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HG10016647 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016647
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Genome locationChr03:6761568..6764711
RNA-Seq ExpressionHG10016647
SyntenyHG10016647
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domainsIPR006885 - NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial
IPR038532 - NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008440406.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis melo]1.4e-6683.97Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW  G   R  +APL RSF+TDSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINF+STQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPP-EANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV          KAYADNFKWKGPP EA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPP-EANEA

XP_022132610.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Momordica charantia]1.2e-6885.16Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG LAPLCRSF+ DSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGW+YV          VKAYADNFKWKGPPEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA

XP_022962977.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata]4.5e-6883.87Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW +G   RG +APLCRSF+ DSLV+VKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV          KAYADNFKWKG PE  EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPPEANEA

XP_022977437.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima]1.9e-6681.94Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG +APLCRSF++DSLVQ+KPGEIGMV+GIP+EHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAK FA+KHGWEYV          VKAYADNFKWKG PEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA

XP_038881462.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida]3.7e-7085.81Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW  G   RG +APLCRSF+TDSLVQVKPGEIGMV+GIPEEHLTRRV+IYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYV          VKAYADNFKWKGPPEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA

TrEMBL top hitse value%identityAlignment
A0A1S3B1N9 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial7.0e-6783.97Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW  G   R  +APL RSF+TDSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINF+STQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPP-EANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV          KAYADNFKWKGPP EA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPP-EANEA

A0A5D3CP24 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial7.0e-6783.97Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW  G   R  +APL RSF+TDSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINF+STQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPP-EANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV          KAYADNFKWKGPP EA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPP-EANEA

A0A6J1BSY3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial5.7e-6985.16Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG LAPLCRSF+ DSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGW+YV          VKAYADNFKWKGPPEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYV----------VKAYADNFKWKGPPEANEA

A0A6J1HE01 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial2.2e-6883.87Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW +G   RG +APLCRSF+ DSLV+VKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV          KAYADNFKWKG PE  EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPPEANEA

A0A6J1KR46 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial2.2e-6883.87Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW +G   RG +APLCRSF+ DSLV+VKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV          KAYADNFKWKG PE  EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVV----------KAYADNFKWKGPPEANEA

SwissProt top hitse value%identityAlignment
Q02375 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial2.3e-1943.64Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------
        +I  + G+PEEH+ TR+  I+ PAR   Q G     KWK+ F + ++WENPLMGW ST DP +++    L+F ++E A AFAEK+GW Y V         
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------

Query:  -KAYADNFKW
         K+Y  NF W
Subjt:  -KAYADNFKW

Q5XIF3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial3.6e-2044.55Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------
        ++  + G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST DP +++    L+F ++E A AFAEKHGW Y V         
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------

Query:  -KAYADNFKW
         K+Y  NF W
Subjt:  -KAYADNFKW

Q66XS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial3.1e-1943.64Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------
        +I  + G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW+ST DP +++    L+F ++E A AFAEK+GW + V         
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------

Query:  -KAYADNFKW
         K+Y  NF W
Subjt:  -KAYADNFKW

Q9CXZ1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial1.8e-1944.55Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------
        +I  + G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST DP +++    L+F ++E A AFAEK+GW Y V         
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVV---------

Query:  -KAYADNFKW
         K+Y  NF W
Subjt:  -KAYADNFKW

Q9FJW4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial4.8e-4968.89Show/hide
Query:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA
        L  + R FATD++V+   K GEIG V+GIPEEHL+R+V+IYSPARTA+Q GSGK+GKWKINF+ST KWENPLMGWTSTGDPYA+VGDSAL+FDSEEAAK+
Subjt:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA

Query:  FAEKHGWEY----------VVKAYADNFKWKGPPE
        FAE+HGW+Y           VK+Y+DNFKWKG P+
Subjt:  FAEKHGWEY----------VVKAYADNFKWKGPPE

Arabidopsis top hitse value%identityAlignment
AT5G67590.1 NADH-ubiquinone oxidoreductase-related3.4e-5068.89Show/hide
Query:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA
        L  + R FATD++V+   K GEIG V+GIPEEHL+R+V+IYSPARTA+Q GSGK+GKWKINF+ST KWENPLMGWTSTGDPYA+VGDSAL+FDSEEAAK+
Subjt:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA

Query:  FAEKHGWEY----------VVKAYADNFKWKGPPE
        FAE+HGW+Y           VK+Y+DNFKWKG P+
Subjt:  FAEKHGWEY----------VVKAYADNFKWKGPPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACTCCTTGCAGCGAATCTGGAGACAGGGATATACTCGCCGTGGTAATCTGGCTCCTCTCTGCAGGTCATTCGCTACCGATTCCTTGGTTCAAGTCAAGCCCGG
CGAGATCGGTATGGTCGCTGGAATTCCAGAGGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCAGCTAGAACTGCATCCCAACAAGGATCAGGCAAGGTTGGCAAGT
GGAAAATCAATTTTATGTCAACACAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCAACTGGGGACCCCTATGCCCATGTAGGGGATTCTGCACTGTCTTTTGATAGT
GAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTGAAGGCATATGCGGACAATTTCAAATGGAAGGGCCCTCCTGAAGCCAACGAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACTCCTTGCAGCGAATCTGGAGACAGGGATATACTCGCCGTGGTAATCTGGCTCCTCTCTGCAGGTCATTCGCTACCGATTCCTTGGTTCAAGTCAAGCCCGG
CGAGATCGGTATGGTCGCTGGAATTCCAGAGGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCAGCTAGAACTGCATCCCAACAAGGATCAGGCAAGGTTGGCAAGT
GGAAAATCAATTTTATGTCAACACAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCAACTGGGGACCCCTATGCCCATGTAGGGGATTCTGCACTGTCTTTTGATAGT
GAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTGAAGGCATATGCGGACAATTTCAAATGGAAGGGCCCTCCTGAAGCCAACGAGGCTTAA
Protein sequenceShow/hide protein sequence
MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDS
EEAAKAFAEKHGWEYVVKAYADNFKWKGPPEANEA