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HG10016672 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016672
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr03:6985003..6985382
RNA-Seq ExpressionHG10016672
SyntenyHG10016672
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594990.1 Ribonuclease III domain-containing protein RNC1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0472.09Show/hide
Query:  RFKAASDKKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
        RFK AS      A+IPMEKLP+  EKE+MRMAMLKHEETFKQQ
Subjt:  RFKAASDKKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
KAG7034303.1 hypothetical protein SDJN02_04030 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-1385.71Show/hide
Query:  DCFGDSRFKAASDKKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
        DC GDSRF  AS K+ KGAEIPMEKLPKA+EKEYMRMAMLKHEETFKQQ
Subjt:  DCFGDSRFKAASDKKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
XP_022132522.1 uncharacterized protein LOC111005359 [Momordica charantia]2.4e-04100Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKLPKAYEKEYMRMAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
XP_038883305.1 uncharacterized protein LOC120074293 isoform X1 [Benincasa hispida]1.4e-09100Show/hide
Query:  KKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
        KKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
Subjt:  KKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQ
XP_038883306.1 uncharacterized protein LOC120074293 isoform X2 [Benincasa hispida]2.4e-04100Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKLPKAYEKEYMRMAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
TrEMBL top hitse value%identityAlignment
A0A0A0KIH1 Uncharacterized protein1.2e-0493.33Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQNPE
        MEKLPKAYEKEYMRMAMLKHEETFKQQ  E
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQNPE
A0A1S3B1P5 uncharacterized protein LOC1034848361.2e-04100Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKLPKAYEKEYMRMAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
A0A6J1BU22 uncharacterized protein LOC1110053591.2e-04100Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKLPKAYEKEYMRMAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
A0A6J1GEC8 uncharacterized protein LOC1114531824.4e-0496.3Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKLPKA+EKEYMRMAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
A0A6J1IUL1 uncharacterized protein LOC1114787144.4e-0496.3Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKLPKA+EKEYMRMAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G67390.1 unknown protein5.7e-0474.07Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKL   Y+K+ M+MAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
AT5G67390.2 unknown protein5.7e-0474.07Show/hide
Query:  MEKLPKAYEKEYMRMAMLKHEETFKQQ
        MEKL   Y+K+ M+MAMLKHEETFKQQ
Subjt:  MEKLPKAYEKEYMRMAMLKHEETFKQQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGCTAGTGGTACTTCAAGGAAATATAAAATTGATCAAACCGGACCTTTAGACTGTTTTGGGGATTCAAGATTCAAGGCTGCATCAGATAAAAAAGTAAAGGG
GGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCATATGAAAAGGAGTACATGAGGATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGAACCCAGAACAACCAT
GCAATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGCTAGTGGTACTTCAAGGAAATATAAAATTGATCAAACCGGACCTTTAGACTGTTTTGGGGATTCAAGATTCAAGGCTGCATCAGATAAAAAAGTAAAGGG
GGCTGAAATCCCAATGGAAAAGCTGCCTAAGGCATATGAAAAGGAGTACATGAGGATGGCCATGTTAAAGCATGAAGAAACATTCAAACAACAGAACCCAGAACAACCAT
GCAATGATTGA
Protein sequenceShow/hide protein sequence
MALASGTSRKYKIDQTGPLDCFGDSRFKAASDKKVKGAEIPMEKLPKAYEKEYMRMAMLKHEETFKQQNPEQPCND