; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016550 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016550
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPolyadenylate-binding protein 2-like
Genome locationChr03:5852509..5856056
RNA-Seq ExpressionHG10016550
SyntenyHG10016550
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036316.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa]8.2e-11198.11Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMS ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQE+KEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYV PYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]3.9e-10593.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+ ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQE+KEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYV PYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

XP_004143458.1 polyadenylate-binding protein 3 isoform X1 [Cucumis sativus]3.1e-11097.17Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMS  DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQE+KEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYV PYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

XP_022132734.1 polyadenylate-binding protein 3-like isoform X1 [Momordica charantia]1.4e-10594.81Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEE D+DMS ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQENKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYV PYFYSPY GYGK P
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRR M+YMPYY
Subjt:  RFRRPMRYMPYY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]3.1e-11097.64Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGDIDMS ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQE+KEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRY+PYMGYRSRRPYV PYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein1.5e-11097.17Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMS  DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQE+KEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYV PYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like4.0e-11198.11Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEGDIDMS ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQE+KEEADSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYV PYFYSPYGGYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X16.5e-10694.81Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEE D+DMS ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQENKEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYV PYFYSPY GYGK P
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        RFRR M+YMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like1.9e-10593.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DM+ ADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+ VSQE+KEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYV PYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like2.5e-10593.4Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEEGD+DMS ADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP G+AVSQE+KEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP
        QHFQSCGTVNRVTILTDKFG PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYV PYFYSPY GYGKTP
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTP

Query:  RFRRPMRYMPYY
        R+RRPMRYMPYY
Subjt:  RFRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 28.4e-3453.45Show/hide
Query:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++         +KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVAPY
        GHPKGFAY+EF E   V  ALLLN S LH R LKV  KRTNVPGM +   +     R     GYR R    APY
Subjt:  GHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVAPY

Q28165 Polyadenylate-binding protein 29.3e-3346.77Show/hide
Query:  GGEIPVEEGDIDMSTADDDAIK--ELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQENKEEADSRSVFVGNVDYACTPEEVQQHF
        G +   EE  +      D AI+  EL+ +K R++EMEEEA  L+E+Q +VEK+M  +  P G+A    +S E K EAD+RS++VGNVDY  T EE++ HF
Subjt:  GGEIPVEEGDIDMSTADDDAIK--ELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSA----VSQENKEEADSRSVFVGNVDYACTPEEVQQHF

Query:  QSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTPRF
          CG+VNRVTIL DKF GHPKGFAY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+      R  P   YR+R           Y G+   PR 
Subjt:  QSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTPRF

Query:  R
        R
Subjt:  R

Q93VI4 Polyadenylate-binding protein 11.2e-6764.91Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------STADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSR
        +E+EHEVYGGEIP  EEG++D            + A D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSR
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------STADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP

Query:  YVAPYFYSPYGGYGKTPRFRRPMRYMPY
         V   FY PY  YG+ PRFRRPMRY PY
Subjt:  YVAPYFYSPYGGYGKTPRFRRPMRYMPY

Q9FJN9 Polyadenylate-binding protein 27.0e-8978.73Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNV
        MEEEEHEVYGGEIP              D+DM+ ADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP+++PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFY

Query:  SPYGGYGKTPRFRRPMRYMPY
        SPY GYGK PRFRRPMRYMPY
Subjt:  SPYGGYGKTPRFRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 39.8e-9181.11Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + DIDMS AD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+V PYFYSPY 
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYG

Query:  GYGKTPRFRRPMRYMPY
        GYGK PRFRRPMRYMPY
Subjt:  GYGKTPRFRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-9281.11Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + DIDMS AD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+V PYFYSPY 
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYG

Query:  GYGKTPRFRRPMRYMPY
        GYGK PRFRRPMRYMPY
Subjt:  GYGKTPRFRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-8380.3Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + DIDMS AD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+V PYFYSPY 
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYG

Query:  GYG
        GYG
Subjt:  GYG

AT5G51120.1 polyadenylate-binding protein 18.3e-6964.91Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------STADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSR
        +E+EHEVYGGEIP  EEG++D            + A D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSR
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------STADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP

Query:  YVAPYFYSPYGGYGKTPRFRRPMRYMPY
         V   FY PY  YG+ PRFRRPMRY PY
Subjt:  YVAPYFYSPYGGYGKTPRFRRPMRYMPY

AT5G51120.2 polyadenylate-binding protein 11.5e-6255.09Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------STADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +E+EHEVYGGEIP  EEG++D            + A D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------STADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESE
                           +   S VS   KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNESE
Subjt:  -------------------DPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESE

Query:  LHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTPRFRRPMRYMPY
        LHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P V   FY PY  YG+ PRFRRPMRY PY
Subjt:  LHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTPRFRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-9078.73Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNV
        MEEEEHEVYGGEIP              D+DM+ ADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP+++PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFY

Query:  SPYGGYGKTPRFRRPMRYMPY
        SPY GYGK PRFRRPMRYMPY
Subjt:  SPYGGYGKTPRFRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTACCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAA
GAAGCGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAAGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCTGGTTCGGCTGTAAGTC
AAGAAAACAAAGAGGAGGCAGATTCGCGATCCGTGTTTGTTGGCAACGTTGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAAC
AGGGTTACGATTCTCACGGATAAATTTGGTCACCCCAAGGGCTTCGCTTATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTT
GCATGGAAGACAATTGAAGGTTCAACAAAAGCGAACAAATGTTCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGATCCAGGAGGCCTT
ACGTGGCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAGACGCCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTACCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAA
GAAGCGATTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAAGTAGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCTGGTTCGGCTGTAAGTC
AAGAAAACAAAGAGGAGGCAGATTCGCGATCCGTGTTTGTTGGCAACGTTGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAAC
AGGGTTACGATTCTCACGGATAAATTTGGTCACCCCAAGGGCTTCGCTTATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTT
GCATGGAAGACAATTGAAGGTTCAACAAAAGCGAACAAATGTTCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGATCCAGGAGGCCTT
ACGTGGCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAGACGCCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAG
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEEGDIDMSTADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQENKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVN
RVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVAPYFYSPYGGYGKTPRFRRPMRYMPYY