; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016375 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016375
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationChr03:4590262..4595776
RNA-Seq ExpressionHG10016375
SyntenyHG10016375
Gene Ontology termsGO:0080182 - histone H3-K4 trimethylation (biological process)
GO:0048188 - Set1C/COMPASS complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR020472 - G-protein beta WD-40 repeat
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4287793.1 unnamed protein product [Prunus armeniaca]9.3e-12359.45Show/hide
Query:  NLCLRKPRGD---ATKNNKAPAAMTLFERLREAVFRFIMLCALS--KATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDD----
        +LC+ + R +    +   K  + MTL ER REAVFR IML A+S  K+T+H   G +  D     +R+  P+ D HHSEAVADCIEFIK KA  +D    
Subjt:  NLCLRKPRGD---ATKNNKAPAAMTLFERLREAVFRFIMLCALS--KATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDD----

Query:  EIILDRGSVDVD-----------DDMAVAVAVR-------------TSSYLVTASDDESIRLYDVASAT-------------------------------
             RGS   D             M V +A R              +SY+VTASDDESIRLYDV++AT                               
Subjt:  EIILDRGSVDVD-----------DDMAVAVAVR-------------TSSYLVTASDDESIRLYDVASAT-------------------------------

Query:  -------------------------VVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFD
                                 VVSLSLC+RK+CFISGSLDRTVLLWDQRAEKCQGLLRVQG+PAT YD+QG+VFA+AFGG+IRMFDARKYEKGPFD
Subjt:  -------------------------VVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFD

Query:  IFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPV
        IFS G D+SDAN+VKFSNDGRL+LLTT+DGHIHVLDSFRGTLLSTYNVKP+SS+ TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV SWMSTE EPPV
Subjt:  IFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPV

Query:  IKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        +KWAPG+LMFATGSSELSFWIPDLSKLGAYV RK
Subjt:  IKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

OMO57055.1 hypothetical protein CCACVL1_26037 [Corchorus capsularis]1.6e-11961.23Show/hide
Query:  MTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVAVAV--------
        MTL +R REAVFR IML AL+KA +HH TG+          R  YP  D HHSEAVADCIEFIK KAY+D+       S ++D   A  VA+        
Subjt:  MTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVAVAV--------

Query:  ---RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGS
           RTS+YLVTAS+DESIRLYDV+SAT                                                        VVSLSLC+R ECFISGS
Subjt:  ---RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGS

Query:  LDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTL
        LDRTVLLWDQRA+KCQGLLR QG+PA AYD+QG+VFA+A GGYIRMFDARK+EKGPF+IFS G D+SDAN+VKFSNDGRLMLLTT  GHIHVLDSFRGTL
Subjt:  LDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTL

Query:  LSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-------------STEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGA
        LSTY+VKP+SSN TLEASFSPEGMFVISGSGDG  YAWSVRSGKEVASWM             +TE EPPVIKWAPGSLMF TGS+ELSFW+PDLSKL A
Subjt:  LSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-------------STEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGA

Query:  YVDRK
        YV RK
Subjt:  YVDRK

XP_004134865.1 protein ANTHESIS POMOTING FACTOR 1 [Cucumis sativus]4.0e-11879.58Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        +TSSYLVTASDDESIRLYDVASAT                                                        VVSLSLCARKECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFS GEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        YNVKPIS NLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

XP_008440813.1 PREDICTED: WD repeat-containing protein 82-B [Cucumis melo]4.0e-11879.58Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        RTSSYLVTASDDESIRLYDVASAT                                                        VVSLSLCARKECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFS GED+SDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        YNVKPIS NLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

XP_038880888.1 protein ANTHESIS POMOTING FACTOR 1 [Benincasa hispida]1.8e-11879.58Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        RTSSYLVTASDDESIRLYDVASAT                                                        VVSLSLCARKECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVF+IAFGGYIRMFDARKYEKGPFDIFS GED+SDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

TrEMBL top hitse value%identityAlignment
A0A0A0KJC5 WD_REPEATS_REGION domain-containing protein2.0e-11879.58Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        +TSSYLVTASDDESIRLYDVASAT                                                        VVSLSLCARKECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFS GEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        YNVKPIS NLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

A0A1R3GG37 WD_REPEATS_REGION domain-containing protein7.9e-12061.23Show/hide
Query:  MTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVAVAV--------
        MTL +R REAVFR IML AL+KA +HH TG+          R  YP  D HHSEAVADCIEFIK KAY+D+       S ++D   A  VA+        
Subjt:  MTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRGSVDVDDDMAVAVAV--------

Query:  ---RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGS
           RTS+YLVTAS+DESIRLYDV+SAT                                                        VVSLSLC+R ECFISGS
Subjt:  ---RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGS

Query:  LDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTL
        LDRTVLLWDQRA+KCQGLLR QG+PA AYD+QG+VFA+A GGYIRMFDARK+EKGPF+IFS G D+SDAN+VKFSNDGRLMLLTT  GHIHVLDSFRGTL
Subjt:  LDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTL

Query:  LSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-------------STEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGA
        LSTY+VKP+SSN TLEASFSPEGMFVISGSGDG  YAWSVRSGKEVASWM             +TE EPPVIKWAPGSLMF TGS+ELSFW+PDLSKL A
Subjt:  LSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWM-------------STEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGA

Query:  YVDRK
        YV RK
Subjt:  YVDRK

A0A5A7SK88 WD repeat-containing protein 82-B2.0e-11879.58Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        RTSSYLVTASDDESIRLYDVASAT                                                        VVSLSLCARKECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFS GED+SDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        YNVKPIS NLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

A0A6J5VI20 WD_REPEATS_REGION domain-containing protein4.5e-12359.45Show/hide
Query:  NLCLRKPRGD---ATKNNKAPAAMTLFERLREAVFRFIMLCALS--KATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDD----
        +LC+ + R +    +   K  + MTL ER REAVFR IML A+S  K+T+H   G +  D     +R+  P+ D HHSEAVADCIEFIK KA  +D    
Subjt:  NLCLRKPRGD---ATKNNKAPAAMTLFERLREAVFRFIMLCALS--KATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDD----

Query:  EIILDRGSVDVD-----------DDMAVAVAVR-------------TSSYLVTASDDESIRLYDVASAT-------------------------------
             RGS   D             M V +A R              +SY+VTASDDESIRLYDV++AT                               
Subjt:  EIILDRGSVDVD-----------DDMAVAVAVR-------------TSSYLVTASDDESIRLYDVASAT-------------------------------

Query:  -------------------------VVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFD
                                 VVSLSLC+RK+CFISGSLDRTVLLWDQRAEKCQGLLRVQG+PAT YD+QG+VFA+AFGG+IRMFDARKYEKGPFD
Subjt:  -------------------------VVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFD

Query:  IFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPV
        IFS G D+SDAN+VKFSNDGRL+LLTT+DGHIHVLDSFRGTLLSTYNVKP+SS+ TLEASFSPEGMFVISGSGDGSVYAWSVRSGKEV SWMSTE EPPV
Subjt:  IFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPV

Query:  IKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        +KWAPG+LMFATGSSELSFWIPDLSKLGAYV RK
Subjt:  IKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

F6GWN2 WD_REPEATS_REGION domain-containing protein1.9e-12156.77Show/hide
Query:  ATKNNKAPAAMTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDD-------------------
        +T NN+   AM+L ER REAVFR IML ALSKAT+H     +   DV    R  YPN + HHSEAVADCIEFIK  A   D                   
Subjt:  ATKNNKAPAAMTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDD-------------------

Query:  -----------------------EIILDRGSVDVDDDMAVAVAV-------------------------RTSSYLVTASDDESIRLYDVASAT-------
                               ++   +G  + +D +A+ +                           RTSSYLVTASDDESIRLYDVA+ T       
Subjt:  -----------------------EIILDRGSVDVDDDMAVAVAV-------------------------RTSSYLVTASDDESIRLYDVASAT-------

Query:  -------------------------------------------------VVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGV
                                                         VVSLSLC+RKECFISGSLDRTVLLWDQRAEKCQGLLRVQG+PATAYD+QG+
Subjt:  -------------------------------------------------VVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGV

Query:  VFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGS
        VFAIAFGGY+R+FDARKY+KGPF+IFS G D+SDAN+VKFSNDGRLMLLTT DGHIHVLDSFRGTLLSTYNVKP+SS  TLEASFSPEGMFVISGSGDGS
Subjt:  VFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGS

Query:  VYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        VYAWSVRSGKEVASWMSTE EPPVIKWAPGSLMF TGSSELSFWIPDLSKLGAY  RK
Subjt:  VYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

SwissProt top hitse value%identityAlignment
Q58E77 WD repeat-containing protein 82-B4.6e-4037.96Show/hide
Query:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAGEDLS-
        D++ IR +   S  VVSLS+    + FISGSLD+T+ LWD R+  CQGL+ +QGKP  ++D +G++FA       ++++D R ++KGPF  F    D + 
Subjt:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAGEDLS-

Query:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL
        +   +KFSNDG+L+LL+T+ G + ++D+F+G ++ T+     S  +TLEASF+P+  F++ GS DG ++ W+  SG +VA        P   +++ P  +
Subjt:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL

Query:  MFATGSSELSFWIPDL
         FA+  S ++FW+P +
Subjt:  MFATGSSELSFWIPDL

Q5ZMV7 WD repeat-containing protein 825.1e-3937.5Show/hide
Query:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAGEDLS-
        D++ IR +   +  VV+LS+    + FISGSLD+T+ LWD R+  CQGL+ +QGKP  ++D +G++FA       ++++D R ++KGPF  F    D + 
Subjt:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAGEDLS-

Query:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL
        +   +KFSNDG+L+L++T+ G I ++D+F+G +L T+     S  +TLEASF+P+  F++ GS DG ++ W+  SG +VA        P   +++ P  +
Subjt:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL

Query:  MFATGSSELSFWIPDL
         FA+  S ++FW+P +
Subjt:  MFATGSSELSFWIPDL

Q6GL39 WD repeat-containing protein 821.5e-3836.11Show/hide
Query:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAGEDLS-
        D++ IR +   S  VV+LS+    + FISGSLD+T+ LWD R+  CQGL+ +QGKP  ++D +G++FA       ++++D R ++KGPF  F    D + 
Subjt:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAGEDLS-

Query:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL
        +   +KFSNDG+L+L++T+ G + ++D+F+G ++ T+     S  +TLEA+F+P+  F++ GS DG ++ W+  SG +VA        P   +++ P  +
Subjt:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL

Query:  MFATGSSELSFWIPDL
         F +  S ++FW+P +
Subjt:  MFATGSSELSFWIPDL

Q6NV31 WD repeat-containing protein 822.5e-3837.04Show/hide
Query:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAG-EDLS
        D++ IR +   +  VV+LS+    + FISGSLD+T+ LWD R+  CQGL+ +QGKP  ++D +G++FA       ++++D R ++KGPF  F    E   
Subjt:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGG-YIRMFDARKYEKGPFDIFSAG-EDLS

Query:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL
        +   +KFSNDG+L+L++T+ G + VLD+F+G +L ++     S  + LEASF+P+  F++ GS DG ++ W+  SG +VA        P   +++ P  +
Subjt:  DANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEP-PVIKWAPGSL

Query:  MFATGSSELSFWIPDL
         FA+  S ++FW+P +
Subjt:  MFATGSSELSFWIPDL

Q9LYK6 Protein ANTHESIS POMOTING FACTOR 11.4e-5246.48Show/hide
Query:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAF-GGYIRMFDARKYEKGPFDIFSAGEDLSD
        D+  +R +      VVSL +    + F+SGSLDR+V LWD R   CQG+L ++G+PA AYD+QG+VFAIA  GG +++FD+R Y+KGPFD F  G D ++
Subjt:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAF-GGYIRMFDARKYEKGPFDIFSAGEDLSD

Query:  ANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMF
         N +KFSNDG+ MLLTT++ +I+VLD++RG     ++++P S    +EA+F+P+G +V+SGSGDG+++AW++ +  EVA W +       +KWAP   MF
Subjt:  ANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMF

Query:  ATGSSELSFWIPD
           S+ L+FWIP+
Subjt:  ATGSSELSFWIPD

Arabidopsis top hitse value%identityAlignment
AT3G49660.1 Transducin/WD40 repeat-like superfamily protein1.4e-1225Show/hide
Query:  YLVTASDDESIRLYDVASATVV-------SLSLCA----RKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYD---EQGVVFAIAFGGYIRMFDA
        ++V+ASDD++++L+DV + +++       + + C     +    +SGS D TV +WD    KC  +L     P TA D   +  ++ + ++ G  R++D+
Subjt:  YLVTASDDESIRLYDVASATVV-------SLSLCA----RKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYD---EQGVVFAIAFGGYIRMFDA

Query:  RKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFS-PEGMFVISGSGDGSVYAWSVRSGK
             G        ++    + V+FS +G+ +L+ T D  + + +      L TY    +++   + ++FS   G  ++SGS D  V+ W + S K
Subjt:  RKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFS-PEGMFVISGSGDGSVYAWSVRSGK

AT5G14530.1 Transducin/WD40 repeat-like superfamily protein9.8e-5446.48Show/hide
Query:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAF-GGYIRMFDARKYEKGPFDIFSAGEDLSD
        D+  +R +      VVSL +    + F+SGSLDR+V LWD R   CQG+L ++G+PA AYD+QG+VFAIA  GG +++FD+R Y+KGPFD F  G D ++
Subjt:  DDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAF-GGYIRMFDARKYEKGPFDIFSAGEDLSD

Query:  ANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMF
         N +KFSNDG+ MLLTT++ +I+VLD++RG     ++++P S    +EA+F+P+G +V+SGSGDG+++AW++ +  EVA W +       +KWAP   MF
Subjt:  ANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMF

Query:  ATGSSELSFWIPD
           S+ L+FWIP+
Subjt:  ATGSSELSFWIPD

AT5G66240.1 Transducin/WD40 repeat-like superfamily protein7.1e-9763.67Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        +TS+ +VTASDD+SIRLYDVASAT                                                        VVSLSLC+  ECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQR EKCQGLLRVQG+PA AYD+QG++FAIAFGGYIRMFDAR YEKGPF+IFS G DLS+AN+VKFSNDGRLMLLTT DG IHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        ++VKP++   TL+A+FSPEGMFV+SGSGDGS +AW VRSGK+V SWM    EPPVIKW PGS MF TGSSEL+F IPDLSKL AY  RK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

AT5G66240.2 Transducin/WD40 repeat-like superfamily protein7.1e-9763.67Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        +TS+ +VTASDD+SIRLYDVASAT                                                        VVSLSLC+  ECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQR EKCQGLLRVQG+PA AYD+QG++FAIAFGGYIRMFDAR YEKGPF+IFS G DLS+AN+VKFSNDGRLMLLTT DG IHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        ++VKP++   TL+A+FSPEGMFV+SGSGDGS +AW VRSGK+V SWM    EPPVIKW PGS MF TGSSEL+F IPDLSKL AY  RK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK

AT5G66240.3 Transducin/WD40 repeat-like superfamily protein2.5e-9462.98Show/hide
Query:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR
        +TS+ +VTASDD+SIRLYDVASAT                                                        VVSLSLC+  ECFISGSLDR
Subjt:  RTSSYLVTASDDESIRLYDVASAT--------------------------------------------------------VVSLSLCARKECFISGSLDR

Query:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST
        TVLLWDQR EKCQGLLRVQG+PA AYD+QG++FAIAFGGYIRMFDAR YEKGPF+IFS G DLS+AN+VKFSNDGRLMLLTT DG IHVLDSFRGTLLST
Subjt:  TVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARKYEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLST

Query:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
        ++VKP++   TL+A+FSPEGMFV+  SGDGS +AW VRSGK+V SWM    EPPVIKW PGS MF TGSSEL+F IPDLSKL AY  RK
Subjt:  YNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKWAPGSLMFATGSSELSFWIPDLSKLGAYVDRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAAAACCAGACGAGTCCCCCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCCCGGCGGCCAT
GACTCTGTTCGAGCGCCTCCGCGAGGCCGTTTTCCGTTTCATTATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCACCGGAGCCGCCTTCCAAGACGACGTCG
TCGTTAGGCGGCGACACTCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTTGCCGATTGCATCGAGTTCATTAAGATGAAGGCGTACTCCGACGACGAGATAATT
CTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGGCGGTGGCGGTCAGGACTTCAAGCTATCTGGTGACTGCAAGTGATGATGAATCCATCCGACTATATGA
TGTTGCCAGTGCAACAGTTGTATCACTCAGCTTATGCGCTCGCAAAGAATGCTTTATATCCGGCTCTCTTGATCGGACTGTTTTGCTTTGGGATCAAAGAGCAGAGAAGT
GCCAGGGTCTTTTACGGGTACAAGGAAAGCCAGCTACAGCATATGATGAGCAAGGTGTGGTCTTTGCCATTGCCTTTGGAGGTTACATAAGGATGTTTGATGCTCGCAAA
TATGAGAAGGGTCCTTTTGATATATTTTCTGCTGGGGAAGATCTATCCGATGCAAATATTGTAAAGTTCAGTAATGACGGGAGACTCATGTTGTTGACAACTTCGGATGG
GCATATTCATGTTCTCGATTCTTTTAGGGGAACACTATTATCTACGTACAATGTAAAACCCATTTCAAGCAATTTGACGTTGGAGGCATCTTTTAGTCCAGAGGGAATGT
TTGTGATATCAGGTTCGGGAGATGGCAGTGTTTATGCTTGGAGTGTAAGGAGTGGAAAAGAGGTTGCAAGCTGGATGAGCACTGAAATGGAGCCTCCTGTCATAAAGTGG
GCTCCGGGAAGTCTAATGTTTGCAACTGGATCTTCTGAACTGTCATTTTGGATACCTGATTTGTCTAAATTGGGAGCTTATGTAGACAGAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAAAACCAGACGAGTCCCCCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCCCGGCGGCCAT
GACTCTGTTCGAGCGCCTCCGCGAGGCCGTTTTCCGTTTCATTATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCACCGGAGCCGCCTTCCAAGACGACGTCG
TCGTTAGGCGGCGACACTCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTTGCCGATTGCATCGAGTTCATTAAGATGAAGGCGTACTCCGACGACGAGATAATT
CTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGGCGGTGGCGGTCAGGACTTCAAGCTATCTGGTGACTGCAAGTGATGATGAATCCATCCGACTATATGA
TGTTGCCAGTGCAACAGTTGTATCACTCAGCTTATGCGCTCGCAAAGAATGCTTTATATCCGGCTCTCTTGATCGGACTGTTTTGCTTTGGGATCAAAGAGCAGAGAAGT
GCCAGGGTCTTTTACGGGTACAAGGAAAGCCAGCTACAGCATATGATGAGCAAGGTGTGGTCTTTGCCATTGCCTTTGGAGGTTACATAAGGATGTTTGATGCTCGCAAA
TATGAGAAGGGTCCTTTTGATATATTTTCTGCTGGGGAAGATCTATCCGATGCAAATATTGTAAAGTTCAGTAATGACGGGAGACTCATGTTGTTGACAACTTCGGATGG
GCATATTCATGTTCTCGATTCTTTTAGGGGAACACTATTATCTACGTACAATGTAAAACCCATTTCAAGCAATTTGACGTTGGAGGCATCTTTTAGTCCAGAGGGAATGT
TTGTGATATCAGGTTCGGGAGATGGCAGTGTTTATGCTTGGAGTGTAAGGAGTGGAAAAGAGGTTGCAAGCTGGATGAGCACTGAAATGGAGCCTCCTGTCATAAAGTGG
GCTCCGGGAAGTCTAATGTTTGCAACTGGATCTTCTGAACTGTCATTTTGGATACCTGATTTGTCTAAATTGGGAGCTTATGTAGACAGAAAATAG
Protein sequenceShow/hide protein sequence
MAEKTRRVPRKTKAPANLCLRKPRGDATKNNKAPAAMTLFERLREAVFRFIMLCALSKATNHHPTGAAFQDDVVVRRRHSYPNVDHHHSEAVADCIEFIKMKAYSDDEII
LDRGSVDVDDDMAVAVAVRTSSYLVTASDDESIRLYDVASATVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFGGYIRMFDARK
YEKGPFDIFSAGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLLSTYNVKPISSNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW
APGSLMFATGSSELSFWIPDLSKLGAYVDRK