CuGenDBv2

Gene ID	HG10016451
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Genome location	Chr03:5146797..5148802
RNA-Seq Expression	HG10016451
Synteny	HG10016451
Gene Ontology terms	GO:0016554 - cytidine to uridine editing (biological process) GO:1900865 - chloroplast RNA modification (biological process) GO:0009507 - chloroplast (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR032867 - DYW domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143583.2 pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus]

2.1e-98

89.29

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        ACWIHRDFL+GSQ+GAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMK+L VPI PGKSS+TLNGIVHEFLAGHQDHP MEQI LKLK++AERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        QDEGYEPATKDLLLDLENEEKE AMAQHSEKLAIAFGLINTKPG TIRV+KNLR+C DCH VAKLVS+IY REIIMRDRVRFHHFRDG+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

XP_008440725.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Cucumis melo]

6.0e-101

91.84

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Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATILAA+GKWKEAAEVRLKMKNL VPI PGKSSITLNGIVHEFLAGHQDHP MEQIHLKLK++AERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        QDEGYEPATKDLLLDLENEEKE A+AQHSEKLAIAFGLINTKPG TIRVVKNLR+C DCH VAKLVS+IYCREIIMRDRVRFHHFRDG+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

XP_022978438.1 pentatricopeptide repeat-containing protein At5g66520 [Cucurbita maxima]

1.1e-94

88.78

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNG+VHEFLAGHQDHP MEQI  KL +V ERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        Q EGYEPATKDLLLDLENE KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+SRIY REIIMRDRVRFHHFR G+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

XP_023543056.1 pentatricopeptide repeat-containing protein At5g66520 [Cucurbita pepo subsp. pepo]

5.4e-94

87.76

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLR+PIPPGKSSITLNG+VH+FLAGHQDHP MEQI  KL +V ERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        Q EGYEPATKDLLLDLENE KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+SRIY REIIMRDRVRFHHFR GNCSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

XP_038882528.1 pentatricopeptide repeat-containing protein At5g66520 [Benincasa hispida]

1.4e-97

88.27

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Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATI AAEGKWKEAAEVRLKMKNL V IPPGKSSIT+NG+VHEFLAG QDHP ME+IHLKLK++AERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        +DEGYEP+TKDLLLDLENEEKE AMAQHSEKLAIAFGLINTKPG TIRV+KNLRVC DCH VAKL+S+IYCR IIMRDRVRFHHFR+GNCSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKE0 DYW_deaminase domain-containing protein

1.0e-98

89.29

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        ACWIHRDFL+GSQ+GAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMK+L VPI PGKSS+TLNGIVHEFLAGHQDHP MEQI LKLK++AERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        QDEGYEPATKDLLLDLENEEKE AMAQHSEKLAIAFGLINTKPG TIRV+KNLR+C DCH VAKLVS+IY REIIMRDRVRFHHFRDG+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

A0A1S3B1S8 pentatricopeptide repeat-containing protein At5g66520

2.9e-101

91.84

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATILAA+GKWKEAAEVRLKMKNL VPI PGKSSITLNGIVHEFLAGHQDHP MEQIHLKLK++AERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        QDEGYEPATKDLLLDLENEEKE A+AQHSEKLAIAFGLINTKPG TIRVVKNLR+C DCH VAKLVS+IYCREIIMRDRVRFHHFRDG+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

A0A5D3CKZ8 Pentatricopeptide repeat-containing protein

2.9e-101

91.84

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        ACWIHRDFLVGSQIGAHL+EVDSDHSGRYIQLATILAA+GKWKEAAEVRLKMKNL VPI PGKSSITLNGIVHEFLAGHQDHP MEQIHLKLK++AERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        QDEGYEPATKDLLLDLENEEKE A+AQHSEKLAIAFGLINTKPG TIRVVKNLR+C DCH VAKLVS+IYCREIIMRDRVRFHHFRDG+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

A0A6J1GDX2 pentatricopeptide repeat-containing protein At5g66520

1.3e-93

87.24

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLR+PIPPGKSSITLNG+VHEFLAGHQDHP MEQI  KL +V ERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        Q EGYEPATKDLLLDLE+E KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+S+IY REIIMRDRVRFHHFR GNCSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

A0A6J1IT43 pentatricopeptide repeat-containing protein At5g66520

5.3e-95

88.78

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IHRDFLVG QIGAHL+EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNG+VHEFLAGHQDHP MEQI  KL +V ERL+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        Q EGYEPATKDLLLDLENE KE A+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVC DCH VAKL+SRIY REIIMRDRVRFHHFR G+CSCKDYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

SwissProt top hits

e value

%identity

Alignment

O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic

2.1e-48

48.22

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IH +  +       L+E++  + G ++ L+ I A  GKW+  +E+R  M+   +   PG SSI ++G++HEFL+G   HP  E+++ KL EV E+L+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEE-KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
         + GYEP    +L  +E EE KE ++  HSEKLAI +GLI+T+    IRV+KNLRVCGDCH+VAKL+S++Y REII+RDR RFHHFR+G CSC D+W
Subjt:  QDEGYEPATKDLLLDLENEE-KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Q9FI80 Pentatricopeptide repeat-containing protein At5g48910

2.1e-48

45.41

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC +  +  +G ++   LM++    SG Y+ L+ + A++G W E +E+RL+MK   +   PG S I ++G++HEF+     HP  ++I+  L E++++L+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
           GY P T  +LL+LE E+KE  +  HSEK+A AFGLI+T PG  IR+VKNLR+C DCH+  KL+S++Y R+I +RDR RFHHF+DG+CSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Q9FJY7 Pentatricopeptide repeat-containing protein At5g66520

2.3e-55

53.3

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IH++  +G +IG  L+ +D  H GRY+  A I A + KW +AAE R  MK   V   PG S+I+L G  HEFLAG + HP +E+I  K + +  +L+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDL-ENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        ++ GY P  +++LLDL +++E+EA + QHSEKLAI +GLI TKPG  IR++KNLRVC DCH V KL+S+IY R+I+MRDR RFHHFRDG CSC DYW
Subjt:  QDEGYEPATKDLLLDL-ENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic

1.2e-48

46.94

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC +H +  +G     +L++++ ++ G Y+ L+ I A+ G+W E A+ R  + +  +   PG SSI ++ +VHEF+ G + HP   +I+  L+E+ E L 
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        +  G+ P T ++L ++E E KE A+  HSEKLAIAFGLI+TKPG  + +VKNLRVC +CH   KL+S+IY REII RDR RFHHFRDG CSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial

9.4e-49

49.49

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IH++  +     A L E+DS + G Y+ L+ I A  G+WK+   VR+ MKN  +  PPG S + LNG VH FL G ++HP  E+I+  L E+  +L 
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
         + GY   T  +  D++ EEKE  +  HSEKLAIAFG++NT PG+T+ VVKNLRVC DCH V KL+S+I  RE ++RD  RFHHF+DG CSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Arabidopsis top hits

e value

%identity

Alignment

AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein

8.7e-50

46.94

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC +H +  +G     +L++++ ++ G Y+ L+ I A+ G+W E A+ R  + +  +   PG SSI ++ +VHEF+ G + HP   +I+  L+E+ E L 
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        +  G+ P T ++L ++E E KE A+  HSEKLAIAFGLI+TKPG  + +VKNLRVC +CH   KL+S+IY REII RDR RFHHFRDG CSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.5e-49

48.22

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IH +  +       L+E++  + G ++ L+ I A  GKW+  +E+R  M+   +   PG SSI ++G++HEFL+G   HP  E+++ KL EV E+L+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEE-KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
         + GYEP    +L  +E EE KE ++  HSEKLAI +GLI+T+    IRV+KNLRVCGDCH+VAKL+S++Y REII+RDR RFHHFR+G CSC D+W
Subjt:  QDEGYEPATKDLLLDLENEE-KEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein

6.7e-50

49.49

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IH++  +     A L E+DS + G Y+ L+ I A  G+WK+   VR+ MKN  +  PPG S + LNG VH FL G ++HP  E+I+  L E+  +L 
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
         + GY   T  +  D++ EEKE  +  HSEKLAIAFG++NT PG+T+ VVKNLRVC DCH V KL+S+I  RE ++RD  RFHHF+DG CSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein

1.5e-49

45.41

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC +  +  +G ++   LM++    SG Y+ L+ + A++G W E +E+RL+MK   +   PG S I ++G++HEF+     HP  ++I+  L E++++L+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
           GY P T  +LL+LE E+KE  +  HSEK+A AFGLI+T PG  IR+VKNLR+C DCH+  KL+S++Y R+I +RDR RFHHF+DG+CSC DYW
Subjt:  QDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.6e-56

53.3

Show/hide

Query:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ
        AC IH++  +G +IG  L+ +D  H GRY+  A I A + KW +AAE R  MK   V   PG S+I+L G  HEFLAG + HP +E+I  K + +  +L+
Subjt:  ACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLKLKEVAERLQ

Query:  QDEGYEPATKDLLLDL-ENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW
        ++ GY P  +++LLDL +++E+EA + QHSEKLAI +GLI TKPG  IR++KNLRVC DCH V KL+S+IY R+I+MRDR RFHHFRDG CSC DYW
Subjt:  QDEGYEPATKDLLLDL-ENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

Sequences

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CDS sequence

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ATGGGTGAGGCACTTCAAGTTCATGGACTGGTTATCAAACTGGGATTTGGGTCGGATGCCTGTTGGATTCATAGAGATTTTCTGGTGGGTAGCCAAATCGGAGCCCACCT
GATGGAAGTTGATTCAGATCATAGCGGGCGGTACATTCAGTTGGCTACCATTTTAGCTGCAGAAGGTAAGTGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATC
TGAGAGTCCCAATTCCCCCAGGAAAGAGTTCAATAACTTTGAATGGCATTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACATATGGAGCAGATTCATTTGAAA
CTGAAAGAGGTTGCAGAGAGGCTACAACAAGACGAAGGTTATGAACCTGCTACTAAAGATTTATTACTTGACCTTGAGAATGAGGAGAAAGAGGCTGCAATGGCTCAACA
TAGTGAGAAGTTGGCCATTGCTTTTGGATTGATCAATACGAAACCAGGAGCGACGATTCGAGTTGTTAAGAATCTTAGGGTCTGCGGAGATTGTCACGCCGTTGCGAAGC
TCGTATCTCGAATCTATTGTAGAGAGATTATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAATTGTTCTTGCAAAGATTACTGGTAG

mRNA sequence

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Protein sequence

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MGEALQVHGLVIKLGFGSDACWIHRDFLVGSQIGAHLMEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNLRVPIPPGKSSITLNGIVHEFLAGHQDHPHMEQIHLK
LKEVAERLQQDEGYEPATKDLLLDLENEEKEAAMAQHSEKLAIAFGLINTKPGATIRVVKNLRVCGDCHAVAKLVSRIYCREIIMRDRVRFHHFRDGNCSCKDYW

HG10016451 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome