRQKYFAHQS+NAVKKY TAS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS

A0A6J1GGC4 UPF0548 protein At2g17695

5.5e-66

91.85

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPYVILRQKYFA+QSTNAVKKYLTA HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

A0A6J1IMP9 UPF0548 protein At2g17695

7.2e-66

91.11

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N RHFGLNWAFVDSSTPV  GVKFCVCAKEFLPWVVMPLQIVYVNEN+ TN ARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS
        HILSFLSYPY+ILRQKYFA+QSTNAVKKYLTA HS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTASHS

SwissProt top hits

e value

%identity

Alignment

Q86JL6 UPF0548 protein

1.9e-10

33.08

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Query:  RHFGLNWA-FVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIE-------MDSNSQVWYEILSFSK
        +HF L+W  F   +TP+  G    + +K+   W++   +I Y+ +  D       F +  GTL+ H+  GEERF IE             V+YE+LSFS+
Subjt:  RHFGLNWA-FVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIE-------MDSNSQVWYEILSFSK

Query:  PAHILSFLSYPYVILRQKYFAHQSTNAVKK
        P++ LS L YP     Q  F   S N + K
Subjt:  PAHILSFLSYPYVILRQKYFAHQSTNAVKK

Q8GXB1 UPF0548 protein At2g17695

2.9e-48

63.91

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Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS
        H LSFL YPYV LRQK+FA  S+ AV K++ AS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS

Q9RST8 UPF0548 protein DR_2035

1.3e-08

32.11

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Query:  DSSTPV-RSGVKFCVCAKEFLPW--------VVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS
        ++STP+ R G    +  + F PW         +M  +++Y+ +  D       + FG GTL GHL+ GEERF +E D+   VW+++ +FS+ A   S  +
Subjt:  DSSTPV-RSGVKFCVCAKEFLPW--------VVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS

Query:  YPYVILRQK
         P V   Q+
Subjt:  YPYVILRQK

Arabidopsis top hits

e value

%identity

Alignment

AT2G17695.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

2.1e-49

63.91

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS
        H LSFL YPYV LRQK+FA  S+ AV K++ AS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS

AT2G17695.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

2.1e-49

63.91

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS
        H LSFL YPYV LRQK+FA  S+ AV K++ AS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS

AT2G17695.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960).

2.1e-49

63.91

Show/hide

Query:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA
        K + N +HFG++WAFVD +TPV +G KFC+C KE LPWV++PLQ+VYV+E++ + K    F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPA
Subjt:  KVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPA

Query:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS
        H LSFL YPYV LRQK+FA  S+ AV K++ AS
Subjt:  HILSFLSYPYVILRQKYFAHQSTNAVKKYLTAS

Sequences

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CDS sequence

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ATGAAGGTAATAGGCAATCAGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCAGTTCGTTCAGGAGTGAAGTTTTGTGTCTGTGCCAAGGAGTTCCT
TCCATGGGTGGTGATGCCTCTTCAAATTGTATATGTAAATGAGAATAAGGATACCAATAAGGCTAGGACATGTTTCAGTTTTGGCAGTGGTACCCTTCAAGGCCATCTTC
TGGCCGGTGAAGAACGGTTTTCAATTGAGATGGACTCGAACAGCCAGGTGTGGTATGAAATTCTTTCCTTCTCAAAGCCTGCCCATATATTATCATTCCTTAGTTATCCC
TACGTAATTCTTCGGCAAAAGTATTTTGCTCATCAATCTACAAATGCAGTTAAGAAATATTTGACTGCCAGTCATTCCTAA

mRNA sequence

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Protein sequence

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MKVIGNQRHFGLNWAFVDSSTPVRSGVKFCVCAKEFLPWVVMPLQIVYVNENKDTNKARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSYP
YVILRQKYFAHQSTNAVKKYLTASHS

HG10016325 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome