; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016400 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016400
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein SHI RELATED SEQUENCE 1
Genome locationChr03:4786424..4787357
RNA-Seq ExpressionHG10016400
SyntenyHG10016400
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149998.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus]3.5e-11591.21Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH----QLHLH-GDNNPKRHRDYNPTSSSSLA
        MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH H    QL LH GDNNPKRHRDYN   SSSLA
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH----QLHLH-GDNNPKRHRDYNPTSSSSLA

Query:  CTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA
        CTLIPTNNNTSG EIGNFP ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGGSSSGV  QPLNFIA AADA
Subjt:  CTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA

Query:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        TT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

XP_008440782.1 PREDICTED: protein SHI RELATED SEQUENCE 1 [Cucumis melo]2.3e-11490.76Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLAC
        MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH H   QL LH GDNNPKRHRDYN   SSSLAC
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLAC

Query:  TLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADAT
        TLIPTNNNTSG EIGNFP ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGGSSSGV  QPLNFI  AAD T
Subjt:  TLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADAT

Query:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        T SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

XP_022979003.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]7.4e-11389.12Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
        MI SGSGGGGISCQDCGNQAKKDC+HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP

Query:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGGGSSSGVQMQPLNFIAAAADA
          NNTSG EIGNFP ELNSPAVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS     GGGGSSSGV  QPLNFI  A DA
Subjt:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGGGSSSGVQMQPLNFIAAAADA

Query:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        TTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

XP_023543255.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita pepo subsp. pepo]1.3e-11289.5Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
        MI SGSGGGGISCQDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP

Query:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS----GGGGSSSGVQMQPLNFIAAAADAT
          NNTSG EIGNFP ELNSPAVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS    GGGGSSSGV  QPLNFI  A DAT
Subjt:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS----GGGGSSSGVQMQPLNFIAAAADAT

Query:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        TASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

XP_038881348.1 protein SHI RELATED SEQUENCE 1-like [Benincasa hispida]4.9e-11794.71Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQT--HHQHQLHLHGDNNPKRHRDYNPTSSSSLACTL
        MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQ+  HH HQLHLHGDNNPKRHRDYNPTS+SSLACTL
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQT--HHQHQLHLHGDNNPKRHRDYNPTSSSSLACTL

Query:  IPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTA
        IPTNNNTSG EIGNFP ELNSPAVFRCVRV+STDDTD+QYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGV  QPLNFIA AADATTA
Subjt:  IPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTA

Query:  SGGSTAALPLMDPSSLYSTPLNSFMAG
        SGGSTAALPLMDPSSLYSTPLNSFMAG
Subjt:  SGGSTAALPLMDPSSLYSTPLNSFMAG

TrEMBL top hitse value%identityAlignment
A0A0A0KGL4 Uncharacterized protein1.7e-11591.21Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH----QLHLH-GDNNPKRHRDYNPTSSSSLA
        MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH H    QL LH GDNNPKRHRDYN   SSSLA
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH----QLHLH-GDNNPKRHRDYNPTSSSSLA

Query:  CTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA
        CTLIPTNNNTSG EIGNFP ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGGSSSGV  QPLNFIA AADA
Subjt:  CTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA

Query:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        TT SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

A0A1S3B2J6 protein SHI RELATED SEQUENCE 11.1e-11490.76Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLAC
        MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH H   QL LH GDNNPKRHRDYN   SSSLAC
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLAC

Query:  TLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADAT
        TLIPTNNNTSG EIGNFP ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGGSSSGV  QPLNFI  AAD T
Subjt:  TLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADAT

Query:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        T SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

A0A5A7SN81 Protein SHI RELATED SEQUENCE 11.1e-11490.76Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLAC
        MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH H   QL LH GDNNPKRHRDYN   SSSLAC
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQH---QLHLH-GDNNPKRHRDYNPTSSSSLAC

Query:  TLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADAT
        TLIPTNNNTSG EIGNFP ELNSPAVFRCVRV+S DDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPP ETSSGGGGSSSGV  QPLNFI  AAD T
Subjt:  TLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADAT

Query:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        T SGGSTAALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

A0A6J1GE84 protein SHI RELATED SEQUENCE 1-like8.0e-11389.12Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
        MI SGSGGGGISCQDCGNQAKKDC HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP

Query:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGGGSSSGVQMQPLNFIAAAADA
          NNTSG EIGNFP ELNSPAVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS     GGGGSSSGV  QPLNFI  A DA
Subjt:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGGGSSSGVQMQPLNFIAAAADA

Query:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        TTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

A0A6J1IUW1 protein SHI RELATED SEQUENCE 1-like3.6e-11389.12Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
        MI SGSGGGGISCQDCGNQAKKDC+HMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQ+KLAALQT  QHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP

Query:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGGGSSSGVQMQPLNFIAAAADA
          NNTSG EIGNFP ELNSPAVFRCVRV+STD++DDQYAYQTAVNIGGHVFKGILYDQGPE NYIPPAETSS     GGGGSSSGV  QPLNFI  A DA
Subjt:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSS-----GGGGSSSGVQMQPLNFIAAAADA

Query:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        TTASGGS+AALPL+DPSSLYSTPLNSFMAGTQFF PPRS
Subjt:  TTASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 17.0e-6659.4Show/hide
Query:  SGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNT
        SGGGGISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPAAKRRERQ +LAALQ   Q Q H + +NN K  R     S+SSL  T +P  +NT
Subjt:  SGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNT

Query:  SGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNY--IPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASGGST
        +G E+G FP ++ + AVF+C++++S +D +DQ AYQ AV+IGGHVFKGILYDQG E+ Y  +  A   +  GGS+ GVQ    N  A A   TT+ G +T
Subjt:  SGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNY--IPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASGGST

Query:  AALP--LMDPSSLYSTPLNSFM-AGTQFFPPPRS
        AA P   +DP SL+  PL++FM AGTQFFPP RS
Subjt:  AALP--LMDPSSLYSTPLNSFM-AGTQFFPPPRS

Q9FXH7 Protein SHI RELATED SEQUENCE 71.2e-5248.58Show/hide
Query:  ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTS
        + S +GG      G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRRERQ +LA L        +  G     D++ +  ++ +   
Subjt:  ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTS

Query:  SSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIA
         S+LACT +  N ++SG E  + PPE++SPAVFRC+RV+S DD D++YAYQTAV+IGGHVFKGILYDQGP +++   + + +G       + +      A
Subjt:  SSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIA

Query:  AAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GTQFFPPPR
        A  +A TA   +  ++   DPSSLY   +TP N+F+A GT FF   R
Subjt:  AAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GTQFFPPPR

Q9LQZ5 Protein SHI RELATED SEQUENCE 57.0e-5853.85Show/hide
Query:  GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH------QHQLHLH----GDNNPKRHRDYNPTSSSSLACTL
        GG++CQDCGNQAKKDC HMRCRTCCKSRGFHC+THVKSTWVPAAKRRER  +LA+LQ H       Q+   L     GDNN    +D++    S+LA T 
Subjt:  GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH------QHQLHLH----GDNNPKRHRDYNPTSSSSLACTL

Query:  IPTNNNTSGFEIG-NFPPELNSPAVFRCVRVTS-TDDTDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA
        +   N+ SG E+  + PPE+NSPA+FRCVRV+S  +D DDQ YAYQTAVNIGGH+FKGILYDQGPE+                       LN +A+ A  
Subjt:  IPTNNNTSGFEIG-NFPPELNSPAVFRCVRVTS-TDDTDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA

Query:  T--------TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        T        T +G +   L ++DPSSLY   LNSF+AGT FF PPRS
Subjt:  T--------TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

Q9SD40 Protein SHI RELATED SEQUENCE 12.8e-7059.27Show/hide
Query:  SGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNN
        SG G GG+SCQDCGNQAKKDCSHMRCRTCCKSRGF C THV+STWVPAAKRRERQ +LA +Q   Q QL   G++ PKRHR+  P +SSSL CT IP++ 
Subjt:  SGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNN

Query:  NTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN------NYIPPAETSSGGGGSSSGVQMQPLNFI-------A
          SG E+GNFP E++S AVFRCVRV+S +D ++++AYQTAV+IGGH+FKGILYD GP +      N +   E+SSGGGG+      Q LN I       A
Subjt:  NTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN------NYIPPAETSSGGGGSSSGVQMQPLNFI-------A

Query:  AAADATTASGG----STAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
         A+ +T   GG    S AA   +DP++LY TP+N+FMAGTQFFP PRS
Subjt:  AAADATTASGG----STAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

Q9XGX0 Protein SHORT INTERNODES1.6e-6559.02Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
        M+ SGSG GG SCQDCGNQ+KKDCSHMRCRTCCKSRG  C THVKSTWVPAAKRRERQ +L+  Q   Q      G + PKR R+  P  S+S+A T IP
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP

Query:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASG
         +NNTSG E+GNFPPE++S AVFRCVRV+S DD +++YAY+TAV+IGGHVFKG+LYDQG       PAE SS GGGS      QPLN I A   A+++S 
Subjt:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASG

Query:  ---------GSTAALPLMDPSSL-YSTPLNSFMAGTQFFPPPRS
                 GST+    +DP+SL Y TP+N+FM GT FF   RS
Subjt:  ---------GSTAALPLMDPSSL-YSTPLNSFMAGTQFFPPPRS

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 78.3e-5448.58Show/hide
Query:  ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTS
        + S +GG      G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRRERQ +LA L        +  G     D++ +  ++ +   
Subjt:  ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTS

Query:  SSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIA
         S+LACT +  N ++SG E  + PPE++SPAVFRC+RV+S DD D++YAYQTAV+IGGHVFKGILYDQGP +++   + + +G       + +      A
Subjt:  SSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIA

Query:  AAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GTQFFPPPR
        A  +A TA   +  ++   DPSSLY   +TP N+F+A GT FF   R
Subjt:  AAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GTQFFPPPR

AT1G19790.2 SHI-related sequence 78.3e-5448.58Show/hide
Query:  ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTS
        + S +GG      G ++CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWV AAKRRERQ +LA L        +  G     D++ +  ++ +   
Subjt:  ISSGSGG------GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHG-----DNNPKRHRDYNPTS

Query:  SSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIA
         S+LACT +  N ++SG E  + PPE++SPAVFRC+RV+S DD D++YAYQTAV+IGGHVFKGILYDQGP +++   + + +G       + +      A
Subjt:  SSSLACTLIPTNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIA

Query:  AAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GTQFFPPPR
        A  +A TA   +  ++   DPSSLY   +TP N+F+A GT FF   R
Subjt:  AAADATTASGGSTAALPLMDPSSLY---STPLNSFMA-GTQFFPPPR

AT1G75520.1 SHI-related sequence 55.0e-5953.85Show/hide
Query:  GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH------QHQLHLH----GDNNPKRHRDYNPTSSSSLACTL
        GG++CQDCGNQAKKDC HMRCRTCCKSRGFHC+THVKSTWVPAAKRRER  +LA+LQ H       Q+   L     GDNN    +D++    S+LA T 
Subjt:  GGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHH------QHQLHLH----GDNNPKRHRDYNPTSSSSLACTL

Query:  IPTNNNTSGFEIG-NFPPELNSPAVFRCVRVTS-TDDTDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA
        +   N+ SG E+  + PPE+NSPA+FRCVRV+S  +D DDQ YAYQTAVNIGGH+FKGILYDQGPE+                       LN +A+ A  
Subjt:  IPTNNNTSGFEIG-NFPPELNSPAVFRCVRVTS-TDDTDDQ-YAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADA

Query:  T--------TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
        T        T +G +   L ++DPSSLY   LNSF+AGT FF PPRS
Subjt:  T--------TASGGSTAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

AT3G51060.1 Lateral root primordium (LRP) protein-related2.0e-7159.27Show/hide
Query:  SGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNN
        SG G GG+SCQDCGNQAKKDCSHMRCRTCCKSRGF C THV+STWVPAAKRRERQ +LA +Q   Q QL   G++ PKRHR+  P +SSSL CT IP++ 
Subjt:  SGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNN

Query:  NTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN------NYIPPAETSSGGGGSSSGVQMQPLNFI-------A
          SG E+GNFP E++S AVFRCVRV+S +D ++++AYQTAV+IGGH+FKGILYD GP +      N +   E+SSGGGG+      Q LN I       A
Subjt:  NTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPEN------NYIPPAETSSGGGGSSSGVQMQPLNFI-------A

Query:  AAADATTASGG----STAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS
         A+ +T   GG    S AA   +DP++LY TP+N+FMAGTQFFP PRS
Subjt:  AAADATTASGG----STAALPLMDPSSLYSTPLNSFMAGTQFFPPPRS

AT5G66350.1 Lateral root primordium (LRP) protein-related1.1e-6659.02Show/hide
Query:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP
        M+ SGSG GG SCQDCGNQ+KKDCSHMRCRTCCKSRG  C THVKSTWVPAAKRRERQ +L+  Q   Q      G + PKR R+  P  S+S+A T IP
Subjt:  MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIP

Query:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASG
         +NNTSG E+GNFPPE++S AVFRCVRV+S DD +++YAY+TAV+IGGHVFKG+LYDQG       PAE SS GGGS      QPLN I A   A+++S 
Subjt:  TNNNTSGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASG

Query:  ---------GSTAALPLMDPSSL-YSTPLNSFMAGTQFFPPPRS
                 GST+    +DP+SL Y TP+N+FM GT FF   RS
Subjt:  ---------GSTAALPLMDPSSL-YSTPLNSFMAGTQFFPPPRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGCTCGGGATCCGGTGGAGGTGGAATAAGTTGCCAAGATTGTGGCAACCAAGCGAAGAAAGACTGCAGCCATATGCGGTGTAGAACATGCTGCAAGAGC
CGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCCAAGCGTCGCGAGCGCCAAGACAAACTGGCTGCCTTACAAACCCATCATCAACAC
CAACTCCATCTTCATGGAGACAATAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCCTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAATACT
TCTGGGTTCGAAATTGGGAATTTCCCACCCGAGTTAAACTCTCCGGCTGTCTTCCGTTGCGTTCGTGTCACCTCTACCGACGATACCGACGATCAATACGCCTAT
CAAACGGCCGTAAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCGGAAAATAATTATATTCCACCGGCTGAGACCTCATCCGGTGGTGGT
GGGAGTAGTAGTGGAGTGCAAATGCAACCACTGAATTTCATCGCTGCTGCTGCTGATGCCACCACCGCAAGCGGTGGTTCCACAGCCGCATTACCCTTGATGGAT
CCCTCTTCTTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCCACCACCAAGATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGCTCGGGATCCGGTGGAGGTGGAATAAGTTGCCAAGATTGTGGCAACCAAGCGAAGAAAGACTGCAGCCATATGCGGTGTAGAACATGCTGCAAGAGC
CGAGGATTCCATTGCGAAACCCATGTGAAAAGCACTTGGGTCCCTGCCGCCAAGCGTCGCGAGCGCCAAGACAAACTGGCTGCCTTACAAACCCATCATCAACAC
CAACTCCATCTTCATGGAGACAATAATCCGAAACGCCACAGAGATTATAACCCCACTTCCTCCTCTTCTCTTGCCTGCACTCTCATCCCCACCAACAACAATACT
TCTGGGTTCGAAATTGGGAATTTCCCACCCGAGTTAAACTCTCCGGCTGTCTTCCGTTGCGTTCGTGTCACCTCTACCGACGATACCGACGATCAATACGCCTAT
CAAACGGCCGTAAATATCGGAGGACATGTTTTCAAGGGAATTCTATACGATCAAGGACCGGAAAATAATTATATTCCACCGGCTGAGACCTCATCCGGTGGTGGT
GGGAGTAGTAGTGGAGTGCAAATGCAACCACTGAATTTCATCGCTGCTGCTGCTGATGCCACCACCGCAAGCGGTGGTTCCACAGCCGCATTACCCTTGATGGAT
CCCTCTTCTTTATATTCAACGCCGCTGAATAGCTTCATGGCGGGTACGCAATTCTTCCCACCACCAAGATCTTAA
Protein sequenceShow/hide protein sequence
MISSGSGGGGISCQDCGNQAKKDCSHMRCRTCCKSRGFHCETHVKSTWVPAAKRRERQDKLAALQTHHQHQLHLHGDNNPKRHRDYNPTSSSSLACTLIPTNNNT
SGFEIGNFPPELNSPAVFRCVRVTSTDDTDDQYAYQTAVNIGGHVFKGILYDQGPENNYIPPAETSSGGGGSSSGVQMQPLNFIAAAADATTASGGSTAALPLMD
PSSLYSTPLNSFMAGTQFFPPPRS