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HG10016682 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016682
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLate embryogenesis abundant protein
Genome locationChr03:7052401..7052670
RNA-Seq ExpressionHG10016682
SyntenyHG10016682
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12837.1 Late embryogenesis abundant protein, LEA-18 [Cucumis melo var. makuwa]1.7e-3085.56Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP
        M+KR+ DQ Q Q EE KSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP

XP_016899224.1 PREDICTED: uncharacterized protein LOC107990449 [Cucumis melo]1.2e-3187.78Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP
        M+KRE DQ Q Q EERKSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]1.4e-2781.11Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP
        MDKRE DQP++QQ ERKSE ++ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA+ SSVINRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]5.6e-2983.15Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP
        MDKRE DQP++QQ ERKS  E+ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP RGGGGG TDAPTLSGDAV SSVINRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]9.9e-3491.01Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP
        MDKRETDQ Q+QQEERKS RE+ERSEGIPLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGRG GGGPTDAPTLSGDA ASSVINRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein1.6e-2686.42Show/hide
Query:  MDKRETDQPQQQQEE-RKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVAS
        M+KRE DQ Q Q +E RKSEREKERSE IPLESSPYVNY+DLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDA A+
Subjt:  MDKRETDQPQQQQEE-RKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVAS

A0A1S4DTA9 uncharacterized protein LOC1079904495.8e-3287.78Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP
        M+KRE DQ Q Q EERKSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-188.4e-3185.56Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP
        M+KR+ DQ Q Q EE KSEREKERSEG+PLESSPYVNYKDLEDYK+QAYGTQGHLQPKPGR GGGGGPTDAPTLSGDA ASSV NRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP

A0A6J1HDU8 uncharacterized protein LOC1114630781.9e-2780.9Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP
        MDKRE DQP++QQ ERKS  E+ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+ KP R GGGG TDAPTLSGDAV SSVINRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP

A0A6J1KLI9 uncharacterized protein LOC1114968246.7e-2881.11Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP
        MDKRE DQP++QQ ERKSE ++ER EGIPLE+SPYVNYKDLEDYKNQAYG QGHL+PKP R GGGGG TDAPTLSGDA+ SSVINRQG P
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGR-GGGGGPTDAPTLSGDAVASSVINRQGAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 62.0e-0841.94Show/hide
Query:  QQQQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGAP
        + Q++   +E+E +  +   LES  +PY++Y +LEDYK + YG QGH +PK G GGG   TDAPT SG           D  ++  INRQG P
Subjt:  QQQQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGAP

AT2G23110.2 Late embryogenesis abundant protein, group 62.0e-0841.94Show/hide
Query:  QQQQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGAP
        + Q++   +E+E +  +   LES  +PY++Y +LEDYK + YG QGH +PK G GGG   TDAPT SG           D  ++  INRQG P
Subjt:  QQQQEERKSEREKERSEGIPLES--SPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSG-----------DAVASSVINRQGAP

AT2G23120.1 Late embryogenesis abundant protein, group 64.2e-0644.44Show/hide
Query:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASS
        M+  +T        E+K+E+ K+    +P + SPY+    LEDYK +AYG +GH +P PG GGG   TDAPT SGDA A++
Subjt:  MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASS

AT2G33690.1 Late embryogenesis abundant protein, group 64.6e-1356.45Show/hide
Query:  EKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSV
        + E  + +PLE+SPY  Y+D+EDYK  AYGT GH   KPG   GGG TDAPT SGDA  S++
Subjt:  EKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCGCGAGACCGATCAGCCGCAACAGCAACAAGAGGAGAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAGGGCATTCCGTTGGAGAGCAGCCCGTACGTGAA
TTATAAAGATTTGGAAGATTACAAAAACCAAGCCTACGGAACCCAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGTGGTCCCACCGACGCCCCCACTCTCT
CCGGTGACGCCGTCGCTTCGTCGGTGATTAACCGCCAAGGAGCACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGCGCGAGACCGATCAGCCGCAACAGCAACAAGAGGAGAGGAAAAGCGAAAGGGAAAAGGAGAGATCAGAGGGCATTCCGTTGGAGAGCAGCCCGTACGTGAA
TTATAAAGATTTGGAAGATTACAAAAACCAAGCCTACGGAACCCAAGGCCATCTTCAGCCCAAGCCCGGCCGTGGCGGCGGCGGTGGTCCCACCGACGCCCCCACTCTCT
CCGGTGACGCCGTCGCTTCGTCGGTGATTAACCGCCAAGGAGCACCCTGA
Protein sequenceShow/hide protein sequence
MDKRETDQPQQQQEERKSEREKERSEGIPLESSPYVNYKDLEDYKNQAYGTQGHLQPKPGRGGGGGPTDAPTLSGDAVASSVINRQGAP