; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10016696 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10016696
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein ELI1
Genome locationChr03:7176616..7178544
RNA-Seq ExpressionHG10016696
SyntenyHG10016696
Gene Ontology termsGO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12851.1 pentatricopeptide repeat-containing protein ELI1 [Cucumis melo var. makuwa]4.4e-7134.89Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSSFFTASPPSPP IFTTNR SV PSSSSTARTS RFQQVE  RF LLID+SKSV  LLQIHASLLR GLYHN ILNFKLQRSYAALGRLD SV VFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        TFDEP+VFSFSAIIHSHVQ RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG  +DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQ LEVHSEKLAIAFGLISTKPGT IKIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCH VMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

XP_004141894.1 pentatricopeptide repeat-containing protein ELI1, chloroplastic [Cucumis sativus]7.5e-7134.58Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSS FTAS PSPP IFTTNRSSVLPSSSSTARTSDRFQ+VE  RF  LID+SKSV  LLQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        TFDEP+VFSFSAIIHSHVQ RLFDRA GYYSQML+ GVEPN FTFSSVLKSC LE GK LHCQAIKLG  +DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQSLEVHSEKLAIAFGLISTKPGT +KIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCH VMK+ISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

XP_022132503.1 pentatricopeptide repeat-containing protein ELI1, chloroplastic [Momordica charantia]7.5e-7133.8Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSSFFTA PPSPPP+ TTNRSS+LPSS STA TSDR QQVE  RF  LID+S+SV  LLQIHASLLR GLYH+PILNFKLQRSYA +GRLDYSVAVFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        T D+P+VFS+S+IIHSH QC LFD+AL +YSQMLTRGVEPNVFTFSSVLKSC LEPGKALHCQAIKLGFD+DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQSLEVHSEKLAIAFGLIST+PGT +KIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCHAVMKLIS+ITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

XP_038882525.1 pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida]4.6e-7689.02Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        M SSSF TASPP PPPIFTTNRSSVLPSSSSTARTSD FQQVE  RF LLID+SKS+  LLQIHASLLR  LYHNPILNFKLQRSYAALGRLDYSVAVFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL
        T DEP+VFSFSAIIHSHVQCRLFD+ALGYYSQMLTRGVEPNVFTFSSVLKSC LEPGK LHCQAIKLGFD+DL
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL

XP_038882525.1 pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida]6.7e-3594.94Show/hide
Query:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        EEQKEQSLEVHSEKLAIAFGLIST+PGT IKIVKNLRVC DCHAVMKLISEIT RKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

XP_038882525.1 pentatricopeptide repeat-containing protein ELI1, chloroplastic [Benincasa hispida]1.4e-7235.05Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSSFFTASPPSPP IFTTNRSSV PSSSSTA+TS RFQQVE  RF LLID+SKSV  LLQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        TFDEP+VFSFSAIIHSHVQ RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG  +DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQ LEVHSEKLAIAFGLISTKPGT IKIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCH VMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

TrEMBL top hitse value%identityAlignment
A0A0A0KGF1 DYW_deaminase domain-containing protein3.6e-7134.58Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSS FTAS PSPP IFTTNRSSVLPSSSSTARTSDRFQ+VE  RF  LID+SKSV  LLQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        TFDEP+VFSFSAIIHSHVQ RLFDRA GYYSQML+ GVEPN FTFSSVLKSC LE GK LHCQAIKLG  +DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQSLEVHSEKLAIAFGLISTKPGT +KIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCH VMK+ISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

A0A1S3B0U7 pentatricopeptide repeat-containing protein ELI1, chloroplastic6.6e-7335.05Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSSFFTASPPSPP IFTTNRSSV PSSSSTA+TS RFQQVE  RF LLID+SKSV  LLQIHASLLR GLYHNPILNFKLQRSYAALGRLD SV VFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        TFDEP+VFSFSAIIHSHVQ RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG  +DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQ LEVHSEKLAIAFGLISTKPGT IKIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCH VMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

A0A5D3CM09 Pentatricopeptide repeat-containing protein ELI12.1e-7134.89Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSSFFTASPPSPP IFTTNR SV PSSSSTARTS RFQQVE  RF LLID+SKSV  LLQIHASLLR GLYHN ILNFKLQRSYAALGRLD SV VFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        TFDEP+VFSFSAIIHSHVQ RLFDRA GYYSQML+RGVEPN FTFSSVLKSC LE GK LHCQAIKLG  +DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQ LEVHSEKLAIAFGLISTKPGT IKIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCH VMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

A0A6J1BWF5 pentatricopeptide repeat-containing protein ELI1, chloroplastic3.6e-7133.8Show/hide
Query:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN
        MSSSSFFTA PPSPPP+ TTNRSS+LPSS STA TSDR QQVE  RF  LID+S+SV  LLQIHASLLR GLYH+PILNFKLQRSYA +GRLDYSVAVFN
Subjt:  MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFN

Query:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------
        T D+P+VFS+S+IIHSH QC LFD+AL +YSQMLTRGVEPNVFTFSSVLKSC LEPGKALHCQAIKLGFD+DL                           
Subjt:  TFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL---------------------------

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Query:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR
                                                                       EEQKEQSLEVHSEKLAIAFGLIST+PGT +KIVKNLR
Subjt:  ---------------------------------------------------------------EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLR

Query:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VCSDCHAVMKLIS+ITGRKIVMRDRNRFHHFEDGLCSCGDYW
Subjt:  VCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

A0A6J1GED1 pentatricopeptide repeat-containing protein ELI1, chloroplastic1.2e-6984.8Show/hide
Query:  SSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTF
        +SSF TASP SPPPIFTTN SSVL SS STARTSDRFQQVE   F +LID+SKSVD LLQIHAS+LR GLYHNPILNFKLQRSYAALGRLDYSVAVFNT 
Subjt:  SSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTF

Query:  DEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL
        DEP+VFSFSAIIHSHVQC LFDRAL YY QML  GVEPNVFTFSSVLKSC LE GK LHCQAIKLGFD+DL
Subjt:  DEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADL

A0A6J1GED1 pentatricopeptide repeat-containing protein ELI1, chloroplastic5.5e-3592.41Show/hide
Query:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        EEQKE+SLEVHSEKLA+AFGLIST+PGT IKIVKNLRVCSDCHAVMKLIS+ITGRKIVMRDRNRFHHFEDGLCSCG YW
Subjt:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

SwissProt top hitse value%identityAlignment
Q9FG16 Pentatricopeptide repeat-containing protein At5g065401.8e-3069.05Show/hide
Query:  FDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        FD D EE+KE S+ +HSEKLAIA+G++ TKPGT I+IVKNLRVC DCH V KLISE+ GR++++RDRNRFHHF +G+CSC DYW
Subjt:  FDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

Q9LW32 Pentatricopeptide repeat-containing protein At3g26782, mitochondrial4.3e-2954.95Show/hide
Query:  VFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHF
        ++ F + L   LLE G   +  ++    D   EE+KE +L VHSEKLAIAFG+++T PG+ + +VKNLRVCSDCH V+KLIS+I  R+ V+RD  RFHHF
Subjt:  VFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHF

Query:  EDGLCSCGDYW
        +DG CSCGDYW
Subjt:  EDGLCSCGDYW

Q9SMZ2 Pentatricopeptide repeat-containing protein At4g331704.1e-2764.56Show/hide
Query:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        EE+KE++L  HSEKLA+AFGL+ST P T I+++KNLRVC DCH  MK I+++  R+IV+RD NRFH F+DG+CSCGDYW
Subjt:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

Q9SUH6 Pentatricopeptide repeat-containing protein At4g307005.1e-3043.53Show/hide
Query:  YSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF---SSVLKSCLLEPGKALHCQAIKLGFDADL--------EEQKEQSLE
        Y V + N       +  +A +    + R   +A GY   ++  G  P+VFT    S      + E  + L  +  + G+  +         EE++E  ++
Subjt:  YSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF---SSVLKSCLLEPGKALHCQAIKLGFDADL--------EEQKEQSLE

Query:  VHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VHSE+LAIAFGLI+T+PGT I+I+KNLRVC DCH V KLIS+IT R IV+RD NRFHHF+DG+CSCGDYW
Subjt:  VHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

Q9SZT8 Pentatricopeptide repeat-containing protein ELI1, chloroplastic5.9e-3444.5Show/hide
Query:  IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHC
        I  ++  SG+Y        L   YA++G  +    V N   E  +     I    ++ ++ +   G      ++ +   +   S  +KS    P      
Subjt:  IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHC

Query:  QAIKLGFDADLEE-QKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        Q        DLEE +KEQSL+VHSE+LAIA+GLISTKPG+ +KI KNLRVCSDCH V KLIS+ITGRKIVMRDRNRFHHF DG CSCGD+W
Subjt:  QAIKLGFDADLEE-QKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

Q9SZT8 Pentatricopeptide repeat-containing protein ELI1, chloroplastic6.1e-2339.33Show/hide
Query:  LPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLY---HNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL
        LP +  +   + RF+    ++  +LID+S+SVD +LQIHA++LR  L      P+LN KL R+YA+ G++ +S+A+F+   +P +F F+A I++     L
Subjt:  LPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLY---HNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL

Query:  FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDAD
         D+A   Y Q+L+  + PN FTFSS+LKSC  + GK +H   +K G   D
Subjt:  FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDAD

Arabidopsis top hitse value%identityAlignment
AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.1e-3054.95Show/hide
Query:  VFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHF
        ++ F + L   LLE G   +  ++    D   EE+KE +L VHSEKLAIAFG+++T PG+ + +VKNLRVCSDCH V+KLIS+I  R+ V+RD  RFHHF
Subjt:  VFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHF

Query:  EDGLCSCGDYW
        +DG CSCGDYW
Subjt:  EDGLCSCGDYW

AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein3.6e-3143.53Show/hide
Query:  YSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF---SSVLKSCLLEPGKALHCQAIKLGFDADL--------EEQKEQSLE
        Y V + N       +  +A +    + R   +A GY   ++  G  P+VFT    S      + E  + L  +  + G+  +         EE++E  ++
Subjt:  YSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTF---SSVLKSCLLEPGKALHCQAIKLGFDADL--------EEQKEQSLE

Query:  VHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        VHSE+LAIAFGLI+T+PGT I+I+KNLRVC DCH V KLIS+IT R IV+RD NRFHHF+DG+CSCGDYW
Subjt:  VHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.9e-2864.56Show/hide
Query:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        EE+KE++L  HSEKLA+AFGL+ST P T I+++KNLRVC DCH  MK I+++  R+IV+RD NRFH F+DG+CSCGDYW
Subjt:  EEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.2e-3544.5Show/hide
Query:  IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHC
        I  ++  SG+Y        L   YA++G  +    V N   E  +     I    ++ ++ +   G      ++ +   +   S  +KS    P      
Subjt:  IHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHC

Query:  QAIKLGFDADLEE-QKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        Q        DLEE +KEQSL+VHSE+LAIA+GLISTKPG+ +KI KNLRVCSDCH V KLIS+ITGRKIVMRDRNRFHHF DG CSCGD+W
Subjt:  QAIKLGFDADLEE-QKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.3e-2439.33Show/hide
Query:  LPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLY---HNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL
        LP +  +   + RF+    ++  +LID+S+SVD +LQIHA++LR  L      P+LN KL R+YA+ G++ +S+A+F+   +P +F F+A I++     L
Subjt:  LPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLY---HNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAIIHSHVQCRL

Query:  FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDAD
         D+A   Y Q+L+  + PN FTFSS+LKSC  + GK +H   +K G   D
Subjt:  FDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDAD

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-3169.05Show/hide
Query:  FDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW
        FD D EE+KE S+ +HSEKLAIA+G++ TKPGT I+IVKNLRVC DCH V KLISE+ GR++++RDRNRFHHF +G+CSC DYW
Subjt:  FDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMKLISEITGRKIVMRDRNRFHHFEDGLCSCGDYW

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein3.8e-0426.32Show/hide
Query:  LLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAII-----HSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSC----LLEPG
        +++S +  N IL   L   +   G ++ ++ VF    E    S+S+II     H H       +A+ Y+SQM++ G  P   TF++VL +C    L+E G
Subjt:  LLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSFSAII-----HSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSC----LLEPG

Query:  KALH-----------------CQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRV
          ++                 C    LG    L E +   L++H +  A   G +      A KI KN  V
Subjt:  KALH-----------------CQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTTCTTCCTTTTTCACAGCGTCACCTCCATCGCCGCCGCCAATTTTCACCACTAACCGTTCATCTGTCTTACCGTCTTCTTCTTCCACCGCCAGAACCTCCGA
TCGTTTCCAACAAGTAGAACTACAAAGGTTCACCTTACTAATCGATAGATCGAAATCCGTCGACTGCCTGCTTCAAATCCACGCTTCTCTTCTCCGCAGTGGGCTTTACC
ACAACCCCATCTTAAATTTCAAGCTCCAACGCTCATACGCCGCTCTCGGACGCCTTGATTACTCGGTGGCTGTTTTTAACACCTTCGATGAACCCAGTGTATTTTCATTT
AGTGCAATTATCCATAGCCACGTACAATGTCGATTATTTGACCGAGCTCTCGGTTACTATTCGCAAATGCTAACCCGTGGTGTGGAGCCCAATGTTTTCACCTTCTCGTC
AGTCTTGAAATCCTGCTTGCTCGAACCCGGAAAGGCCCTCCATTGCCAAGCAATAAAGCTGGGGTTCGATGCTGATTTGGAGGAACAAAAGGAGCAATCGCTCGAAGTTC
ACAGTGAGAAGCTTGCTATTGCCTTTGGGCTTATCAGTACTAAACCAGGCACCGCCATCAAGATTGTGAAGAACCTCCGAGTTTGTTCAGATTGCCATGCCGTAATGAAG
TTGATATCAGAAATCACTGGACGTAAAATTGTAATGAGAGACCGGAATCGGTTCCATCACTTTGAAGATGGATTATGTTCTTGTGGAGATTATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCTTCTTCCTTTTTCACAGCGTCACCTCCATCGCCGCCGCCAATTTTCACCACTAACCGTTCATCTGTCTTACCGTCTTCTTCTTCCACCGCCAGAACCTCCGA
TCGTTTCCAACAAGTAGAACTACAAAGGTTCACCTTACTAATCGATAGATCGAAATCCGTCGACTGCCTGCTTCAAATCCACGCTTCTCTTCTCCGCAGTGGGCTTTACC
ACAACCCCATCTTAAATTTCAAGCTCCAACGCTCATACGCCGCTCTCGGACGCCTTGATTACTCGGTGGCTGTTTTTAACACCTTCGATGAACCCAGTGTATTTTCATTT
AGTGCAATTATCCATAGCCACGTACAATGTCGATTATTTGACCGAGCTCTCGGTTACTATTCGCAAATGCTAACCCGTGGTGTGGAGCCCAATGTTTTCACCTTCTCGTC
AGTCTTGAAATCCTGCTTGCTCGAACCCGGAAAGGCCCTCCATTGCCAAGCAATAAAGCTGGGGTTCGATGCTGATTTGGAGGAACAAAAGGAGCAATCGCTCGAAGTTC
ACAGTGAGAAGCTTGCTATTGCCTTTGGGCTTATCAGTACTAAACCAGGCACCGCCATCAAGATTGTGAAGAACCTCCGAGTTTGTTCAGATTGCCATGCCGTAATGAAG
TTGATATCAGAAATCACTGGACGTAAAATTGTAATGAGAGACCGGAATCGGTTCCATCACTTTGAAGATGGATTATGTTCTTGTGGAGATTATTGGTGA
Protein sequenceShow/hide protein sequence
MSSSSFFTASPPSPPPIFTTNRSSVLPSSSSTARTSDRFQQVELQRFTLLIDRSKSVDCLLQIHASLLRSGLYHNPILNFKLQRSYAALGRLDYSVAVFNTFDEPSVFSF
SAIIHSHVQCRLFDRALGYYSQMLTRGVEPNVFTFSSVLKSCLLEPGKALHCQAIKLGFDADLEEQKEQSLEVHSEKLAIAFGLISTKPGTAIKIVKNLRVCSDCHAVMK
LISEITGRKIVMRDRNRFHHFEDGLCSCGDYW