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HG10016547 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016547
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationChr03:5830750..5832800
RNA-Seq ExpressionHG10016547
SyntenyHG10016547
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005507 - copper ion binding (molecular function)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036313.1 EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo var. makuwa]7.5e-4297.53Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLDS+SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

KAG6604039.1 EPIDERMAL PATTERNING FACTOR-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3892.59Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        GI FEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMP RAGRLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

KGN48738.1 hypothetical protein Csa_003101 [Cucumis sativus]3.7e-4196.3Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        G+FFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

XP_008440584.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]7.5e-4297.53Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLDS+SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

XP_010646934.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera]3.6e-2870.24Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDSNSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHFFNP
        G+ FE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDSNSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHFFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KGR1 Epidermal patterning factor-like protein1.8e-4196.3Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        G+FFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

A0A1S3B112 Epidermal patterning factor-like protein3.6e-4297.53Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLDS+SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

A0A438KPW6 Epidermal patterning factor-like protein1.7e-2870.24Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDSNSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHFFNP
        G+ FE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDSNSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHFFNP

A0A5A7T0A6 Epidermal patterning factor-like protein3.6e-4297.53Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA RLDS+SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

F6HJL0 Epidermal patterning factor-like protein1.7e-2870.24Show/hide
Query:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDSNSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHFFNP
        G+ FE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HFFNP
Subjt:  GIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAG-RLDSNSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHFFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 39.0e-0635.29Show/hide
Query:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRC
        + R+GS PPSC  KC  C PC A+Q P++          S++P            Y+ Y+P GW+C C
Subjt:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRC

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.2e-0533.33Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG     +                     Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 14.9e-2056.25Show/hide
Query:  EDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--GRLDSNSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP
        EDK RLGSTPPSCHN+CN CHPCMA+QVP++P R+   R++  S   +R   S ++  ++YS YKP+GWKC C  HF+NP
Subjt:  EDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--GRLDSNSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 22.1e-0735.53Show/hide
Query:  LGSTPPSCHN-KCNECHPCMAVQVPSMPG---RAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        +GS PP C   +C  C  C A+QVP+ P     +    S+S+         ++G+  + YKP+ WKC+CGN  +NP
Subjt:  LGSTPPSCHN-KCNECHPCMAVQVPSMPG---RAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related8.3e-0733.33Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG     +                     Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

AT2G30370.2 allergen-related8.3e-0733.33Show/hide
Query:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        LGS+PP C +KC  C PC  V VP  PG     +                     Y P  W+C+CGN  + P
Subjt:  LGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

AT3G13898.1 unknown protein6.4e-0735.29Show/hide
Query:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRC
        + R+GS PPSC  KC  C PC A+Q P++          S++P            Y+ Y+P GW+C C
Subjt:  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRC

AT4G37810.1 unknown protein1.5e-0835.53Show/hide
Query:  LGSTPPSCHN-KCNECHPCMAVQVPSMPG---RAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
        +GS PP C   +C  C  C A+QVP+ P     +    S+S+         ++G+  + YKP+ WKC+CGN  +NP
Subjt:  LGSTPPSCHN-KCNECHPCMAVQVPSMPG---RAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP

AT5G10310.1 unknown protein3.5e-2156.25Show/hide
Query:  EDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--GRLDSNSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP
        EDK RLGSTPPSCHN+CN CHPCMA+QVP++P R+   R++  S   +R   S ++  ++YS YKP+GWKC C  HF+NP
Subjt:  EDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRA--GRLDSNSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTTTGTGTTTTCTTTTTCTTGGCCGTCAGAATCAGACTAAGGGTTCTAGAGTTGAGTTTGCTCACTGCGTCTCAGGCTCTTTTTCTTGGAGTTCGGGCATATT
TTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCAGGCCGCGCCG
GCCGGTTGGATTCGAACTCGGCTTTGCCTATGAGATTTTTTGACTCGTCTTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGGTGTGGAAAT
CACTTCTTCAATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTTTGTGTTTTCTTTTTCTTGGCCGTCAGAATCAGACTAAGGGTTCTAGAGTTGAGTTTGCTCACTGCGTCTCAGGCTCTTTTTCTTGGAGTTCGGGCATATT
TTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCAGGCCGCGCCG
GCCGGTTGGATTCGAACTCGGCTTTGCCTATGAGATTTTTTGACTCGTCTTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGGTGTGGAAAT
CACTTCTTCAATCCTTAG
Protein sequenceShow/hide protein sequence
MLLLCFLFLGRQNQTKGSRVEFAHCVSGSFSWSSGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRAGRLDSNSALPMRFFDSSSQGNRYSFYKPLGWKCRCGN
HFFNP